prot_H-paniculata_contig5522.13002.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5522.13002.1
Unique Nameprot_H-paniculata_contig5522.13002.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length150
Homology
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BLAST of mRNA_H-paniculata_contig5522.13002.1 vs. uniprot
Match: D8LTU0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU0_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.680e-7
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0 
Query:    1 MHIVPQFF---MGARRTSAEDFLSLLQDSEELQAREVPHLAAED 41
            M +VPQ +   MG+RRTSAEDFLSLLQDSEELQAREVP +  E+
Sbjct:   18 MQVVPQHYLSLMGSRRTSAEDFLSLLQDSEELQAREVPSMQDEE 61
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5522.13002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTU0_ECTSI1.680e-770.45Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5522contigH-paniculata_contig5522:5714..7627 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5522.13002.1mRNA_H-paniculata_contig5522.13002.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5522 5714..7645 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5522.13002.1 ID=prot_H-paniculata_contig5522.13002.1|Name=mRNA_H-paniculata_contig5522.13002.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=150bp
MHIVPQFFMGARRTSAEDFLSLLQDSEELQAREVPHLAAEDTAAEDRQHR
TQSTLTECTDITSPVAAPTLSTHGSAESCGIGGASKAFSTSPTTGESGSH
NDVDDNSERKMDSAVGRTDAQHHPEDMYLIGQGGGDDDDDHEREAGGQAG
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