prot_H-paniculata_contig5521.13001.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5521.13001.1
Unique Nameprot_H-paniculata_contig5521.13001.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length411
Homology
BLAST of mRNA_H-paniculata_contig5521.13001.1 vs. uniprot
Match: D8LLH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH3_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 9.320e-37
Identity = 82/112 (73.21%), Postives = 93/112 (83.04%), Query Frame = 0
Query:   20 MEHYRKAMRDIEKERANFLAKIDLVKPSFEEQHQLDWGHRYLEEEVCLLRDEVASVSADVRQETEQLRDREIVIRSIRDEQRQQDRIKIQTLLALSQPITPDITVIFQTLGP 131
            ME Y++AMR IE+ER N L KIDLV+PSFEEQHQL+WG RY EEE+  LR EV  VS +V  ET+QLRDRE +IR+IRDEQRQ DRIKIQTLLALSQPITPDITV+FQ L P
Sbjct:    1 MECYQEAMRAIERERINVLNKIDLVQPSFEEQHQLEWGRRYQEEELLALRLEVGEVSREVEAETKQLRDREEIIRAIRDEQRQ-DRIKIQTLLALSQPITPDITVVFQALAP 111          
BLAST of mRNA_H-paniculata_contig5521.13001.1 vs. uniprot
Match: A0A6H5K070_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K070_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 3.840e-21
Identity = 120/368 (32.61%), Postives = 144/368 (39.13%), Query Frame = 0
Query:   54 LDWGHRYLEEEVCLLRDEVASVSADVRQETEQLRDREIVIRSIRDEQRQQDRIKIQTLLALSQPITPDITVIFQTLGPLA---PSAPPTPALAPTH----PQNKRGRLRPHVSPRRRHPSKTPPNRGQ--GQEEFPPPREGVXXXXXXXXXXXXXXXDVAISLSSTGRGFTAAAR--KYGFRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERSEAHERANSSSGVDRDAVSNRLQYTQDYHQHLLMRLELTQRHLVELDHLGRDYHETLRQDRQEREIQVQMQKDNAAAVVQGFGHR 410
            L WG RY EEE+  LR EV  VS +V  E +QLRDRE +IR+IRDEQRQ DRIKIQTLLALSQPITPDITV+FQ L P A   P  PP+    P      PQN R  +  + SP RR  +      G+  G+ E  P R                         + GRG   A     YG                                                                                                      R         S G  +   +NRL  T+ Y QHL  RLEL +RHL EL+ L   YHETL +D+QEREI  ++Q+DNAA VV+    R
Sbjct:   13 LQWGRRYQEEELLALRLEVGEVSGEVEAEIKQLRDREEIIRAIRDEQRQ-DRIKIQTLLALSQPITPDITVVFQALAPDACPPPLPPPSRGARPLDRSYVPQNNRRAVASN-SPSRRSVAAAAATAGRNAGRGEQRPRRRRYLNDGIGSDGCSGGEQINMEGERNAGRGEEEATGGVSYGL------------------------------------------------------------------YPGRRWTSERVGGNGGHADRRRGGREGGVPGSRRRRRPRSGDGGGSLGTRKSREANRL-CTRGYQQHLERRLELNERHLRELERLEGSYHETLTRDKQEREIHARVQRDNAARVVEALERR 311          
BLAST of mRNA_H-paniculata_contig5521.13001.1 vs. uniprot
Match: A0A835ZIT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIT2_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.070e-5
Identity = 35/94 (37.23%), Postives = 55/94 (58.51%), Query Frame = 0
Query:   37 FLAKIDLVKPSFEEQHQLDWGHRYLEEEVCLLRDEVASVSADVRQETEQLRDREIVIRSIRDEQRQQDRIKIQTLLALSQPITPDITVIFQTLG 130
            F  +I++V+PS EE+H+++W    LE E+ +   E AS+ A        +  R   I  +  EQR+ DR ++Q LLAL QP++ D+TV+F   G
Sbjct:   46 FRKQIEMVQPSQEERHRIEWQLEALERELAVASGEAASLRASTGTAGAAIAARAAAIAELLAEQRE-DRTRVQRLLALCQPVSHDVTVLFDHFG 138          
BLAST of mRNA_H-paniculata_contig5521.13001.1 vs. uniprot
Match: A0A8C5UDX7_9PASS (Coiled-coil domain containing 77 n=1 Tax=Malurus cyaneus samueli TaxID=2593467 RepID=A0A8C5UDX7_9PASS)

HSP 1 Score: 52.8 bits (125), Expect = 6.630e-5
Identity = 25/75 (33.33%), Postives = 47/75 (62.67%), Query Frame = 0
Query:   12 STSATRATMEHYRKAMRDIEKERANFLAKIDLVKPSFEEQHQLDWGHRYLEEEVCLLRDEVASVSADVRQETEQL 86
            S + ++  +EHYRK + D ++E    + K++  K ++++QHQL W  R+LEEE+  L+  ++ +   + QE EQ+
Sbjct:   32 SLNPSQELLEHYRKKIADFDEEHDELIKKLEKYKQTYDDQHQLQWEVRHLEEEIAELQKALSDMQVYLFQEREQV 106          
BLAST of mRNA_H-paniculata_contig5521.13001.1 vs. uniprot
Match: A0A7K6GSR4_9PASS (CCD77 protein (Fragment) n=3 Tax=Malurus TaxID=55806 RepID=A0A7K6GSR4_9PASS)

HSP 1 Score: 55.8 bits (133), Expect = 8.280e-5
Identity = 37/109 (33.94%), Postives = 63/109 (57.80%), Query Frame = 0
Query:   12 STSATRATMEHYRKAMRDIEKERANFLAKIDLVKPSFEEQHQLDWGHRYLEEEVCLLRDEVASVSADVRQETEQL------RDREIVIRSIRDEQRQQDRIKIQTLLAL 114
            S + ++  +EHYRK + D ++E    + K++  K ++++QHQL W  R+LEEE+  L+  ++ +   + QE EQ+       DR + IR +      +DR +IQ LLAL
Sbjct:   36 SLNPSQELLEHYRKKIADFDEEHEELIKKLEKYKQTYDDQHQLQWEVRHLEEEIAELQKALSDMQVYLFQEREQVLRLYSENDR-LKIREL------EDRKRIQQLLAL 137          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5521.13001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LLH3_ECTSI9.320e-3773.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K070_9PHAE3.840e-2132.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZIT2_9STRA1.070e-537.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8C5UDX7_9PASS6.630e-533.33Coiled-coil domain containing 77 n=1 Tax=Malurus c... [more]
A0A7K6GSR4_9PASS8.280e-533.94CCD77 protein (Fragment) n=3 Tax=Malurus TaxID=558... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..40
IPR037696Coiled-coil domain-containing protein 77PANTHERPTHR22091UNCHARACTERIZEDcoord: 15..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5521contigH-paniculata_contig5521:3173..13517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5521.13001.1mRNA_H-paniculata_contig5521.13001.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5521 3173..13517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5521.13001.1 ID=prot_H-paniculata_contig5521.13001.1|Name=mRNA_H-paniculata_contig5521.13001.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=411bp
RRSCFCCGCRNSTSATRATMEHYRKAMRDIEKERANFLAKIDLVKPSFEE
QHQLDWGHRYLEEEVCLLRDEVASVSADVRQETEQLRDREIVIRSIRDEQ
RQQDRIKIQTLLALSQPITPDITVIFQTLGPLAPSAPPTPALAPTHPQNK
RGRLRPHVSPRRRHPSKTPPNRGQGQEEFPPPREGVGVGIDGDDDSDGSG
GDVAISLSSTGRGFTAAARKYGFRQTASAREDGFRQDVCWDDDNSDGSDG
HGDSDNDDAGQRGGGPAGTGSRRASGGARRCRHSSEGGERGGREGTTGAG
AGYSSNGGGRSAGRSGGGGGRGVERSEAHERANSSSGVDRDAVSNRLQYT
QDYHQHLLMRLELTQRHLVELDHLGRDYHETLRQDRQEREIQVQMQKDNA
AAVVQGFGHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037696CCDC77