mRNA_H-paniculata_contig550.12967.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig550.12967.1 vs. uniprot
Match: D7FM15_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM15_ECTSI) HSP 1 Score: 664 bits (1714), Expect = 9.420e-203 Identity = 377/611 (61.70%), Postives = 434/611 (71.03%), Query Frame = 1
Query: 1 PSSSLEELFLRWGLDASLRRYHCRNLGIEHLYPWQARCLAEPGVVEGSRDLLYFAPTSGGKTMVAELVLLLRVAGPLPLVRRSGHASGVGGSDDAW------DGMRSGVGEAQNSPAVRRAVVVLPFISMVTEKVRHLQQVVAPYNRGRPKPKRIKVKAMYGGKGGGGLRGTHIAVCTIEKANSLVNRMLAAGELHELSCLVLDELHMIGDGGRGQTLELLLTKARQTSVEPVLAPA-PMLETVPDLFPGTVSNLPPNKDDSVIGMSATLSNSDELAGWLGAALHVSDYRPIPLDERVLLGMHVYDRAGKVVRTFAERPNPETNPDHVVTLCRRDALAPQDQVIIFCSTKGFCHNCATIVAQNLKMPPSKSVEAKRSALMSQLAKEMSMGVDPILQEIIPHGVAFHHAGLADTERSAIENAFREGTLSVLAATSTLGAGVNLPAGRVILRNLNVSGGGLSATSYRQMAGRAGRKGAGRARGEAVVVATNKGQAGRASALMNAGLAAVKSALAPTSDGGAGMTRLVLEAVCGKLIQTEAEL--------DQYIACTLLWCQQPGDDARESLLDQAWAALHLLQKEDCIQVEPSPLQALHRTTATVT-ATASA 1785
P +SLE LF RWGLD +LR YH R+LGIEHLYPWQARCLA PGV EG +DLLYFAPTSGGKTMVAEL+LLLRV G LPL +G G + G +G+ + RRA++VLPF+SMVTEK +HLQ +VAPYNRGRPK KRI+V+A++G KGG L+ IAVCTIEKAN LVNRM AA ELHELSCLV+DELHMIGDGGRGQ LELLL K + + +APA P ET D+ G+ PP + ++GMSATLSN ELA WLGA LHVSD+RPIPLDERV+LGMHVYD+ G VVR FA +P+++PDHVVTLCR A DQVIIFCSTK FCHNCA L+E IPHGVAFHHAGLADTERSAIE AFR GTL VLAATSTLGAGVNLPAGRVILRN+N GGGLSATSYRQMAGRAGRKGAGRARGEA+++A NKGQA RA+ LMNAGLAAV+SAL PT+DGG G TR+ LEAVCGKLI+T A+L I CTL++ QQP + AR+ L D AWAA+ LL E C+++ P A+ + AT T ATASA
Sbjct: 15 PPTSLEYLFRRWGLDPALRHYHGRSLGIEHLYPWQARCLALPGVAEGRQDLLYFAPTSGGKTMVAELLLLLRVMG-LPLACSTGEGEDEGRAXXXXXAAVVESGAVTGLPRKDQTATTRRAIIVLPFVSMVTEKAKHLQSIVAPYNRGRPKKKRIQVRALHGAKGGD-LKQAQIAVCTIEKANGLVNRMAAADELHELSCLVVDELHMIGDGGRGQILELLLAKVVRANRGAAVAPAVPQAETDADV--GSNQPAPPRQHTQIVGMSATLSNGAELAKWLGATLHVSDFRPIPLDERVVLGMHVYDKEGFVVREFAAPAHPQSDPDHVVTLCRESCRAG-DQVIIFCSTKQFCHNCA-------------------------------------LKETIPHGVAFHHAGLADTERSAIEKAFRSGTLDVLAATSTLGAGVNLPAGRVILRNINAVGGGLSATSYRQMAGRAGRKGAGRARGEALLIAANKGQAARATGLMNAGLAAVRSALTPTADGGTGFTRMFLEAVCGKLIRTRADLRTGCPAVSSPNITCTLIFHQQPDEAARDRLHDYAWAAIQLLIDEGCVELIQRPTPAVAKPIATATKATASA 583
BLAST of mRNA_H-paniculata_contig550.12967.1 vs. uniprot
Match: A0A6H5L306_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L306_9PHAE) HSP 1 Score: 389 bits (998), Expect = 4.520e-106 Identity = 275/648 (42.44%), Postives = 321/648 (49.54%), Query Frame = 1
Query: 1 PSSSLEELFLRWGLDASLRRYHCRNLGIEHLYPWQARCLAEPGVVEGSRDLLYFAPTSGGKTMVAELVLLLRVAGPLPLVRRSGHASGVGGSDDAWDGMRSGVGEAQNSPAVRRAV--VVLPFISMVTEKVRHLQQVVAPYNRGRPKPKRIK---------------------------------------VKAMYGGKGGGGLRGTHIAVCTIEKANSLVNRMLAAGELHELSCLVLDELHMIGDGGRGQTLELLLTKARQTSVEPVLAPAPMLETVPDLFPGTVSNLPPNKDDSVIGMSATLSNSDELAGWLGAALHVSDYRPIPLDERVLLGMHVYDRAGKVVRTFAERPNPETNPDHVVTLCRRDALAPQDQVIIFCSTKGFCHNCATIVAQNLKMPPSKSVEAKRSALMSQLAKEMSMGVDPILQEIIPHGVAFHHAGLADTERSAIENAFREGTLSVLAATSTLGAGVNLPAGRVILRNLNVSGGGLSATSYRQMAGRAGRKGAGRARGEAVVVATNKGQAGRASALMNAGLAAVKSA---------------LAPTSDGGAGMTRLVLE---AVCGKLIQTEAELD-QYIACTLLWCQQPGDDARESLLDQAWAALHLLQKEDCIQVEPSPLQALHRTTAT 1764
P +SLE LF RWGLD +LR +H R+LGIEHLYPWQA CLA PGV EG +DLLYFAPTSGGKTMVAEL+LLLRV G LPL R +G +D S A+ + VVLPF+SMVTEK +HLQ +VAPYNRGRPK +RI+ V+A++G KGG L+ IAVCTIEKAN LVNRM AA ELHELSCLV+DELHMIGDG RG G+ P + ++GMSATLSN ELA WLGA LHVSD+RPIPLDER++ VIIFCSTK FCHNCA L+E IPHGVAFHHAGLADTERSAIE AFR G L VLAATSTLGAGVNLPAGRVILRN+N GGGLSAT + +G +V V K R + V S L P S R A L+ + L + CTL++ QQP + AR+ L D AWAA+ LL E C+++ P A+ + AT
Sbjct: 5 PPTSLEYLFRRWGLDPALRHHHGRSLGIEHLYPWQASCLALPGVAEGRQDLLYFAPTSGGKTMVAELLLLLRVMG-LPLARSTGEG------EDXXXXXXXXXXAVVESGAITGLLRKVVLPFVSMVTEKAKHLQSIVAPYNRGRPKKQRIQASSSQQHHRQWGEAHHGDDYPARQKRPCVWIVRQIVLEQVRALHGAKGGD-LKHAQIAVCTIEKANGLVNRMAAADELHELSCLVVDELHMIGDGRRGV--------------------------------GSNKPAPLRQHTQIVGMSATLSNGAELAKWLGATLHVSDFRPIPLDERIV-------------------------------------------VIIFCSTKQFCHNCA-------------------------------------LKETIPHGVAFHHAGLADTERSAIEKAFRSGALDVLAATSTLGAGVNLPAGRVILRNINAVGGGLSATRFSSDVV---------VKGGSVAVLDQKKYTTRTARSAEPRFFNVFSCPVLATDEPPHVPTDPLHPPSPSALSSPRPTSACRYAYLKLLLMYRSCLPAMLLKCTLIFHQQPDEAARDRLHDYAWAAIQLLIDEGCVELIQPPTPAVPKPIAT 523
BLAST of mRNA_H-paniculata_contig550.12967.1 vs. uniprot
Match: W7U5L3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L3_9STRA) HSP 1 Score: 335 bits (859), Expect = 2.990e-89 Identity = 219/574 (38.15%), Postives = 306/574 (53.31%), Query Frame = 1
Query: 70 RNLGIEHLYPWQARCLAEPGVVEGSRDLLYFAPTSGGKTMVAELVLLLRVAGPLPLVRRSGHASGVGGSDDAWDGMRSGVGEAQNSPAVRRAVVVLPFISMVTEKVRHLQQVVAPYNRGRPKPKRIKVKAMYGGKGGGGLRGTHIAVCTIEKANSLVNRMLAAGELHELSCLVLDELHMIGDGGRGQTLELLLTKARQTSVEPVLAPAPMLETVPDLFPGTVSNLPPNKDDSVIGMSATLSNSDELAGWLGAALHVSDYRPIPLDERVLLGMHVYDRAGKVVRTFAERPNPETNPDHVVTLCRRDALAPQDQVIIFCSTKGFCHNCATIVAQNLKMPP-----------------SKSVEAKRSALMSQLAKEMSMGVDPILQEIIPHGVAFHHAGLADTERSAIENAFREGTLSVLAATSTLGAGVNLPAGRVILRNLNVSGGGL-SATSYRQMAGRAGRKGAGRARGEAVVVATNKGQAGRASALMNAGLAAVKSALAPTSDGGAGMTRLVLEAVCGKLIQTEAELDQYIACTLLWCQQPGDDAR-ESLLDQAWAALHLLQKEDCIQVEPSP 1734
R GI Y WQ +CL PGVV G R+LLY APTSGGK+ VA+++LL RR+ H ++ ++VLPF+++V EKV H + +V+ YN + + + ++++A +G KGG G I +CTIEKAN+LVN+M+ G +++LSCLV+DELHM+ D RG LELLL+K + P T + N P D +IG+SATL N +E+A W+ AAL + +RP+ L E G ++ G +R R P +PDH+ TL + QV++FC + C NCAT++A+ L + P S R AL+ L +E SM V P L IP G+AFHHAGL D E++A+E AFR G LSV+ ATSTLG G+NLPA RVI R L G + +SYRQMAGRAGR G + GE++++A + A+ LM L + S L P DGG + R +LEA+ +Q +LD ++ CTL Q+ R S L A AL L + ++ P P
Sbjct: 123 RRRGIVRPYDWQCQCLQTPGVVTGERNLLYSAPTSGGKSFVADVLLL----------RRAIHTR-------------------------KKVLLVLPFVAVVREKVAHFKSLVSVYNARKRRREALRIQAFHGNKGGRGFGRCQIGICTIEKANALVNKMIQEGSINQLSCLVVDELHMMADQQRGYLLELLLSKLKFIKALQHCRRGPSDLTTD----AAIDNQGPPLDVQIIGLSATLPNLEEVADWMDAALFHTSFRPVELQEMYKWGDALFAADGVCLRRLQSRRPPAEDPDHITTLVE-ETTRRGHQVLVFCHYRKHCENCATLLAEQLGVLPGAIMANAMTRQKKEDKESDDTVKMRKALLDDL-REHSMSVHPCLLLAIPKGIAFHHAGLTDHEKNALEEAFRRGVLSVIVATSTLGTGINLPAARVIFRTLRPGGNRVFDISSYRQMAGRAGRAGQ-QKYGESILLARSPQDVKEATRLMTEPLHDLHSCLDPEQDGGRALVRAILEAIASGSLQKNDDLDIFLHCTLALRQRIRHSPRLNSFLYYARDALRYLVEHRIVKQLPGP 654
BLAST of mRNA_H-paniculata_contig550.12967.1 vs. uniprot
Match: A0A1D6IVX2_MAIZE (Helicase and polymerase-containing protein TEBICHI n=4 Tax=Zea mays TaxID=4577 RepID=A0A1D6IVX2_MAIZE) HSP 1 Score: 312 bits (799), Expect = 2.030e-83 Identity = 207/541 (38.26%), Postives = 299/541 (55.27%), Query Frame = 1
Query: 79 GIEHLYPWQARCLAEPGVVEGSRDLLYFAPTSGGKTMVAELVLLLRVAGPLPLVRRSGHASGVGGSDDAWDGMRSGVGEAQNSPAVRRAVVVLPFISMVTEKVRHLQQVVAPYNRGRPKPKRIKVKAMYGGKGGGGL-RGTHIAVCTIEKANSLVNRMLAAGELHELSCLVLDELHMIGDGGRGQTLELLLTKARQTSVEPVLAPAPMLETVPDLFPGTVSNLPPNKDDS----VIGMSATLSNSDELAGWLGAALHVSDYRPIPLDERVLLGMHVYDRAGKVVRTFAE-RPNPETNPDHVVTLCRRDALAPQDQVIIFCSTKGFCHNCATIVAQNLKMPP----SKSVEAKRSALMSQLAKEMSMGVDPILQEIIPHGVAFHHAGLADTERSAIENAFREGTLSVLAATSTLGAGVNLPAGRVILRNLNVSGGGLSATSYRQMAGRAGRKGAGRARGEAVVVATNKGQAGRASALMNAGLAAVKSALAPTSDGGAGMTRLVLEAVCGKLIQTEAELDQYIACTLLWCQQPGDDARESLLD 1671
GI LYPWQ CL GV+ G R+L+Y A TS GK+ VAE+++L ++ + +G A++VLP++S+ EK HL+Q++ P R V++ YG +GGG L + T +AVCTIEKANSLVN++L G L EL +V+DELHM+GD RG LEL+LTK R + E L G VS+ K S +IGMSAT+ N +A WL AAL+ +D+RP+PL+E + +G ++D+ VVR + + +PDH+V LC L V++FCS++ C + A VA+ LK+P S E +A + + G+DPIL E +P GVA+HHAGL ER +E+ +R+G + VL ATSTL AGVNLPA RVI R + + T YRQMAGRAGR G +GE+++V + + R + ++ + ++S L S+ GMT ++E V G ++QT ++ +Y+ CTLL +P DD +S D
Sbjct: 501 GISELYPWQVECLLVEGVL-GKRNLVYCASTSAGKSFVAEVLMLRQI-------------------------LSTG----------NMAILVLPYVSICAEKAEHLEQLLEPLGR--------HVRSFYGNQGGGSLPKDTAVAVCTIEKANSLVNKLLEDGRLSELGVIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGTLQSCS----------GEVSSSSSGKIASHGLQIIGMSATMPNIAAVADWLQAALYQTDFRPVPLEEFIKVGNQIFDKDMNVVRVLPKVADHGGKDPDHIVELCNEVVLQGHS-VLLFCSSRKGCESTARHVAKFLKLPSVGTTDVSSEFSDAAAAIEALRRCPAGLDPILGETLPFGVAYHHAGLTVEEREIVESCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPKIGRDFIDGTRYRQMAGRAGRTGID-TKGESILVCRPE-EVKRVTGIIRSNCPPLESCL---SEDKNGMTHAIMEVVAGGIVQTANDIHRYVRCTLLNSTRPFDDVVKSAQD 981
BLAST of mRNA_H-paniculata_contig550.12967.1 vs. uniprot
Match: A0A811STM9_9POAL (Hypothetical protein n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811STM9_9POAL) HSP 1 Score: 313 bits (802), Expect = 1.700e-82 Identity = 204/537 (37.99%), Postives = 300/537 (55.87%), Query Frame = 1
Query: 79 GIEHLYPWQARCLAEPGVVEGSRDLLYFAPTSGGKTMVAELVLLLRVAGPLPLVRRSGHASGVGGSDDAWDGMRSGVGEAQNSPAVRRAVVVLPFISMVTEKVRHLQQVVAPYNRGRPKPKRIKVKAMYGGKGGGGL-RGTHIAVCTIEKANSLVNRMLAAGELHELSCLVLDELHMIGDGGRGQTLELLLTKARQTSVEPVLAPAPMLETVPDLFPGTVSNLPPNKDDSVIGMSATLSNSDELAGWLGAALHVSDYRPIPLDERVLLGMHVYDRAGKVVRTFAERPN-PETNPDHVVTLCRRDALAPQDQVIIFCSTKGFCHNCATIVAQNLKMPPSKSVEAKR----SALMSQLAKEMSMGVDPILQEIIPHGVAFHHAGLADTERSAIENAFREGTLSVLAATSTLGAGVNLPAGRVILRNLNVSGGGLSATSYRQMAGRAGRKGAGRARGEAVVVATNKGQAGRASALMNAGLAAVKSALAPTSDGGAGMTRLVLEAVCGKLIQTEAELDQYIACTLLWCQQPGDDARESLLD 1671
GI LYPWQ CL GV++ R+L+Y A TS GK+ VAE+++L R+ + SG A++VLP++S+ EK HL+Q++ P R V++ YG +GGG L + T +AVCTIEKANSLVN++L G L EL +V+DELHM+GD RG LEL+LTK R + E L ++ G+ S + +IGMSAT+ N +A WL AAL+ +D+RP+PL+E + +G ++D+ VVR + + +PDH+V LC L V++FCS++ C + A VA+ LK+P + S + +A + + G+DPIL E +P GVA+HHAGL ER +E+ +R+G + VL ATSTL AGVNLPA RVI R + + T YRQMAGRAGR G +GE+++V + + R + ++ + ++S L S+ GMT ++E V G ++QT ++ +Y+ CTLL +P DD +S D
Sbjct: 501 GISELYPWQVECLLVEGVLD-KRNLVYCASTSAGKSFVAEVLMLRRI-------------------------LSSG----------NMAILVLPYVSICAEKAEHLEQLLEPLGR--------HVRSFYGNQGGGSLPKDTAVAVCTIEKANSLVNKLLEDGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGTL------QSSSGEISGSSSGKMASHGLQIIGMSATMPNIAAVADWLQAALYQTDFRPVPLEEFIKVGNQIFDKDMNVVRVLPKVADIGGKDPDHIVELCNEVVLQGHS-VLLFCSSRKGCESTARHVAKFLKLPSAGSSDVSSEFSDAAAAIEALRRCPAGLDPILGETLPFGVAYHHAGLTVEEREIVESCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPKIGRDFIDGTRYRQMAGRAGRTGID-TKGESILVCRLE-EVKRITGIIRSNCPPLESCL---SEDKNGMTHAIMEVVAGGIVQTANDIHRYVRCTLLNSTRPFDDVVKSAQD 981
BLAST of mRNA_H-paniculata_contig550.12967.1 vs. uniprot
Match: A0A1D6IVX9_MAIZE (Helicase and polymerase-containing protein TEBICHI n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6IVX9_MAIZE) HSP 1 Score: 312 bits (799), Expect = 1.980e-82 Identity = 207/541 (38.26%), Postives = 299/541 (55.27%), Query Frame = 1
Query: 79 GIEHLYPWQARCLAEPGVVEGSRDLLYFAPTSGGKTMVAELVLLLRVAGPLPLVRRSGHASGVGGSDDAWDGMRSGVGEAQNSPAVRRAVVVLPFISMVTEKVRHLQQVVAPYNRGRPKPKRIKVKAMYGGKGGGGL-RGTHIAVCTIEKANSLVNRMLAAGELHELSCLVLDELHMIGDGGRGQTLELLLTKARQTSVEPVLAPAPMLETVPDLFPGTVSNLPPNKDDS----VIGMSATLSNSDELAGWLGAALHVSDYRPIPLDERVLLGMHVYDRAGKVVRTFAE-RPNPETNPDHVVTLCRRDALAPQDQVIIFCSTKGFCHNCATIVAQNLKMPP----SKSVEAKRSALMSQLAKEMSMGVDPILQEIIPHGVAFHHAGLADTERSAIENAFREGTLSVLAATSTLGAGVNLPAGRVILRNLNVSGGGLSATSYRQMAGRAGRKGAGRARGEAVVVATNKGQAGRASALMNAGLAAVKSALAPTSDGGAGMTRLVLEAVCGKLIQTEAELDQYIACTLLWCQQPGDDARESLLD 1671
GI LYPWQ CL GV+ G R+L+Y A TS GK+ VAE+++L ++ + +G A++VLP++S+ EK HL+Q++ P R V++ YG +GGG L + T +AVCTIEKANSLVN++L G L EL +V+DELHM+GD RG LEL+LTK R + E L G VS+ K S +IGMSAT+ N +A WL AAL+ +D+RP+PL+E + +G ++D+ VVR + + +PDH+V LC L V++FCS++ C + A VA+ LK+P S E +A + + G+DPIL E +P GVA+HHAGL ER +E+ +R+G + VL ATSTL AGVNLPA RVI R + + T YRQMAGRAGR G +GE+++V + + R + ++ + ++S L S+ GMT ++E V G ++QT ++ +Y+ CTLL +P DD +S D
Sbjct: 118 GISELYPWQVECLLVEGVL-GKRNLVYCASTSAGKSFVAEVLMLRQI-------------------------LSTG----------NMAILVLPYVSICAEKAEHLEQLLEPLGR--------HVRSFYGNQGGGSLPKDTAVAVCTIEKANSLVNKLLEDGRLSELGVIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGTLQSCS----------GEVSSSSSGKIASHGLQIIGMSATMPNIAAVADWLQAALYQTDFRPVPLEEFIKVGNQIFDKDMNVVRVLPKVADHGGKDPDHIVELCNEVVLQGHS-VLLFCSSRKGCESTARHVAKFLKLPSVGTTDVSSEFSDAAAAIEALRRCPAGLDPILGETLPFGVAYHHAGLTVEEREIVESCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPKIGRDFIDGTRYRQMAGRAGRTGID-TKGESILVCRPE-EVKRVTGIIRSNCPPLESCL---SEDKNGMTHAIMEVVAGGIVQTANDIHRYVRCTLLNSTRPFDDVVKSAQD 598
BLAST of mRNA_H-paniculata_contig550.12967.1 vs. uniprot
Match: A0A1D6IVY0_MAIZE (Helicase and polymerase-containing protein TEBICHI n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6IVY0_MAIZE) HSP 1 Score: 312 bits (799), Expect = 2.150e-82 Identity = 207/541 (38.26%), Postives = 299/541 (55.27%), Query Frame = 1
Query: 79 GIEHLYPWQARCLAEPGVVEGSRDLLYFAPTSGGKTMVAELVLLLRVAGPLPLVRRSGHASGVGGSDDAWDGMRSGVGEAQNSPAVRRAVVVLPFISMVTEKVRHLQQVVAPYNRGRPKPKRIKVKAMYGGKGGGGL-RGTHIAVCTIEKANSLVNRMLAAGELHELSCLVLDELHMIGDGGRGQTLELLLTKARQTSVEPVLAPAPMLETVPDLFPGTVSNLPPNKDDS----VIGMSATLSNSDELAGWLGAALHVSDYRPIPLDERVLLGMHVYDRAGKVVRTFAE-RPNPETNPDHVVTLCRRDALAPQDQVIIFCSTKGFCHNCATIVAQNLKMPP----SKSVEAKRSALMSQLAKEMSMGVDPILQEIIPHGVAFHHAGLADTERSAIENAFREGTLSVLAATSTLGAGVNLPAGRVILRNLNVSGGGLSATSYRQMAGRAGRKGAGRARGEAVVVATNKGQAGRASALMNAGLAAVKSALAPTSDGGAGMTRLVLEAVCGKLIQTEAELDQYIACTLLWCQQPGDDARESLLD 1671
GI LYPWQ CL GV+ G R+L+Y A TS GK+ VAE+++L ++ + +G A++VLP++S+ EK HL+Q++ P R V++ YG +GGG L + T +AVCTIEKANSLVN++L G L EL +V+DELHM+GD RG LEL+LTK R + E L G VS+ K S +IGMSAT+ N +A WL AAL+ +D+RP+PL+E + +G ++D+ VVR + + +PDH+V LC L V++FCS++ C + A VA+ LK+P S E +A + + G+DPIL E +P GVA+HHAGL ER +E+ +R+G + VL ATSTL AGVNLPA RVI R + + T YRQMAGRAGR G +GE+++V + + R + ++ + ++S L S+ GMT ++E V G ++QT ++ +Y+ CTLL +P DD +S D
Sbjct: 118 GISELYPWQVECLLVEGVL-GKRNLVYCASTSAGKSFVAEVLMLRQI-------------------------LSTG----------NMAILVLPYVSICAEKAEHLEQLLEPLGR--------HVRSFYGNQGGGSLPKDTAVAVCTIEKANSLVNKLLEDGRLSELGVIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGTLQSCS----------GEVSSSSSGKIASHGLQIIGMSATMPNIAAVADWLQAALYQTDFRPVPLEEFIKVGNQIFDKDMNVVRVLPKVADHGGKDPDHIVELCNEVVLQGHS-VLLFCSSRKGCESTARHVAKFLKLPSVGTTDVSSEFSDAAAAIEALRRCPAGLDPILGETLPFGVAYHHAGLTVEEREIVESCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPKIGRDFIDGTRYRQMAGRAGRTGID-TKGESILVCRPE-EVKRVTGIIRSNCPPLESCL---SEDKNGMTHAIMEVVAGGIVQTANDIHRYVRCTLLNSTRPFDDVVKSAQD 598
BLAST of mRNA_H-paniculata_contig550.12967.1 vs. uniprot
Match: A0A7J0GC92_9ERIC (MUS308 and mammalian DNA polymerase-like protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0GC92_9ERIC) HSP 1 Score: 305 bits (781), Expect = 2.720e-82 Identity = 200/541 (36.97%), Postives = 300/541 (55.45%), Query Frame = 1
Query: 70 RNLGIEHLYPWQARCLAEPGVVEGSRDLLYFAPTSGGKTMVAELVLLLRVAGPLPLVRRSGHASGVGGSDDAWDGMRSGVGEAQNSPAVRRAVVVLPFISMVTEKVRHLQQVVAPYNRGRPKPKRIKVKAMYGGKGGGGL-RGTHIAVCTIEKANSLVNRMLAAGELHELSCLVLDELHMIGDGGRGQTLELLLTKARQTSVEPVLAPAPMLETVPDLFPGTVSN-LPPNKDDSVIGMSATLSNSDELAGWLGAALHVSDYRPIPLDERVLLGMHVYDRAGKVVRTFAERPN-PETNPDHVVTLCRRDALAPQDQVIIFCSTKGFCHNCATIVAQNLKMPPSKSVEAKRSALMSQLA----KEMSMGVDPILQEIIPHGVAFHHAGLADTERSAIENAFREGTLSVLAATSTLGAGVNLPAGRVILRNLNVSGGGLSATSYRQMAGRAGRKGAGRARGEAVVVATNKGQAGRASALMNAGLAAVKSALAPTSDGGAGMTRLVLEAVCGKLIQTEAELDQYIACTLLWCQQPGDDARESLLD 1671
+ GI LY WQ CL GV++ R+L+Y A TS GK+ VAE+++L R+ + +G + A++VLP++S+ EK HL+ ++ P + V++ +G +GGG L + T +AVCTIEKANSL+N++L G L E+ +V+DELHM+GD RG LEL+LTK R + E +E+ GT S P ++GMSATL N +A WL AAL+ +D+RP+PL+E + +G +YDR +VRT ++ + +PDH+V +C + + + V++FCS++ C + A V++ L+ P + K +L A + G+DPIL+E +P GVA+HHAGL ER +E +R+G + VL ATSTL AGVNLPA RVI R + + T YRQMAGRAGR G +GE+V++ + R ++N + S L SD GMT +LE V G ++QT +++ +Y+ CTLL +P +D +S D
Sbjct: 453 KKRGISKLYSWQVDCLQVDGVLQ-KRNLVYCASTSAGKSFVAEILMLRRI-------------------------LLTG----------KMALLVLPYVSICAEKAEHLEALLEPLGK--------HVRSYFGNQGGGALPKDTSVAVCTIEKANSLINKLLEEGRLSEVGIIVIDELHMVGDQSRGYLLELMLTKLRYAAGEG------NVESSSGESSGTSSGKTDPAHGLQIVGMSATLPNVSAVADWLQAALYQTDFRPVPLEEYIKIGNTIYDRKMDIVRTMSKTADLGGKDPDHIVEMCN-EVVQEGNSVLLFCSSRKGCESTARHVSKFLRKFPVSAHNDKSESLDITSAIDALRRCPAGLDPILEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRAGID-TKGESVLIC-KPDEVKRIMGILNDSCPPLHSCL---SDDKNGMTHAILEVVAGAIVQTASDIHRYVRCTLLNSTKPFEDVVKSAQD 937
BLAST of mRNA_H-paniculata_contig550.12967.1 vs. uniprot
Match: A0A1D6IVX5_MAIZE (Helicase and polymerase-containing protein TEBICHI n=17 Tax=Zea mays TaxID=4577 RepID=A0A1D6IVX5_MAIZE) HSP 1 Score: 312 bits (799), Expect = 4.200e-82 Identity = 207/541 (38.26%), Postives = 299/541 (55.27%), Query Frame = 1
Query: 79 GIEHLYPWQARCLAEPGVVEGSRDLLYFAPTSGGKTMVAELVLLLRVAGPLPLVRRSGHASGVGGSDDAWDGMRSGVGEAQNSPAVRRAVVVLPFISMVTEKVRHLQQVVAPYNRGRPKPKRIKVKAMYGGKGGGGL-RGTHIAVCTIEKANSLVNRMLAAGELHELSCLVLDELHMIGDGGRGQTLELLLTKARQTSVEPVLAPAPMLETVPDLFPGTVSNLPPNKDDS----VIGMSATLSNSDELAGWLGAALHVSDYRPIPLDERVLLGMHVYDRAGKVVRTFAE-RPNPETNPDHVVTLCRRDALAPQDQVIIFCSTKGFCHNCATIVAQNLKMPP----SKSVEAKRSALMSQLAKEMSMGVDPILQEIIPHGVAFHHAGLADTERSAIENAFREGTLSVLAATSTLGAGVNLPAGRVILRNLNVSGGGLSATSYRQMAGRAGRKGAGRARGEAVVVATNKGQAGRASALMNAGLAAVKSALAPTSDGGAGMTRLVLEAVCGKLIQTEAELDQYIACTLLWCQQPGDDARESLLD 1671
GI LYPWQ CL GV+ G R+L+Y A TS GK+ VAE+++L ++ + +G A++VLP++S+ EK HL+Q++ P R V++ YG +GGG L + T +AVCTIEKANSLVN++L G L EL +V+DELHM+GD RG LEL+LTK R + E L G VS+ K S +IGMSAT+ N +A WL AAL+ +D+RP+PL+E + +G ++D+ VVR + + +PDH+V LC L V++FCS++ C + A VA+ LK+P S E +A + + G+DPIL E +P GVA+HHAGL ER +E+ +R+G + VL ATSTL AGVNLPA RVI R + + T YRQMAGRAGR G +GE+++V + + R + ++ + ++S L S+ GMT ++E V G ++QT ++ +Y+ CTLL +P DD +S D
Sbjct: 506 GISELYPWQVECLLVEGVL-GKRNLVYCASTSAGKSFVAEVLMLRQI-------------------------LSTG----------NMAILVLPYVSICAEKAEHLEQLLEPLGR--------HVRSFYGNQGGGSLPKDTAVAVCTIEKANSLVNKLLEDGRLSELGVIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGTLQSCS----------GEVSSSSSGKIASHGLQIIGMSATMPNIAAVADWLQAALYQTDFRPVPLEEFIKVGNQIFDKDMNVVRVLPKVADHGGKDPDHIVELCNEVVLQGHS-VLLFCSSRKGCESTARHVAKFLKLPSVGTTDVSSEFSDAAAAIEALRRCPAGLDPILGETLPFGVAYHHAGLTVEEREIVESCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPKIGRDFIDGTRYRQMAGRAGRTGID-TKGESILVCRPE-EVKRVTGIIRSNCPPLESCL---SEDKNGMTHAIMEVVAGGIVQTANDIHRYVRCTLLNSTRPFDDVVKSAQD 986
BLAST of mRNA_H-paniculata_contig550.12967.1 vs. uniprot
Match: K3Z327_SETIT (Uncharacterized protein n=18 Tax=Paniceae TaxID=147428 RepID=K3Z327_SETIT) HSP 1 Score: 311 bits (798), Expect = 5.350e-82 Identity = 204/537 (37.99%), Postives = 299/537 (55.68%), Query Frame = 1
Query: 79 GIEHLYPWQARCLAEPGVVEGSRDLLYFAPTSGGKTMVAELVLLLRVAGPLPLVRRSGHASGVGGSDDAWDGMRSGVGEAQNSPAVRRAVVVLPFISMVTEKVRHLQQVVAPYNRGRPKPKRIKVKAMYGGKGGGGL-RGTHIAVCTIEKANSLVNRMLAAGELHELSCLVLDELHMIGDGGRGQTLELLLTKARQTSVEPVLAPAPMLETVPDLFPGTVSNLPPNKDDSVIGMSATLSNSDELAGWLGAALHVSDYRPIPLDERVLLGMHVYDRAGKVVRTFAERPN-PETNPDHVVTLCRRDALAPQDQVIIFCSTKGFCHNCATIVAQNLKM----PPSKSVEAKRSALMSQLAKEMSMGVDPILQEIIPHGVAFHHAGLADTERSAIENAFREGTLSVLAATSTLGAGVNLPAGRVILRNLNVSGGGLSATSYRQMAGRAGRKGAGRARGEAVVVATNKGQAGRASALMNAGLAAVKSALAPTSDGGAGMTRLVLEAVCGKLIQTEAELDQYIACTLLWCQQPGDDARESLLD 1671
GI LYPWQ CL GV+E R+L+Y A TS GK+ VAE+++L R+ + SG A++VLP++S+ EK HL+Q++ P R V++ YG +GGG L + T +AVCTIEKANSLVN++L G L EL +V+DELHM+GD RG LEL+LTK R + E E+ G+ S +IGMSAT+ N +A WL AAL+ +D+RP+PL+E + +G ++D+A VVR + + +PDH+V +C L V++FCS++ C + A VA+ LK+ P S E +A + G+DP+L+E +P GVA+HHAGL ER +E+ +R+G + VL ATSTL AGVNLPA RVI R + + T YRQM+GRAGR G +GE+++V + + R + ++ + ++S L S+ GMT ++E V G ++QT ++++Y+ CTLL +P DD +S D
Sbjct: 467 GISELYPWQVECLLVDGVLE-KRNLVYCASTSAGKSFVAEVLMLRRI-------------------------LSSG----------NMAILVLPYVSICAEKAEHLEQLLEPLGR--------HVRSFYGNQGGGSLPKDTAVAVCTIEKANSLVNKLLEDGRLSELGVIVIDELHMVGDQHRGYLLELMLTKLRYAAGEG------NSESSSGETSGSSSGKMSTHGLQIIGMSATMPNVAAVADWLQAALYQTDFRPVPLEEFIKVGNQIFDKAMNVVRILPKVADLGGKDPDHIVEMCNEVVLQGHS-VLLFCSSRKGCESTARHVAKFLKITSVGPSDVSSEFSDAASAIDALRRCPSGLDPVLEETLPFGVAYHHAGLTVEEREIVESCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPKIGRDFIDGTRYRQMSGRAGRTGID-TKGESILVCKPE-EVKRITGIIRSNCPPLESCL---SEDKNGMTHAIMEVVAGGIVQTANDINRYVRCTLLNSTKPFDDVVKSAQD 947 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig550.12967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig550.12967.1 >prot_H-paniculata_contig550.12967.1 ID=prot_H-paniculata_contig550.12967.1|Name=mRNA_H-paniculata_contig550.12967.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=656bp PSSSLEELFLRWGLDASLRRYHCRNLGIEHLYPWQARCLAEPGVVEGSRDback to top mRNA from alignment at H-paniculata_contig550:4247..20776+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig550.12967.1 ID=mRNA_H-paniculata_contig550.12967.1|Name=mRNA_H-paniculata_contig550.12967.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=16530bp|location=Sequence derived from alignment at H-paniculata_contig550:4247..20776+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig550:4247..20776+ >mRNA_H-paniculata_contig550.12967.1 ID=mRNA_H-paniculata_contig550.12967.1|Name=mRNA_H-paniculata_contig550.12967.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3936bp|location=Sequence derived from alignment at H-paniculata_contig550:4247..20776+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |