prot_H-paniculata_contig55197.12994.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig55197.12994.1
Unique Nameprot_H-paniculata_contig55197.12994.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length44
Homology
BLAST of mRNA_H-paniculata_contig55197.12994.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 4.650e-7
Identity = 21/32 (65.62%), Postives = 23/32 (71.88%), Query Frame = 0
Query:    6 GYIGDGQCNPENNIPGCAYDGGDCCLCTCVHH 37
            G IG+G C+  NN P CAYDGGDCC CTC  H
Sbjct:  240 GQIGNGYCDDSNNSPECAYDGGDCCECTCESH 271          
BLAST of mRNA_H-paniculata_contig55197.12994.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 2.230e-6
Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 0
Query:    8 IGDGQCNPENNIPGCAYDGGDCCLCTCVHHVN 39
            IGDG C+ + N P CAYDGGDCC CTC + V+
Sbjct:  357 IGDGYCSEDLNTPECAYDGGDCCACTCQNDVD 388          
BLAST of mRNA_H-paniculata_contig55197.12994.1 vs. uniprot
Match: D7FV90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV90_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 7.820e-6
Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = 0
Query:    8 IGDGQCNPENNIPGCAYDGGDCCLCTC 34
            +G+G C PENNIP C YDGGDCC C+C
Sbjct:  162 MGNGLCIPENNIPECEYDGGDCCECSC 188          
BLAST of mRNA_H-paniculata_contig55197.12994.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI)

HSP 1 Score: 49.7 bits (117), Expect = 1.070e-5
Identity = 19/27 (70.37%), Postives = 21/27 (77.78%), Query Frame = 0
Query:    8 IGDGQCNPENNIPGCAYDGGDCCLCTC 34
            +GDG CN +NN   CAYDGGDCC CTC
Sbjct:  295 VGDGYCNQQNNNELCAYDGGDCCSCTC 321          
BLAST of mRNA_H-paniculata_contig55197.12994.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 48.9 bits (115), Expect = 1.960e-5
Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = 0
Query:    6 GYIGDGQCNPENNIPGCAYDGGDCCLCTC 34
            G  G+G C+ +NNI  CAYDGGDCC CTC
Sbjct:  272 GSFGNGWCDEDNNIEECAYDGGDCCECTC 300          
BLAST of mRNA_H-paniculata_contig55197.12994.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 48.9 bits (115), Expect = 2.000e-5
Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 0
Query:    8 IGDGQCNPENNIPGCAYDGGDCCLCTCVHHVNC 40
            +GDG C+ +NN   CAYDGGDCC CTC  +  C
Sbjct:  183 MGDGYCDMDNNNAACAYDGGDCCECTCEPNNKC 215          
BLAST of mRNA_H-paniculata_contig55197.12994.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 48.5 bits (114), Expect = 2.740e-5
Identity = 19/27 (70.37%), Postives = 20/27 (74.07%), Query Frame = 0
Query:    8 IGDGQCNPENNIPGCAYDGGDCCLCTC 34
            IGDG C+   N P CAYDGGDCC CTC
Sbjct:  131 IGDGYCSENLNTPECAYDGGDCCSCTC 157          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig55197.12994.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LEP6_ECTSI4.650e-765.63Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5JM92_9PHAE2.230e-662.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV90_ECTSI7.820e-670.37Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FI87_ECTSI1.070e-570.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0S4_ECTSI1.960e-565.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4F9_ECTSI2.000e-557.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3F4_ECTSI2.740e-570.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainPFAMPF00066Notchcoord: 7..29
e-value: 1.9E-5
score: 25.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig55197contigH-paniculata_contig55197:567..698 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig55197.12994.1mRNA_H-paniculata_contig55197.12994.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig55197 567..698 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig55197.12994.1 ID=prot_H-paniculata_contig55197.12994.1|Name=mRNA_H-paniculata_contig55197.12994.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=44bp
TSALAGYIGDGQCNPENNIPGCAYDGGDCCLCTCVHHVNCAFAY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom