prot_H-paniculata_contig55063.12977.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig55063.12977.1
Unique Name	prot_H-paniculata_contig55063.12977.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	93

Homology

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BLAST of mRNA_H-paniculata_contig55063.12977.1 vs. uniprot
Match: D8LSW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW6_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 3.230e-45
Identity = 80/91 (87.91%), Postives = 87/91 (95.60%), Query Frame = 0

Query:    1 YNSVVRDCSLEKDLSLLPSGDMTGIGDRGVNLSGGQKARVGLARMAYARADVYVMDDPLSAVDPAVGRELFSKVVCGRLAGSTRLLVTHQV 91
            Y++V+RDC+LE+DLSLLPSGD TGIGDRGVNLSGGQKARVGLARMAYA AD Y+MDDPLSAVDPAVGRELFSKVVCGRL GSTR+LVTHQV
Sbjct:  680 YDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQV 770

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BLAST of mRNA_H-paniculata_contig55063.12977.1 vs. uniprot
Match: A0A6H5JDN6_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 3.230e-45
Identity = 80/91 (87.91%), Postives = 87/91 (95.60%), Query Frame = 0

Query:    1 YNSVVRDCSLEKDLSLLPSGDMTGIGDRGVNLSGGQKARVGLARMAYARADVYVMDDPLSAVDPAVGRELFSKVVCGRLAGSTRLLVTHQV 91
            Y++V+RDC+LE+DLSLLPSGD TGIGDRGVNLSGGQKARVGLARMAYA AD Y+MDDPLSAVDPAVGRELFSKVVCGRL GSTR+LVTHQV
Sbjct:  495 YDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQV 585

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BLAST of mRNA_H-paniculata_contig55063.12977.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 8.210e-45
Identity = 79/91 (86.81%), Postives = 87/91 (95.60%), Query Frame = 0

Query:    1 YNSVVRDCSLEKDLSLLPSGDMTGIGDRGVNLSGGQKARVGLARMAYARADVYVMDDPLSAVDPAVGRELFSKVVCGRLAGSTRLLVTHQV 91
            Y++V+RDC+LE+DLSLLPSGD TGIGD+GVNLSGGQKARVGLARMAYA AD Y+MDDPLSAVDPAVGRELFSKVVCGRL GSTR+LVTHQV
Sbjct:  543 YDAVIRDCALERDLSLLPSGDQTGIGDKGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQV 633

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BLAST of mRNA_H-paniculata_contig55063.12977.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 3.870e-44
Identity = 79/91 (86.81%), Postives = 86/91 (94.51%), Query Frame = 0

Query:    1 YNSVVRDCSLEKDLSLLPSGDMTGIGDRGVNLSGGQKARVGLARMAYARADVYVMDDPLSAVDPAVGRELFSKVVCGRLAGSTRLLVTHQV 91
            Y++V+RDC+LE+DLSLLPSGD TGIGDRGVNLSGGQKARVGLARMAYA AD Y+MDDPLSAVDPAVGRELFSKVVCGRL  STR+LVTHQV
Sbjct:  511 YDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKESTRVLVTHQV 601

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BLAST of mRNA_H-paniculata_contig55063.12977.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 7.580e-42
Identity = 75/91 (82.42%), Postives = 85/91 (93.41%), Query Frame = 0

Query:    1 YNSVVRDCSLEKDLSLLPSGDMTGIGDRGVNLSGGQKARVGLARMAYARADVYVMDDPLSAVDPAVGRELFSKVVCGRLAGSTRLLVTHQV 91
            Y++V+RDC+LE+DLS LPSGD TGIGD+GVNLSGGQKARVGLARMAYA AD Y+MDDPLSAVDPAVGR+LFS+VV GRL GSTR+LVTHQV
Sbjct:  464 YDAVIRDCALERDLSFLPSGDQTGIGDKGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRKLFSQVVSGRLKGSTRVLVTHQV 554

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BLAST of mRNA_H-paniculata_contig55063.12977.1 vs. uniprot
Match: A0A835YMC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC7_9STRA)

HSP 1 Score: 132 bits (331), Expect = 9.460e-34
Identity = 64/92 (69.57%), Postives = 76/92 (82.61%), Query Frame = 0

Query:    1 YNSVVRDCSLEKDLSLLPSGDMTGIGDRGVNLSGGQKARVGLARMAYARADVYVMDDPLSAVDPAVGRELFSKVVCGRLAGSTRLLVTHQVR 92
            Y +V+  C L +DLS+LP GDMT IGDRGVNLSGGQ+ARVGLAR+AYA   +Y++DDPLSAVDP VGR LF  VVCG LAG TR+LVTHQ++
Sbjct:  823 YEAVLDACELRRDLSMLPDGDMTLIGDRGVNLSGGQRARVGLARVAYADVPLYLLDDPLSAVDPKVGRHLFKHVVCGLLAGKTRVLVTHQLQ 914

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BLAST of mRNA_H-paniculata_contig55063.12977.1 vs. uniprot
Match: S4PPH3_9NEOP (Putative multidrug resistance-associated protein lethal(2)03659 (Fragment) n=9 Tax=Nymphalidae TaxID=33415 RepID=S4PPH3_9NEOP)

HSP 1 Score: 119 bits (298), Expect = 6.180e-33
Identity = 56/92 (60.87%), Postives = 73/92 (79.35%), Query Frame = 0

Query:    1 YNSVVRDCSLEKDLSLLPSGDMTGIGDRGVNLSGGQKARVGLARMAYARADVYVMDDPLSAVDPAVGRELFSKVVCGRLAGSTRLLVTHQVR 92
            YN+VVR C+L++D +LLP GD T +G+RGV+LSGGQ+AR+ LAR  Y RAD+Y++DDPLSAVD  VGR LF   V G L  +TR+LVTHQ++
Sbjct:    6 YNTVVRRCALDRDFTLLPHGDKTVVGERGVSLSGGQRARISLARAVYKRADIYLLDDPLSAVDAHVGRHLFESCVVGYLRNTTRVLVTHQLQ 97

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BLAST of mRNA_H-paniculata_contig55063.12977.1 vs. uniprot
Match: A0A699Z281_HAELA (ABC transporter domain-containing protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699Z281_HAELA)

HSP 1 Score: 118 bits (295), Expect = 2.440e-32
Identity = 58/92 (63.04%), Postives = 72/92 (78.26%), Query Frame = 0

Query:    1 YNSVVRDCSLEKDLSLLPSGDMTGIGDRGVNLSGGQKARVGLARMAYARADVYVMDDPLSAVDPAVGRELFSKVVCGRLAGSTRLLVTHQVR 92
            Y SV+  C+L  DL +L +GD T IG++GVNLSGGQK RV LAR AY+ AD+Y++DDPLSAVD  VGR LF   +CG LAGSTR+LVTHQ++
Sbjct:   29 YTSVLAACALGPDLEVLAAGDATEIGEKGVNLSGGQKHRVALARAAYSGADIYLLDDPLSAVDAHVGRHLFDMCLCGLLAGSTRILVTHQLQ 120

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BLAST of mRNA_H-paniculata_contig55063.12977.1 vs. uniprot
Match: A0A1X7SPK3_AMPQE (ABC transporter domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SPK3_AMPQE)

HSP 1 Score: 119 bits (299), Expect = 9.860e-32
Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 0

Query:    1 YNSVVRDCSLEKDLSLLPSGDMTGIGDRGVNLSGGQKARVGLARMAYARADVYVMDDPLSAVDPAVGRELFSKVVCGRLAGSTRLLVTHQVR 92
            Y SV+  C+LEKD+ LLP GD+T +G+RGV LSGGQKARV LAR  Y +ADVY++DDPLSAVD AV R LF + +CG L+    +LVTHQV+
Sbjct:   35 YESVIEACALEKDIELLPEGDLTLVGERGVTLSGGQKARVNLARAVYRQADVYLLDDPLSAVDAAVSRHLFERCICGILSDKIVILVTHQVQ 126

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BLAST of mRNA_H-paniculata_contig55063.12977.1 vs. uniprot
Match: M1KZL8_9CRUS (Putative multidrug resistance protein 4 (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=M1KZL8_9CRUS)

HSP 1 Score: 116 bits (290), Expect = 1.450e-31
Identity = 55/92 (59.78%), Postives = 69/92 (75.00%), Query Frame = 0

Query:    1 YNSVVRDCSLEKDLSLLPSGDMTGIGDRGVNLSGGQKARVGLARMAYARADVYVMDDPLSAVDPAVGRELFSKVVCGRLAGSTRLLVTHQVR 92
            Y  V++ C+L+KD SL P+GD T +G+RGV+LSGGQKARV LAR  Y  AD+Y+MDDPLSAVD  VGR LF K + G L    R+LVTHQ++
Sbjct:   38 YKKVIKACALDKDFSLFPNGDQTAVGERGVSLSGGQKARVNLARSLYVDADIYLMDDPLSAVDTHVGRHLFDKAINGYLRDKIRVLVTHQLQ 129

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig55063.12977.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig55063.12977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LSW6_ECTSI	3.230e-45	87.91	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JDN6_9PHAE	3.230e-45	87.91	ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D8LSW4_ECTSI	8.210e-45	86.81	Multidrug resistance-associated protein-like prote...	[more]
D8LSW3_ECTSI	3.870e-44	86.81	Multidrug resistance-associated protein-like prote...	[more]
A0A6H5JDL0_9PHAE	7.580e-42	82.42	ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
A0A835YMC7_9STRA	9.460e-34	69.57	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
S4PPH3_9NEOP	6.180e-33	60.87	Putative multidrug resistance-associated protein l...	[more]
A0A699Z281_HAELA	2.440e-32	63.04	ABC transporter domain-containing protein n=1 Tax=...	[more]
A0A1X7SPK3_AMPQE	9.860e-32	61.96	ABC transporter domain-containing protein n=1 Tax=...	[more]
M1KZL8_9CRUS	1.450e-31	59.78	Putative multidrug resistance protein 4 (Fragment)...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003439	ABC transporter-like	PFAM	PF00005	ABC_tran	coord: 23..59 e-value: 7.4E-6 score: 26.5
None	No IPR available	GENE3D	3.40.50.300		coord: 1..93 e-value: 4.2E-25 score: 90.4
None	No IPR available	PANTHER	PTHR24223:SF350	CANALICULAR MULTISPECIFIC ORGANIC ANION TRANSPORTER 2	coord: 1..92
None	No IPR available	PANTHER	PTHR24223	FAMILY NOT NAMED	coord: 1..92
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig55063	contig	H-paniculata_contig55063:606..884 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig55063.12977.1	mRNA_H-paniculata_contig55063.12977.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig55063 606..884 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig55063.12977.1 ID=prot_H-paniculata_contig55063.12977.1|Name=mRNA_H-paniculata_contig55063.12977.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=93bp
YNSVVRDCSLEKDLSLLPSGDMTGIGDRGVNLSGGQKARVGLARMAYARA
DVYVMDDPLSAVDPAVGRELFSKVVCGRLAGSTRLLVTHQVRV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003439	ABC_transporter-like
IPR027417	P-loop_NTPase