mRNA_H-paniculata_contig5521.13001.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5521.13001.1
Unique NamemRNA_H-paniculata_contig5521.13001.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5521.13001.1 vs. uniprot
Match: D8LLH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH3_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 9.320e-37
Identity = 82/112 (73.21%), Postives = 93/112 (83.04%), Query Frame = 1 
Query:   58 MEHYRKAMRDIEKERANFLAKIDLVKPSFEEQHQLDWGHRYLEEEVCLLRDEVASVSADVRQETEQLRDREIVIRSIRDEQRQQDRIKIQTLLALSQPITPDITVIFQTLGP 393
            ME Y++AMR IE+ER N L KIDLV+PSFEEQHQL+WG RY EEE+  LR EV  VS +V  ET+QLRDRE +IR+IRDEQRQ DRIKIQTLLALSQPITPDITV+FQ L P
Sbjct:    1 MECYQEAMRAIERERINVLNKIDLVQPSFEEQHQLEWGRRYQEEELLALRLEVGEVSREVEAETKQLRDREEIIRAIRDEQRQ-DRIKIQTLLALSQPITPDITVVFQALAP 111
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BLAST of mRNA_H-paniculata_contig5521.13001.1 vs. uniprot
Match: A0A6H5K070_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K070_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 3.840e-21
Identity = 120/368 (32.61%), Postives = 144/368 (39.13%), Query Frame = 1 
Query:  160 LDWGHRYLEEEVCLLRDEVASVSADVRQETEQLRDREIVIRSIRDEQRQQDRIKIQTLLALSQPITPDITVIFQTLGPLA---PSAPPTPALAPTH----PQNKRGRLRPHVSPRRRHPSKTPPNRGQ--GQEEFPPPREGVXXXXXXXXXXXXXXXDVAISLSSTGRGFTAAAR--KYGFRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERSEAHERANSSSGVDRDAVSNRLQYTQDYHQHLLMRLELTQRHLVELDHLGRDYHETLRQDRQEREIQVQMQKDNAAAVVQGFGHR 1230
            L WG RY EEE+  LR EV  VS +V  E +QLRDRE +IR+IRDEQRQ DRIKIQTLLALSQPITPDITV+FQ L P A   P  PP+    P      PQN R  +  + SP RR  +      G+  G+ E  P R                         + GRG   A     YG                                                                                                      R         S G  +   +NRL  T+ Y QHL  RLEL +RHL EL+ L   YHETL +D+QEREI  ++Q+DNAA VV+    R
Sbjct:   13 LQWGRRYQEEELLALRLEVGEVSGEVEAEIKQLRDREEIIRAIRDEQRQ-DRIKIQTLLALSQPITPDITVVFQALAPDACPPPLPPPSRGARPLDRSYVPQNNRRAVASN-SPSRRSVAAAAATAGRNAGRGEQRPRRRRYLNDGIGSDGCSGGEQINMEGERNAGRGEEEATGGVSYGL------------------------------------------------------------------YPGRRWTSERVGGNGGHADRRRGGREGGVPGSRRRRRPRSGDGGGSLGTRKSREANRL-CTRGYQQHLERRLELNERHLRELERLEGSYHETLTRDKQEREIHARVQRDNAARVVEALERR 311
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BLAST of mRNA_H-paniculata_contig5521.13001.1 vs. uniprot
Match: A0A835ZIT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIT2_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.070e-5
Identity = 35/94 (37.23%), Postives = 55/94 (58.51%), Query Frame = 1 
Query:  109 FLAKIDLVKPSFEEQHQLDWGHRYLEEEVCLLRDEVASVSADVRQETEQLRDREIVIRSIRDEQRQQDRIKIQTLLALSQPITPDITVIFQTLG 390
            F  +I++V+PS EE+H+++W    LE E+ +   E AS+ A        +  R   I  +  EQR+ DR ++Q LLAL QP++ D+TV+F   G
Sbjct:   46 FRKQIEMVQPSQEERHRIEWQLEALERELAVASGEAASLRASTGTAGAAIAARAAAIAELLAEQRE-DRTRVQRLLALCQPVSHDVTVLFDHFG 138
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BLAST of mRNA_H-paniculata_contig5521.13001.1 vs. uniprot
Match: A0A8C5UDX7_9PASS (Coiled-coil domain containing 77 n=1 Tax=Malurus cyaneus samueli TaxID=2593467 RepID=A0A8C5UDX7_9PASS)

HSP 1 Score: 52.8 bits (125), Expect = 6.630e-5
Identity = 25/75 (33.33%), Postives = 47/75 (62.67%), Query Frame = 1 
Query:   34 STSATRATMEHYRKAMRDIEKERANFLAKIDLVKPSFEEQHQLDWGHRYLEEEVCLLRDEVASVSADVRQETEQL 258
            S + ++  +EHYRK + D ++E    + K++  K ++++QHQL W  R+LEEE+  L+  ++ +   + QE EQ+
Sbjct:   32 SLNPSQELLEHYRKKIADFDEEHDELIKKLEKYKQTYDDQHQLQWEVRHLEEEIAELQKALSDMQVYLFQEREQV 106
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BLAST of mRNA_H-paniculata_contig5521.13001.1 vs. uniprot
Match: A0A7K6GSR4_9PASS (CCD77 protein (Fragment) n=3 Tax=Malurus TaxID=55806 RepID=A0A7K6GSR4_9PASS)

HSP 1 Score: 55.8 bits (133), Expect = 8.280e-5
Identity = 37/109 (33.94%), Postives = 63/109 (57.80%), Query Frame = 1 
Query:   34 STSATRATMEHYRKAMRDIEKERANFLAKIDLVKPSFEEQHQLDWGHRYLEEEVCLLRDEVASVSADVRQETEQL------RDREIVIRSIRDEQRQQDRIKIQTLLAL 342
            S + ++  +EHYRK + D ++E    + K++  K ++++QHQL W  R+LEEE+  L+  ++ +   + QE EQ+       DR + IR +      +DR +IQ LLAL
Sbjct:   36 SLNPSQELLEHYRKKIADFDEEHEELIKKLEKYKQTYDDQHQLQWEVRHLEEEIAELQKALSDMQVYLFQEREQVLRLYSENDR-LKIREL------EDRKRIQQLLAL 137
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5521.13001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LLH3_ECTSI9.320e-3773.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K070_9PHAE3.840e-2132.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZIT2_9STRA1.070e-537.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8C5UDX7_9PASS6.630e-533.33Coiled-coil domain containing 77 n=1 Tax=Malurus c... [more]
A0A7K6GSR4_9PASS8.280e-533.94CCD77 protein (Fragment) n=3 Tax=Malurus TaxID=558... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5521contigH-paniculata_contig5521:3173..13517 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-00_004610.1
Exons5
Model size1235
Cds size1233
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5521.13001.1prot_H-paniculata_contig5521.13001.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5521 3173..13517 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930578.0076165-CDS-H-paniculata_contig5521:3172..33371622930578.0076165-CDS-H-paniculata_contig5521:3172..3337Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5521 3173..3337 +
1691481356.3426447-CDS-H-paniculata_contig5521:3172..33371691481356.3426447-CDS-H-paniculata_contig5521:3172..3337Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5521 3173..3337 +
1622930578.0488107-CDS-H-paniculata_contig5521:9411..95521622930578.0488107-CDS-H-paniculata_contig5521:9411..9552Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5521 9412..9552 +
1691481356.3524213-CDS-H-paniculata_contig5521:9411..95521691481356.3524213-CDS-H-paniculata_contig5521:9411..9552Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5521 9412..9552 +
1622930578.0678043-CDS-H-paniculata_contig5521:11410..120151622930578.0678043-CDS-H-paniculata_contig5521:11410..12015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5521 11411..12015 +
1691481356.3609958-CDS-H-paniculata_contig5521:11410..120151691481356.3609958-CDS-H-paniculata_contig5521:11410..12015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5521 11411..12015 +
1622930578.0865474-CDS-H-paniculata_contig5521:12459..126431622930578.0865474-CDS-H-paniculata_contig5521:12459..12643Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5521 12460..12643 +
1691481356.3699923-CDS-H-paniculata_contig5521:12459..126431691481356.3699923-CDS-H-paniculata_contig5521:12459..12643Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5521 12460..12643 +
1622930578.1102235-CDS-H-paniculata_contig5521:13379..135171622930578.1102235-CDS-H-paniculata_contig5521:13379..13517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5521 13380..13517 +
1691481356.38237-CDS-H-paniculata_contig5521:13379..135171691481356.38237-CDS-H-paniculata_contig5521:13379..13517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5521 13380..13517 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5521.13001.1

>prot_H-paniculata_contig5521.13001.1 ID=prot_H-paniculata_contig5521.13001.1|Name=mRNA_H-paniculata_contig5521.13001.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=411bp
RRSCFCCGCRNSTSATRATMEHYRKAMRDIEKERANFLAKIDLVKPSFEE
QHQLDWGHRYLEEEVCLLRDEVASVSADVRQETEQLRDREIVIRSIRDEQ
RQQDRIKIQTLLALSQPITPDITVIFQTLGPLAPSAPPTPALAPTHPQNK
RGRLRPHVSPRRRHPSKTPPNRGQGQEEFPPPREGVGVGIDGDDDSDGSG
GDVAISLSSTGRGFTAAARKYGFRQTASAREDGFRQDVCWDDDNSDGSDG
HGDSDNDDAGQRGGGPAGTGSRRASGGARRCRHSSEGGERGGREGTTGAG
AGYSSNGGGRSAGRSGGGGGRGVERSEAHERANSSSGVDRDAVSNRLQYT
QDYHQHLLMRLELTQRHLVELDHLGRDYHETLRQDRQEREIQVQMQKDNA
AAVVQGFGHR*
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mRNA from alignment at H-paniculata_contig5521:3173..13517+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5521.13001.1 ID=mRNA_H-paniculata_contig5521.13001.1|Name=mRNA_H-paniculata_contig5521.13001.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10345bp|location=Sequence derived from alignment at H-paniculata_contig5521:3173..13517+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGGCGTAGCTGCTTTTGTTGTGGGTGTCGAAACTCGACTTCGGCAACCAG
AGCCACCATGGAGCACTATCGCAAGGCAATGAGAGATATTGAGAAGGAAA
GGGCCAACTTTCTCGCCAAAATTGACCTCGTTAAGCCATCCTTCGAAGAG
CAGCACCAGCTAGATGTAAGTGCAACAAACATCGGTGTCAAGCAATTCAA
ATCCTTCACCTTACACCCTAGAAAATCAGCGAGAGTAGCTACGATAGACC
AATATGCAGCGGCAGCTCGTCTGTGTTCCGTATGGTGACCTTGACTGCAC
ACATCACATAACACCAGCATATATGATCATTGTATACACACCCTTCGTCA
CCTCTCACGATCTCTTCAAATTTCAAACTGCAGCAGCATCCGTCTTTGTA
GAGCATGTTCTTCGCGCAGGACTGACTAACTGTACTGTAATCCATGATGC
CTGTCAGTGCGAAGGGCAAAGTGGAAGGAGCCAATGATTACCTCTCTACT
GTATTGATTATGTGCCGCGCTGTCGTGCTGTCGCTCGTCGAATCTATGTA
AATTGGTCCAGTCATGTGTTTCTTTTTCCATCAGTTGAGCCTTTGTGACC
GTTATATATTATTTTTCGTCTCTTATTTATTGTAAAGGCCAAGGCAGATC
CAGTGATCATGAAACTTGAACAAACGTTCGTCGACATGAGTGCAAGTGGA
AGAGTGAAATGTACAGTATGGAGGGCTGTGTATTGGCCTTGTACAACCAT
ACAAATACCTCGGTCGGTCGGCGAAGCCGATATATGGATACATGAGCAAT
ACATCGGCGTCAGCCGCAAGCGAAGCGAGCCGGCCGCGTGAAGCGCTAGG
GGAGCGGCTGGCCGCGCCCCCTCCTGGCTGCTAAGGAGGCCTCGCCGGAG
GCGGGAAAATTACGGGTGTTGGCTTCATCTTTCTGCAAATCAAGGATCTC
AAATACCTCCTGGAGGCAATCTGAACTCGAACTGATAGAATAATTCACAG
CTTGGACGAAGGTCCTTCATCGACAGATGAAGGATATCGCGGGTTTTGGA
ACTATACAAGCACGAGGATATCTGGTGCCTTCCGAAATCCACAAATCGAT
AGCATGGATATCCTGCATACCTTCGAGGAATGTTCGACTTTTGAGTACTA
GCGCACCTACACAGATATTTCTACTTTTGAGCATGAAGGGATGACGGTTC
CGTTGCGTGTTAATTACTTGAAATTAAACCTTCGTCCAAGCTGTGGAATA
ATTGTCGAGAAAAACGAGAACTTCCAACCACGAATATATTAAAAGACAAA
ACACAGAGTGAGTTTGCGATACGTTCATGGCGCTACTTAGAGCAGAGAGT
GCAAGCACTAGGTTATCGGCGTGTTAAGAGGTGAGGGGGAACTCATGCGT
GTGGTACGCTGCTTTGCGATGTGTACTGTTCCACGTCGTTCATGTCGTCC
TGTGAGCTGTTGAATCATAACTGTATCATGTACACATTCAGTGGATCATG
ACCATGCTATTACGGAAATATATCGATATGTCGGGAAAGGTCCGGTCGAT
GTGTATCTATCGGTACCGATATACACCCCTAACAGTATGCGAAGTGCGCA
GATGCAGATAGAGCGGCAAGAGATTTATAGTAGAGACAATATACAACACG
AAGAGAAAGCATCCAAAGAAACAAATGTTGGTAAATAGTTAAACAGCTCG
TATATACATGAATCCAAACGAAAAACAGGCTAAAAGGAAGCAGGTTTGGT
CCTGCACAAGGGCTGGACCGTGAAAAGTCAAAACACTCCAGCGGGAGAGC
GAAGATAATACTGGCAATTCTGATTCATCAGACGTTAACTGGACGGCGTT
AATGTTTTTTTTCTTCATAGCCCCCCGTCTCGCCGAACGAAACTCAATTA
ACAGGCTCTGCATTCCAATATATCTCATCATCATCACGTACATACACTTA
AGACTTAGCCCTCACTTCAAAACTCAGCGATGCCCGTGGTGTGGACAACC
ACACGCGCGCGCACGCATACAGAGCAAAATGAAAGATGGGGACTAGAGCA
TCGAGGGGTGGTGACGGTAAAGCGCCAAAAAAGGTGCTGATTGTCAAAAA
TCAAAAGCGGCAAAGACGATCACCGTTGCATCGCGCAAAGCTTGGAAACA
AAACAAGAGCATACAGCCAGCACCGGCGCAGAAGCAAATACAGCGAATAA
AAGGCGTTGCGCACCAAGCACATAACACGAGTGTCGATGGTCCGAACAAA
TACATACACACACACACACACAGCAGAAAAAAATCCAGGAGTGATGAAGC
GCACTGGTGTAGTACGTATAGGGCGTGGAGGGGCTCCGACTGTTGATATA
AGCGAACAAACGCGCTGCCCGCAAAAAACGAGAAATTGGTATTATACTAT
CACCGCTCTACATCGTAAAATTCTGCATAATAAGTACGAAGAGCTCATAA
CACTCCCACCAAAGTCAACCCTTACACGCACGAGTTCGCACCCCTCCCCC
CCAAAGATAAGACCGAACACACGAGAGCTGCGAAAAAGCGAACGGACGAA
CGCACGCACGCCAACGAAGATCAAAATAAAACGTAAACATGATCACCTCA
AAAGAAAGAGGCGAACCCAAATTTTCCTGCTCCACAATCAATCGCAAGAG
CCGTACCCCGAAGCGCTCACAGATGCTAACACGGCTAAGCTAGGCGTTTG
TTCGGCAAGAAGTAATATAGCTTGGGTCCATACTTCGAAGTAGACGGTTT
CAGCAGAGAGTGTTGTTTCGAGTTCAGGGTCAAAGCCAGGAAAAATACTC
AGGCCAAAATTCTGAAAAGCCTAGGGTAAAAATTGACAATGTCAGTAGTA
TCGCATGTAGAGCAGGTGCACGGCACAGATGATAGAGAGTAGTACAGTAC
TATATATTTGTAGCAGATGTACGGCACACAAGTAACCCGCAGAAGTACTG
TGGCACAGCACGTGTACGGCACGAATAACAGAGACCGACAGTATATTTTC
AACCCGCCGCGTAGCCGATCAAGTGCTTTCGACGAACCACCCCTGGCTTC
TGCGCTTTGCGTCCCGTCAATTCGACGTTGCAGCTGTACAGACACGGCTG
CCAATAACAGGATGGAGCACAGCTTTGTCTTTCTTCGGGATGGGTGTGTC
CCGATCGAGGAGACCGCACGACAAAACATGGAGTCTTTGTTAGATGCGGT
TATATTGTAGGTCAGAGCTCCTTGAATAGGTCTCTCTAAATATGGTCTAC
TGACTATACTTGTAAAATTGGACGTTTTTTTTTCTTCTTTTTTTTGCCCA
ACACTACAAAAAAAAAACGATTTTTCTCCAGGAAACGTTTGAGGAGAAAA
ATGATAAGAACAGAGAAATTGAACCTACCCACAACACACCCATCGAATGG
GTTTTGCTAACCATCCTTTTGGCCACGCATCGCACGGTCTGGGATTTGAT
TCAGGGCCACGACTTCGTTGTGGGGCATGGCATATCCCCGTATTTTCGCC
TTAATTAGGATCCTAGCTCCCAGCTCCCAGCTCCTATTATTAGTTCGAAA
CGTTCAGGATTTTGGCCACCCAACACGAGCTCTCAAAACGAGCTCAAAGT
TGAGTTGGTGCGAATCATACCATTGACGGTTTGGCGCTCAAGGGAGTCGC
AATGACCCCCCAAGAAGACACGCGATAGCTCACTGGTCAAGGTCTCGATT
TCCCTTATACGAAGTTGCTTGCGAATGGTGCAATGCTTGCAGTATGGAGG
ACAAATTGTTCGAGTCATTAAGTATGGGGTGCCACGGGCAACCGACTGGG
AGCAATGTTTGCCAATATTTTTGCCTCGGTCCAAGCAACCTGCCAGATCC
GCATTTTTTATCGGGACGATTCAGAGCGTACGACCTATGCTTTCTCGTGC
GATCAAGAGGCTCTATAATTCTGCGCAGATACTGAGCGCGATAGCCTGTT
GCTAAGCTGTTGATCGGCTATTGCTGCATGTATGTGGCTACCTTGGATGT
GGCTGAAAGCGAAGCCAAAAGTTGAAGATCAAACATGTTTCGTGGACTGG
CAAGAGCACCACGAGAGGCAGACGTAGATGCTGTGTGAAATAGCATTAGA
CAGCAGAAACCAGCAGGCGAGAACCACTATGGTTAGGTTACGGTATTGCG
CACAACAACAGGCAGCCTCGCCGCGCGAGCAACGTCGTTTACATTATCAA
CTGTGAACCGGATCTCTTCGAGTAAAAAACACTTGTCGTGCATGGATACA
TGTTCGATGGCAAGCCAGGTGCATCTAAGTTTAGGTAACACTCTGTTATA
CATATATATATATATATTAATCTCGCAACTGGTGTCGTACTCGCTGAACC
ACCGAACACCCGAGTGTTTTGTCCTAAAAAAATCTGTCGATAACGATGAT
GCCATGCAGTTTTCACCTCGAAATTTGTCGGAATTTTTGGGTCAGTATTT
TTCTTGACGCTGACCGTGACCCGAGGCTGAAAGGTCTACGGCTGTGTCTG
CAGGCTAAGTCGATGAATATACCGACACATTGCCAATACGTTGATGAAGT
TGCTAAATCACTACATGCATTGGTGCGACCGAAGCGAGCCAATCCCCCCT
TGCCTCCTCCTCTTCCCCCCTGGCTGGTGAGGGGGCCTCGCCGGAAGCAC
TGCCGGAGTCAGGAAAATGATGCATTTTGGGTTCATCCATCTAGTGGATA
ATTACTATAACATATGGAATTTTAACTCTAGATATATGATTGCTAAATCA
TACGAGGCAAAACATTGATGTATTAGATGGCCGCCAATCGATATACCAGG
TACATGTATCGTGAAGGTATAGGCGCCTTTACACATTCGAAGCTGTCTCA
AAATAATCACGAGCGTTTCATGTGTGTGCCTTTCAGCGTTGATTTGCTAC
CAAACTCAAGAGAAAGGCTGCTGATCATTTTCGTGCGACTTCAGGGCACT
ACAACTTGAATCGTCGTTGGTTGTGCGCTTGAAGGCTGCAAATCTTCCTG
TCTTGCGGTTTCGTCACAGACTGGAGAGGATGTAGGGTGGCGTTGGCAAA
ACGAGTGGAACAATGCCAACACCCATCTCGCGCTATTGGAAATGACAAAA
ATACAGCACACACGTGTAGGGATCTACCAAATGGTGAACAGAGATCGTTC
CCCCCCTTGAGAACAAGGCTCTGTCCTCCCGAGGACGCATAGTCAATGGT
CGAACAGCTTTGACATGCAATACATGAGTATCCCTCCCCCCTCCCCCCGT
CTTCTGCTCTTGCATAACTTTGCTGATAGAGGACAAGTAGAGCTGGGAGT
GAAGGCTGCATAGCATAACCTCAGCGTGATTTTTTTTAGTAGCTAGTGAT
GATGTCTTCGGTGGATGGGTGCTAGTGACCACGTATTTTTCAGAGTTCTG
CACCTCTTCGGTGGCTCGCTGATGTGGCCGGCCTTATCGGGGGCGAAAAT
CCACTAGGCTGATCAACTACCATACTGGCTGCTGAGACTCTCATGAGGCC
AACCAGCCACCTATCCATGGCCAACTGGCGTCGGTTGGGTGTGGACAGGA
ATGATGGACAGGTAGTCTTCAGCGCAATAGGTGACGCTTCCGGGTAATAT
GTTCCGTGTCGTGAAAATAAACTTCCGCTCCACCCATTTTTTTTTTATTG
GGCTATATTTCTTCCATGGTTGGGAACATTATTGTTTTTGTTTGGGATGT
TGTTGTTGCCGTTCGGGACATTAAATTGCCATGAAGTAGTGAAGCCAGTG
CCAGCCACCGGATGCCACCCGGCCTGGCCAACCAGCTACCCCACAGACAA
GTGTAGAACCCAGGTATTTTCAGTTCAGTTTGTCCTTTCTTTTCAAAAGG
GACATCGTGCTGGCGTAGTCCCCCCCCCCCTCCCCCCCCCCCACCCCCCC
ATCAGATACTAGTGGCAACCCTCTATCCTTTGAACAGATGAGTACGCATG
ACCTCAGTGATACTCTGACTGTTTTTATCTCGTTGAAAATCAGAGCTGTT
CCTTTAAGCTATATCCCCCCTGGGCAATTAAACACTTTTTGACCCACATT
TTGTCAAACGTGTAAAAAAGCGATGAGCTTCATCATAAATCGCTCTGATA
GGAACAAACCCCCATCCTCTCGAGGACCCGTGGTCAGTGGCTTGACAAAT
ACGCCATGCAAAATGCGGAACACAAGCACGCCCGCCCCCCGCGCCCTGCT
CTCCCCCCCCAAAAAAACTCTGTTTTCCGCGCACTCAAGTGGGGACACCG
TTACCTGGAGGAAGAGGTGTGCCTGCTGAGGGACGAGGTTGCGTCTGTTT
CGGCGGACGTTCGACAAGAGACAGAGCAACTGCGGGACAGGGAGATAGTC
ATCCGAAGCATCCGCGACGAGCAACGGCAGGTGACAACACAATCCTCTCC
ACCCCTCGTCCCGTTTTTTCCCGGCGATTGGCGGTTGATGCTTGGCGGTA
TGCCTTCTACTCGTGTGGGTATATCTAGTTTGATGTGTGCTGCTGTGCTG
CTGCTAATAGAATTGTGTACCTACGTTTGTTTAGCTGTCCCCTGCAAACG
AGTTTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGCCCTAATAGCAA
TACGGACGGGTAAAAGTACAGTTAAACAACCACAGCGCAACAGTACCCTC
GCCATGTGTTGTTTTATCCCAAACATCGTCTCGATTATTGAAATAATATT
GCGATTGGTGTTGTTAGTAGGTCGAGGAGAAAACCAACAGCTTGGTTTTT
GGGCGATTTATCAAAGCAAATATCTAAGTTCAACGAAATCTCTCGCTATA
CCTTTTGCTTGATGAAAGGGGCACTCACCCCCCCCCCCCCTATTGGTCAT
GATATTAATTGCTGATAAGTCTATACAAGTGCAGATTCAAGTCAGCTGCG
TAACCTCACCCTGGGTACAATGGAGTTATGATATGAGGTTCAGAGTTATA
GTTGACCTGACTGTGGAAGGGGCAATTTTAGTACGAGAAAGAGAATTTCA
GATAGCAAAAATGGAAGGTTGTTTCTAAATTTTCATGCTTGTGAAATCGT
TCATATGAAGACTGTTGCATATTTTAGCTACGGTATACTACACATGCGGG
TGATACATTGATACTCCCCCCTTGTGAAGTTTGCTGTAGTACATGTCATG
CGTGGTCGAAGATGCGCGAAAAGTTCCGATATTTGGCCATGGTTGATGGG
GTCTGAATTTGGGTCATATGAACAGGATCGTGGCGATTTATCAAGCTTTA
ATATCCACATATTATTCAAGTCCATTCAGAAGTTCGTTTCACCTGATGAG
CATGCGTGGGTGGTATTGGATGAGTTGGAGGCGTGATGATAGAGGAGTAA
GCACGTCTTCATGCACAACTTGTTCAGTGTCACGTACTCCAACAAGCTCT
CACTATGGGGGTAGCTAGTCCCCAGGCTATAGCTAGCACTCCGAAGTCTG
AGTATAACTTGCTTGTGATGAAATGTGCTTTGACCTCATGTTTTTACTCT
CTATTTCGTATCCAACACACATGTTCCTCTGCTGCAGAAGATGGTCTATA
AAGACATCTTTTCAGGTTTACCTGTTATTGACAAAGACTCATTAACGATA
TAATGAGTAGTTTTCGACATGTAAGGTTGACTTCGGGTATATGGCATGCT
AACAGGTCGATCGAGATAGTATCTTATCAGGTATTCACTTGTTGGAGGTC
ATATCATGCCTAGTCCCCCCCCCCTTCGCCGCCCCCGAGTTTGCGCAGGC
CTGGGCATGTCATCGTGAGAAGTAAAGAGCAGAAGATGACGGCCGCAGTT
ACGAAGCACCGCACAACTCCCTGGAGTACCTGTTGCATGTGCTTTGTACT
GCCATCCTCGTCGCTCCTTTGTCACTTTAGCTTTAAAGCTCTCTGAAACC
CTACTCCACTCTAATATGGCGACGGTTGAACACAGAAAACTGTGAGACAG
GTCTGTTAGCTGTAATGAGTGTGCTCATGAACATAATATGTAGCATACAT
CAAGCTTAGTAGCCCTGACTGCCGACTCCATAATCTCAGCACATTGTATC
ACATGGCAATGAAAACTACTTGAGGTTGTGACATTGTCACCACACAGGGT
AAGCACCCCCTACGTTTGTTCATTTCGTGGGAAAGTAATCCAGAAGCTTC
TTGAAGATGCTGAACATTCGTGCCTCCTTTTGTTTCGCGTGTAGGGTAAG
CACTCCCCCCCGCCCCGCCTACCCCCCAACTACTCGAGCAGGACCGGATA
AAGATCCAGACCCTACTCGCGTTATCGCAGCCGATTACCCCGGACATAAC
GGTCATTTTTCAGACTCTGGGCCCCCTCGCACCGTCAGCCCCGCCGACGC
CAGCGCTGGCGCCTACACATCCTCAAAATAAAAGAGGAAGACTACGGCCG
CACGTTTCGCCGCGTCGTCGTCACCCCTCGAAAACGCCTCCGAACAGAGG
ACAGGGGCAGGAGGAGTTTCCACCGCCCCGAGAAGGCGTTGGTGTTGGTA
TCGATGGTGACGATGATAGCGATGGTAGTGGTGGTGATGTTGCAATTAGT
CTCAGTAGTACTGGTCGTGGCTTCACCGCTGCTGCGCGAAAATACGGATT
CCGACAGACTGCTTCTGCTCGAGAAGACGGGTTCCGGCAGGACGTGTGTT
GGGACGATGATAATAGCGATGGTAGTGATGGTCATGGTGATAGTGATAAT
GATGATGCGGGTCAAAGAGGAGGGGGCCCTGCTGGGACGGGCAGCCGGAG
AGCTAGTGGGGGTGCGCGTCGTTGTCGGCACAGCAGCGAAGGAGGGGAAA
GAGGAGGACGTGAAGGAACCACGGGTGCGGGTGCCGGATACAGGTCGTAC
CACTGCTACGCGGGCGAAAATGGCGACGATTTATGTAGTAAAACTAGGAC
GGGAGAGTATGGCGGCGGTGGCGGCGGAGGCAAGGCCCGTTGGCGGGAGC
AGGAAGAAGAGGAGGAGGAGCAGGGCAACCCAACCACATCACCACCAACA
AGGCGCGTGATTGTTCCTTCAGGAATAAGAAGGAAATTTGACGACGACGA
CGATGACGACGACGACGACGATGACGACGACGACGACGACGACGATGATG
ACAATCGCAAAAACGATAACGATGGCATCCACGGTGGGCAAAGACTGCAC
GAGACATCAGCACCAACATCACCGTTATTGTCGTTATTGTCGAGAGAAAA
AGAAATGGACGTGCGGTTGTCCGCTGCACATAGTCCCGAGCCCGAGTCTA
GAGGCGGCGGAGGCGGCGGCGGCGGGTGCCAACGCAGTAGCAACGGTGGT
GGGAGGAGTGCGGGTAGGAGCGGTGGGGGCGGCGGCCGGGGGGTGGAGAG
GAGCGAGGCACATGAGCGAGCCAATAGTAGCAGCGGTGTCGACCGTGACG
CTGTCAGCAATAGGTTGCAATATACGCAGGACTACCACCAGCACTTGTTA
ATGCGGTTGGAGTTGACCCAGGTATAAACAGTGTGTGTGTGTGTGTGTGT
ATGTTTTTAACTCCCCTCTCATTGTTTTGTCTTGTATATCTGTTCATTCT
TTTATTTGTGCAAGAGATATGTTACGGTGAATGCGTTGGGGGGTGGGTAA
GTACCAGGGCTTCACGCACCTCTTGAACCATGCACAACATGAGCTACGGC
AACCTTCACAAGAGAGTATCACTGTAGTACTCGCATGTGTAGTATACGTA
AAACATCAAACGTTTTTCCAAAAAGAAAGGTTCGTAAGTCAACCGTGCGA
TAGTCAGTTAAACTGTAGCTCTGAAGCTCACACACAATAACTCTACCGTA
CCCATGTTGAGGATTTGCGACTGTGTTCAAATTTGACTTGGTTACACTTA
TGATTAACAAAATTAGATCATGTACCAGTAAGGGATACATTTTTTACGGG
GTATACACACACGATGTGTTATGTCACACTCCAGTTGGTGTATATTGGGC
GATTGCTTTTTGTGTTGCCTTTTCTGCTCTCTCATTTTTGGTGGTTTTAC
TATCCATTGTTCCTATTGTCGTAGCTTGTTGTTTTATTAAATATCGAGAT
CTCTATTGTACGATATGTTCGTGAGGTCTTTGCCTCTGTCTCTTCGTCTC
TCTGTCTCTGTCTCTCTGGTGCTTTCTGCTCGTGTTGTACGGGTCACACG
TTCTTCCCTTGCCACGGCGTTCGCGGGTGTGCTCCATGTTGTCGTTGTTC
ATCGCAGAGGCACCTGGTGGAGCTTGACCATCTCGGCAGGGACTACCACG
AAACGCTCCGACAAGATCGCCAGGAGCGAGAAATACAGGTTCAGATGCAA
AAAGATAACGCGGCTGCGGTGGTGCAAGGCTTTGGACACCGGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig5521:3173..13517+

>mRNA_H-paniculata_contig5521.13001.1 ID=mRNA_H-paniculata_contig5521.13001.1|Name=mRNA_H-paniculata_contig5521.13001.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2466bp|location=Sequence derived from alignment at H-paniculata_contig5521:3173..13517+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGGCGTAGCTGCTTTTGTTGTGGGTGTCGAAACTCGACTTCGGCAACCAG
AGCCACCATGGAGCACTATCGCAAGGCAATGAGAGATATTGAGAAGGAAA
GGGCCAACTTTCTCGCCAAAATTGACCTCGTTAAGCCATCCTTCGAAGAG
CAGCACCAGCTAGATCGGCGTAGCTGCTTTTGTTGTGGGTGTCGAAACTC
GACTTCGGCAACCAGAGCCACCATGGAGCACTATCGCAAGGCAATGAGAG
ATATTGAGAAGGAAAGGGCCAACTTTCTCGCCAAAATTGACCTCGTTAAG
CCATCCTTCGAAGAGCAGCACCAGCTAGATTGGGGACACCGTTACCTGGA
GGAAGAGGTGTGCCTGCTGAGGGACGAGGTTGCGTCTGTTTCGGCGGACG
TTCGACAAGAGACAGAGCAACTGCGGGACAGGGAGATAGTCATCCGAAGC
ATCCGCGACGAGCAACGGCAGTGGGGACACCGTTACCTGGAGGAAGAGGT
GTGCCTGCTGAGGGACGAGGTTGCGTCTGTTTCGGCGGACGTTCGACAAG
AGACAGAGCAACTGCGGGACAGGGAGATAGTCATCCGAAGCATCCGCGAC
GAGCAACGGCAGCAGGACCGGATAAAGATCCAGACCCTACTCGCGTTATC
GCAGCCGATTACCCCGGACATAACGGTCATTTTTCAGACTCTGGGCCCCC
TCGCACCGTCAGCCCCGCCGACGCCAGCGCTGGCGCCTACACATCCTCAA
AATAAAAGAGGAAGACTACGGCCGCACGTTTCGCCGCGTCGTCGTCACCC
CTCGAAAACGCCTCCGAACAGAGGACAGGGGCAGGAGGAGTTTCCACCGC
CCCGAGAAGGCGTTGGTGTTGGTATCGATGGTGACGATGATAGCGATGGT
AGTGGTGGTGATGTTGCAATTAGTCTCAGTAGTACTGGTCGTGGCTTCAC
CGCTGCTGCGCGAAAATACGGATTCCGACAGACTGCTTCTGCTCGAGAAG
ACGGGTTCCGGCAGGACGTGTGTTGGGACGATGATAATAGCGATGGTAGT
GATGGTCATGGTGATAGTGATAATGATGATGCGGGTCAAAGAGGAGGGGG
CCCTGCTGGGACGGGCAGCCGGAGAGCTAGTGGGGGTGCGCGTCGTTGTC
GGCACAGCAGCGAAGGAGGGGAAAGAGGAGGACGTGAAGGAACCACGGGT
GCGGGTGCCGGATACAGCAGGACCGGATAAAGATCCAGACCCTACTCGCG
TTATCGCAGCCGATTACCCCGGACATAACGGTCATTTTTCAGACTCTGGG
CCCCCTCGCACCGTCAGCCCCGCCGACGCCAGCGCTGGCGCCTACACATC
CTCAAAATAAAAGAGGAAGACTACGGCCGCACGTTTCGCCGCGTCGTCGT
CACCCCTCGAAAACGCCTCCGAACAGAGGACAGGGGCAGGAGGAGTTTCC
ACCGCCCCGAGAAGGCGTTGGTGTTGGTATCGATGGTGACGATGATAGCG
ATGGTAGTGGTGGTGATGTTGCAATTAGTCTCAGTAGTACTGGTCGTGGC
TTCACCGCTGCTGCGCGAAAATACGGATTCCGACAGACTGCTTCTGCTCG
AGAAGACGGGTTCCGGCAGGACGTGTGTTGGGACGATGATAATAGCGATG
GTAGTGATGGTCATGGTGATAGTGATAATGATGATGCGGGTCAAAGAGGA
GGGGGCCCTGCTGGGACGGGCAGCCGGAGAGCTAGTGGGGGTGCGCGTCG
TTGTCGGCACAGCAGCGAAGGAGGGGAAAGAGGAGGACGTGAAGGAACCA
CGGGTGCGGGTGCCGGATACAGTAGCAACGGTGGTGGGAGGAGTGCGGGT
AGGAGCGGTGGGGGCGGCGGCCGGGGGGTGGAGAGGAGCGAGGCACATGA
GCGAGCCAATAGTAGCAGCGGTGTCGACCGTGACGCTGTCAGCAATAGGT
TGCAATATACGCAGGACTACCACCAGCACTTGTTAATGCGGTTGGAGTTG
ACCCAGTAGCAACGGTGGTGGGAGGAGTGCGGGTAGGAGCGGTGGGGGCG
GCGGCCGGGGGGTGGAGAGGAGCGAGGCACATGAGCGAGCCAATAGTAGC
AGCGGTGTCGACCGTGACGCTGTCAGCAATAGGTTGCAATATACGCAGGA
CTACCACCAGCACTTGTTAATGCGGTTGGAGTTGACCCAGAGGCACCTGG
TGGAGCTTGACCATCTCGGCAGGGACTACCACGAAACGCTCCGACAAGAT
CGCCAGGAGCGAGAAATACAGGTTCAGATGCAAAAAGATAACGCGGCTGC
GGTGGTGCAAGGCTTTGGACACCGGTAAAGGCACCTGGTGGAGCTTGACC
ATCTCGGCAGGGACTACCACGAAACGCTCCGACAAGATCGCCAGGAGCGA
GAAATACAGGTTCAGATGCAAAAAGATAACGCGGCTGCGGTGGTGCAAGG
CTTTGGACACCGGTAA
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