prot_H-paniculata_contig5504.12973.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5504.12973.1
Unique Nameprot_H-paniculata_contig5504.12973.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length808
Homology
BLAST of mRNA_H-paniculata_contig5504.12973.1 vs. uniprot
Match: D7FJX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX5_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 3.840e-41
Identity = 147/365 (40.27%), Postives = 209/365 (57.26%), Query Frame = 0
Query:  453 SQELSAELKESRAREASAKRNAEDRIWAESEKLQEALKVAEAAKNRAEDGLASAKDKKKRDLQQEVRRLNQRMMELQQGRREQAAQWETTVSELKSKL-----ALAQESEAK---LTEALEQVKVVNKGVQVEFGGGFHEQEALLLEKASAADVLREEVEGLKASLEESAVRKQEADATRETLTATLGRANSRIAELTSQASQLSKARSVMANQIRALEAQAYSASLSQASVSPRGEFIPAKSLAKGGTPAKGSSTGTPLREASPSPAVNNPPSGRGTTISVVQQRRRAIIDEND-DADVEEGTTWDGGAMRRGGRDGYQTDAKPGVNHVRALSFISYGASNPVWAALTEQAPGVAIWLNQQPPQ 808
            S+ELS+EL+ +R+REA+A R A + + AE E L+ A+  AEA + +AE+GLA  K+KKKRDLQ EVRRLN+RMMELQQ RRE+ +  E ++ EL++K      ALAQE + +                      G    E+E  L       + L+ EVEGLK+ LEE +  + +A   +    A LGRAN+RIAELTS+++QL++ARS M  QI ALE Q  SA+L QA+ +  G      +   G      +   TPLR+ S  P  + PP      +   Q+ R +    +  + D+E+G    GG       D ++  AKPG +HV++L  IS  AS+PV AA++E+ PG+  WL+QQPPQ
Sbjct:   67 SEELSSELEATRSREAAATRTAREGVGAELEGLRGAVGAAEAGREQAEEGLARLKEKKKRDLQ-EVRRLNERMMELQQARREEVSDLEGSLQELRAKTDELEHALAQEEQHQGXXXXXXXXXXXXXXXXXXXXXGPRREEREKELSLLRKLVEKLQREVEGLKSDLEEESTGRSQAQNAKNVSAAALGRANARIAELTSKSAQLTRARSAMVAQINALEEQLKSAALKQAAAATAGGAAETNTTDSGSV----ADFSTPLRDLSEVPPPSQPPMSADPPMRQRQRHRLSGAGPSSGNLDLEDG----GGYFDE---DEHKAQAKPG-DHVKSL-LISC-ASSPVGAAISERLPGLVTWLHQQPPQ 416          
BLAST of mRNA_H-paniculata_contig5504.12973.1 vs. uniprot
Match: A0A6H5L1J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1J2_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 6.580e-24
Identity = 139/430 (32.33%), Postives = 202/430 (46.98%), Query Frame = 0
Query:  453 SQELSAELKESRAREASAKRNAEDRIWAESEKLQEALKVAEAAKNRAEDGLASAKDKKKRDLQQEVRRLNQRMMELQQGRREQAAQWETTVSELKSKL-----ALA---------------------------------------------------------------QESEAKLTEALEQVKVVNKGVQVEFGGGFH-----EQEALLLEKASAADVLREEVEGLKASLEESAVRKQEADATRETLTATLGRANSRIAELTSQASQLSKARSVMANQIRALEAQAYSASLSQASVSPRGEFIPAKSLAKGGTPAKGSSTGTPLREASPSPAVNNPPSGRGTTISVVQQRRRAIID-ENDDADVEEGTTWDGGAMRRGGRDGYQTDAKPGVNHVRALSFISYGASNPVWAALTEQAPGVAIWLNQQPPQ 808
            S+ELS+EL+ +RAREA+A R A + + AE E L+ A+  AEA + +AE+GLA  KDKKKRDLQ EVRRLN+RMMELQQ RRE+ +  E ++ EL++K      ALA                                                               QE + +   A E++  V +G++ E  GG       E+E  LL K    + L+ EVEGLK+ LEE +  + +A+  ++  TA LGRAN+R                              SA+L QA+ +  G  +   +   G      +   TPLR+ S  P  + PP      +   Q+ R +     + + D+E+G    GG       D  +  AKPG +H+++L  IS  AS+PV AA++E+ PG+  WL+QQPPQ
Sbjct: 1358 SEELSSELEAARAREAAATRTAREGVGAEIEGLRRAVGTAEAGREQAEEGLARLKDKKKRDLQ-EVRRLNERMMELQQARREEVSDLEGSLQELRAKTGELGHALAKALSEKDHLQQAATAXXXXXXXXXXXXXXXXXXXXXXXXXPIPSEGTIPVPAGDPNPRPQEPRQEEQHQCGGAREEMVRVGEGLRSEERGGDQRRDEREKELSLLRKL--VEKLQREVEGLKSDLEEESTGRSQAEDAKDVSTAALGRANARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAALKQAAAATVGRAVETNTTDSGSV----AGFSTPLRDLSEGPPPSQPPMSADPPMRQRQRHRLSGAGLSSGNLDLEDG----GGYFDE---DENKAQAKPG-DHIKSL-LISC-ASSPVGAAISERLPGLVTWLHQQPPQ 1770          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5504.12973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJX5_ECTSI3.840e-4140.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1J2_9PHAE6.580e-2432.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 193..234
NoneNo IPR availableCOILSCoilCoilcoord: 25..73
NoneNo IPR availableCOILSCoilCoilcoord: 439..473
NoneNo IPR availableCOILSCoilCoilcoord: 304..338
NoneNo IPR availableCOILSCoilCoilcoord: 482..563
NoneNo IPR availableCOILSCoilCoilcoord: 596..616
NoneNo IPR availableCOILSCoilCoilcoord: 358..420
NoneNo IPR availableCOILSCoilCoilcoord: 624..651
NoneNo IPR availableCOILSCoilCoilcoord: 81..108
NoneNo IPR availableCOILSCoilCoilcoord: 116..136
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 2..326
NoneNo IPR availablePANTHERPTHR34491:SF9coord: 2..326
NoneNo IPR availableSUPERFAMILY90257Myosin rod fragmentscoord: 52..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5504contigH-paniculata_contig5504:1907..12946 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5504.12973.1mRNA_H-paniculata_contig5504.12973.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5504 1907..12946 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5504.12973.1 ID=prot_H-paniculata_contig5504.12973.1|Name=mRNA_H-paniculata_contig5504.12973.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=808bp
QQELDESRRVLEAVEAARDTSSHALAAARQEAVAAQTDFEETRNALLKSA
MELEESRQACAAAEEELEAAKAAGAGMVSEAEDSRKMIAEITSELEDLRR
TVAEITSEGDVLRKSVVEMTSDRDDLRDKLAETMSEGSDLRKLVAEMTSD
KDDMRKKLTELGGQMETEKARTKSALNETSELREALESTGRDAAAAANAL
ADADAARARVEQELDTLRTKLAEVTAALQEAREGAAADLESVRVELLTSA
REEANGEATAAAAAAAAASAAHQESLQKANAELAAVLTELAATREGSDAT
AIAVAEAAAGRARVEAEVETLRAELAAAREESAAAAAMAVTSAVSALEET
RADHARVQECLRQELAETEKAVVAAERESAVARKQLTGRESEIEELQRML
MQAQQEQSKAAREAADANQRAAAAISEVESAAQVAAWDAKSLREALQVAR
NGSQELSAELKESRAREASAKRNAEDRIWAESEKLQEALKVAEAAKNRAE
DGLASAKDKKKRDLQQEVRRLNQRMMELQQGRREQAAQWETTVSELKSKL
ALAQESEAKLTEALEQVKVVNKGVQVEFGGGFHEQEALLLEKASAADVLR
EEVEGLKASLEESAVRKQEADATRETLTATLGRANSRIAELTSQASQLSK
ARSVMANQIRALEAQAYSASLSQASVSPRGEFIPAKSLAKGGTPAKGSST
GTPLREASPSPAVNNPPSGRGTTISVVQQRRRAIIDENDDADVEEGTTWD
GGAMRRGGRDGYQTDAKPGVNHVRALSFISYGASNPVWAALTEQAPGVAI
WLNQQPPQ
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