prot_H-paniculata_contig55.12964.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig55.12964.1
Unique Nameprot_H-paniculata_contig55.12964.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1414
Homology
BLAST of mRNA_H-paniculata_contig55.12964.1 vs. uniprot
Match: D7FHB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB0_ECTSI)

HSP 1 Score: 376 bits (966), Expect = 2.890e-106
Identity = 351/991 (35.42%), Postives = 468/991 (47.23%), Query Frame = 0
Query:    1 MGIRGLSSYVTACQRSCSEHVEL---GILEDSDGSSQPQAGGVVQRLAVDGLALVYHVMKNTKDRRLYLELGCDYETLAAALLDYLSALTNAGITPVVIVDGMQDTEKSATTVLRRRAQVEEAS---ILMERIGEIGVSECTASGSGPIFRYANRLSLLPLFAAETLAAACQAAGVAFRVADREADPELAAACRSYPRPSDENSVNGTKVLPV--GRGSEVGDERWIGGCDAVLSNDSDFLVMDIPGYIPFWALGLGGDGSAGALVFRRHKLAARLGIPADRLPDLACLIGNDWIQPGDRVHGIIMRDRAGSVPIST----------SKNQNTSRGEFKKRRKGSGGGTPSGTN--SSAPSAKDLVEATARFLSRFYEQQRQHQEEAGAKASVKFRITSWTGEGKHLFQEDCKNNTELNRHRSNRREQPLQKCETTAHVRHATAPRQESIGAEEDEGAASDPLDASLCRRFFPHRPPSGGGNDVDTIEPLACG-----PTITTASTTTSSDRPVAVPRKKNVKRSGKGKGIKVKR--GSSRCVAKTASFERVGGEEERGSGSGGGREDERGV--DFGDSEIFLQKFRAAKRHFERTQIPATPRNRRREDCSNENLRRGGSAGECSAVTVGAEGISQAR-GLLTGLSVPPELVQAVLEGVFWCRVMLEDVSIREEKLSPTTRSQPHMQGCRDYTVLPVSPAMSPLPIEDPLPEDYSCITKPHSPTGQGADQELLASLLVEKSYTLFDSPFRDGNTGDHSPARADMLSRR---DGSAFGSFSEVRIRLYELCLALQPDLAERPMIVGRRSSSMGQESNLGQKREISRNCRQERADESPRFKEEGCGIGLPVEETSSALKSRAALRQREHIRNEGEEGTSTDSEGGGEEVVGGVDASIRSQGPAEGGRNR-EVPTG-----DRQWVVNEMRCVGSNVKAVAVLCQVPPPLMLPTATLDVSSGGYMDMTRWKLLLSVLNLGDRDNCQLTALIMAE 952
            MG+RGLSSYVT CQR+CSEHV+L   G   D+  +S  +   V   LAVDGLALVYH+M+N     L LELGCDY +L  ALL YLSALTNAG++ +V+VDGMQD EK ATT+ RRR+Q  +AS   +LM+  GE         G+   F   +  SLLPLFA ETL AAC +AGV+ R ADREADPELAAAC+   R  D     G    P     G  VG +   GGCDAVLSNDSDFLVMDIPGYIPFW+LG+G DGSAGALVFRR  +AARLGIPAD +PDLACL+GNDWIQP + VH IIM+  A                 + N           R+G  G   S +N  + + SAK LVEATAR+LS F    +  ++  GA  +V     S  G   H                           +   H+          +  E D+    +     LC RFFP    + G N  ++    A G     P    A T+++       P+++   R+ KGKG K KR  G+ R    T      GG+ + G G      +E     +  D E FL+ F AA+ H+E     A   ++  ++  +  L   G A      TV   G+  +R GL  G+  PPE+ QAVLEGVFWCR+MLED    E  +          +   D T  P  P  +            S      S   +G  +  LA L+   +   F S        DHS  R+ +++ +   + SA  S     +   E C A     +  P    + +++   E++                  S +                      AA  +    R     G+    +GG +      + ++  +  A  GR R ++P G       ++VV E R VG+ VKA  V+C+VP       A+L +S+   + M RW L LS L L  RDN  LTAL+ +E
Sbjct:    1 MGVRGLSSYVTGCQRACSEHVDLNYGGSDRDTPSASDQRDDPV--SLAVDGLALVYHIMQNAGAHDLCLELGCDYRSLHDALLGYLSALTNAGVSLLVVVDGMQDCEKEATTLERRRSQAADASEAMVLMQPGGE---------GTDAAFLQQHCSSLLPLFAVETLMAACISAGVSIRSADREADPELAAACQGNTRSVD--GGRGQHRCPELDDAGGGVGVK---GGCDAVLSNDSDFLVMDIPGYIPFWSLGVGADGSAGALVFRRTLVAARLGIPADWMPDLACLVGNDWIQPENHVHRIIMQSAAXXXXXXXXXXXXXXXXXAHNAGALASSSAPWRRGCNGNGISSSNGLTVSASAKHLVEATARYLSEFLRHTQVPRDRCGANDAVS---PSQVGPATH--------------------------GDDRGHL----------LAGEADQSMTRE-----LCARFFPAL--TAGRNGGESGAEGAHGQDQASPQTGLAGTSSTKSAGHRAPKQQRASRARKGKGHKNKRPSGNDRVGGSTTGCGSRGGQRDAGIGEEDAAREEMDAVGEEEDGESFLRGFLAARLHYEVPPFRAAGEDQAEDETLSPPLSTTGFA-----ATVSGRGLVLSRVGLRAGIWAPPEIAQAVLEGVFWCRMMLEDSVALENAVD---------EPAADSTE-PTRPTGTDATXXXXXXXXSSAFAS-FSGVRKGIYEVYLAQLVGVWTAGCFSSA---ATQDDHSRDRSMVVATQGFLNNSAGNSAQSAVLGFRERCAAFDSGGSAVPRREPQTAAASLPEASTA----------------STQAPXXXXXXXXXXXXXXXXXXXXAAAVEPLGSRQVVAGGSDKQHQGGDKPRRFNENDALGPRAAAVAGRRRHDLPPGRVTREGDEFVVREFRRVGTGVKAFRVVCKVP-------ASLRLSASTSLPM-RWTLCLSTLGLARRDNRLLTALMDSE 886          
BLAST of mRNA_H-paniculata_contig55.12964.1 vs. uniprot
Match: A0A6H5KA26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA26_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 7.800e-79
Identity = 336/1043 (32.21%), Postives = 436/1043 (41.80%), Query Frame = 0
Query:    1 MGIRGLSSYVTACQRSCSEHVELGIL-EDSDGSSQPQAGGVVQRLAVDGLALVYHVMKNTKDRRLYLELGCDYETLAAALLDYLSALTNAGITPVVIVDGMQDTEKSATTVLRRRAQVEEAS---ILMERIGEIGVSECTASGSGPIFRYANRLSLLPLFAAETLAAACQAAGVAFRVADREADPELAAACRSYPRPSDENSVNGTKVLPVGRGSEVGDERWIGGCDAVLSNDSDFLVMDIPGYIPFWALGLGGDGSAGALVFRRHKLAARLGIPADRLPDLACLIGNDWIQPGDRVH---------GII-MRDRAGSVPIST-------SKNQNTSRG---EFKKRRKGSG----------------GGTPSGTNSS-----APSAKDLVEATARFLSRFYEQQRQHQEEAGAKASVKFRITSWTGEGKHLFQEDCKNNTELNRHRSNRREQPLQKCETTAHVRHATAPRQESIGAEEDE------GAASDPLDASLCRRFFPHRPPSGGGNDVDTIEPLACGPTITTASTTTSSDRPVA---VPRKKNVKRSGKGKGIKVKR--GSSRCVAKTASFERVGGEEERGSG---SGGGREDERGVDFGDSEIFLQKFRAAKRHFERTQIPATPRNRRREDCSNENLRRGGSAGECSAVTVGAEGISQAR-GLLTGLSVPPELVQAVLEGVFWCRVMLED-VSIREEKLSPTTRSQPHMQGCRDYTVLPVSPAMSPLPIEDPLPEDYSCITKPHSPTGQGADQELLASLLVEKSYTLFDSPFRDGNTGDHSPARADMLSRRDGSAFGSFSEVRIRLYELCLALQPDLA-ERPMIVGRRSSSMGQESNLGQKREIS--RNCRQERADES--PRFKEEGCGIGLPVEETSS----ALKSRAALRQREHIRNEGEEGTSTDSEGGGEEVVGGVDASIR------------SQGPAE----GGRNREVPTG-----DRQWVVNEMRCVGSNVKAVAVLCQVPPPLMLPTATLDVSSGGYMDMTRWKLLLSVLNLGDRDNCQLTALIMAE 952
            MG+RGLSSYVT CQR+CSEHV+L     D D +S     G V  LAVDGLALVYH+M+N     L LELG DY+                               K ATT+ RRR+Q  +AS   +LM+  GE         G+   F   +  SLLPLFA ETLAAAC +AGV+ R ADREADPELAAAC+   R  D              G  VG E   GGCDAVLSNDSDFLVMDIPGYIPFW+LG+G DGSAGALVFRR  +AARLGIPAD +PDLACL+GNDWIQP + VH         G I + D   S  +S         ++  TS G     +++RKG+                 GG  +G++SS     A SAK LVEATAR+LS F    +  ++  G                                                  V  A +P Q       D+      G A   +   LC RFFP       G                                 P++        GKG K KR  G+ R    T      GG+ + G G   +  G  D  G +  D E FL++F AA+ H+E   + A   ++  ++  +  L   G A      TV   G+  +R GL  G+  PPE+ QAVLEGVFWCR+MLED V++    + P            DYT                         +P  PTG  +     A+     S++   + F     G +    A ++  R    F               A Q D + +R M+V           N  Q   +S    C    +  S  PR + +     LP   T+S    A                     + +  G  + V GG D   R            + GP      G R  ++P G       ++VV E R VG+ VK   V+C+ P       A+L +S+   + M RW L LS L L  RDN  LTAL+ +E
Sbjct:    1 MGVRGLSSYVTGCQRACSEHVDLNYGGSDRDTTSAADRDGPVS-LAVDGLALVYHIMQNAGVHDLRLELGWDYD-------------------------------KEATTLERRRSQAADASEVMVLMQPGGE---------GTDATFLQQHCSSLLPLFAVETLAAACISAGVSIRSADREADPELAAACQGNARSVDSGRRRHRCPALDDAGGGVGVE---GGCDAVLSNDSDFLVMDIPGYIPFWSLGVGADGSAGALVFRRTLVAARLGIPADWMPDLACLVGNDWIQPENHVHRRGQLYSDVGFIELPDHPPSFCLSPIGLVRVIMQSAATSAGCNSGHERKRKGTAAHNAGALASSSAPWRRGGNGNGSSSSNGLTGAASAKHLVEATARYLSEFLRHNKVPRDRCG--------------------------------------------------VNDAVSPSQVDPATGGDDRGRLLAGEADQSMTRELCARFFPALTAGRSGGVSXXXXXXXXXXXXXXXXXXXXXXXXXXGHRAPKQXXXXXXXXGKGHKNKRPSGNDRGGGSTTGCGSRGGQRDAGMGEEDAARGGIDAVGEEE-DGESFLREFLAARLHYEVPPLCAAGEDQAEDETLSHPLATTGLA-----ATVSGGGLVLSRVGLRAGIWAPPEIAQAVLEGVFWCRMMLEDSVALENAVIEPAA----------DYT-------------------------EPTRPTGTDSTPSGTAA-----SHSSAFASFSGVRKGIYEVCLAQLVGVRTAGCFS------------WAATQDDHSRDRSMVVATEGLLNDSAGNSAQSAVLSFRERCAAFASGGSAVPRREPQTTAASLPKASTASIQAPAXXXXXXXXXXXXXXXXAVAAAAAEPLGSRQIVAGGSDKQRRRGDKPRRFNGNDALGPRAAAVVGRRRHDLPPGRVTREGDEFVVREFRRVGTGVKTFRVVCKAP-------ASLRLSASTSLPM-RWNLCLSTLGLARRDNRLLTALMDSE 883          
BLAST of mRNA_H-paniculata_contig55.12964.1 vs. uniprot
Match: A0A835Z4Q9_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q9_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.210e-16
Identity = 68/148 (45.95%), Postives = 86/148 (58.11%), Query Frame = 0
Query:   44 LAVDGLALVYHVM---KNTKDRRLYLELGCDYETLAAALLDYLSALTNAGITPVVIVDGMQDTEKSATTVLRRRAQVEEASILMERIGEIGVSECTASGSGPIFRYANRLSLLPLFAAETLAAACQAAGVAFRVADREADPELAAACR 188
            LAVDG+AL YH++    ++    L L LG DY    A +  YL AL +  +T  V++DGMQ+ +K+ATT  RRRAQV+EA   +  I   GV+   A G+     +A R  LLPLFA E LA AC A GV   VA READ  LA   R
Sbjct:  281 LAVDGVALCYHMITIHSHSASPCLCLSLGGDYRAFTAHITRYLQALLSHDVTLHVVLDGMQEADKAATTRDRRRAQVQEARDTVRCIARCGVA---AEGAE---HWAAREKLLPLFATECLARACSALGVGCVVAAREADRRLALIAR 422          
BLAST of mRNA_H-paniculata_contig55.12964.1 vs. uniprot
Match: A0A3P8ZEU5_ESOLU (Protein asteroid homolog 1-like n=2 Tax=Esox lucius TaxID=8010 RepID=A0A3P8ZEU5_ESOLU)

HSP 1 Score: 65.1 bits (157), Expect = 9.570e-7
Identity = 79/295 (26.78%), Postives = 114/295 (38.64%), Query Frame = 0
Query:    1 MGIRGLSSYVTACQRSCSEHVELGILEDSDGSSQPQAGGVVQRLAVDGLALVYHVMKNTKDRRLYLELGCDYETLAAALLDYLSALTNAGITPVVIVDGMQDTEKSATTVLRRRAQVEEASILMERIGEIGVSECTASGSGPIFRYANRLSLLPLFAAETLAAACQAAGVAFRVADREADPELAAACRSYPRPSDENSVNGTKVLPVGRGSEVGDERWIGGCDAVLSNDSDFLVMDIPG-YIPF----WALGLGGDGSAGALVFRRHKLAARL----GIPADRLPDLACLIGNDW 286
            MG+ GL+SYV    R   + V+     DS             RL +DG +L + +  N    + +   G DY+T AA L  ++SAL    + P V++DG  D      + LR+R Q            +I  +E  + G           S+LPL             GV       EAD E+A     +  P                               VL+NDSDF + D+PG YIPF    WA  +GG      +  RR+ ++       G+  + LP  A L GND+
Sbjct:    1 MGVHGLTSYVEG-NRGFFQEVKF---RDS-------------RLVIDGSSLFFKLYLNNGLDQAH---GGDYDTFAALLSTFISALEACNVQPFVVLDGGMDPSDKKLSTLRQRMQ-----------SKIREAESLSRGQHG--------SVLPLLTRHVFIQVLSQRGVPLVQCPAEADWEIACLANQWACP-------------------------------VLTNDSDFYIFDLPGGYIPFQFFQWA-NVGGSSPNRYISARRYTVSGLCRHFGGMNRELLPLCAVLAGNDY 224          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig55.12964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FHB0_ECTSI2.890e-10635.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KA26_9PHAE7.800e-7932.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z4Q9_9STRA2.210e-1645.95S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A3P8ZEU5_ESOLU9.570e-726.78Protein asteroid homolog 1-like n=2 Tax=Esox luciu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006085XPG N-terminalSMARTSM00485xpgn3coord: 1..119
e-value: 0.0099
score: 7.6
NoneNo IPR availableGENE3D3.40.50.1010coord: 2..296
e-value: 1.7E-11
score: 45.8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..984
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 985..1006
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1007..1413
IPR026832AsteroidPANTHERPTHR15665ASTEROID PROTEINcoord: 1..186
coord: 220..289
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 1..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig55contigH-paniculata_contig55:18694..32746 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig55.12964.1mRNA_H-paniculata_contig55.12964.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig55 18593..32777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig55.12964.1 ID=prot_H-paniculata_contig55.12964.1|Name=mRNA_H-paniculata_contig55.12964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1414bp
MGIRGLSSYVTACQRSCSEHVELGILEDSDGSSQPQAGGVVQRLAVDGLA
LVYHVMKNTKDRRLYLELGCDYETLAAALLDYLSALTNAGITPVVIVDGM
QDTEKSATTVLRRRAQVEEASILMERIGEIGVSECTASGSGPIFRYANRL
SLLPLFAAETLAAACQAAGVAFRVADREADPELAAACRSYPRPSDENSVN
GTKVLPVGRGSEVGDERWIGGCDAVLSNDSDFLVMDIPGYIPFWALGLGG
DGSAGALVFRRHKLAARLGIPADRLPDLACLIGNDWIQPGDRVHGIIMRD
RAGSVPISTSKNQNTSRGEFKKRRKGSGGGTPSGTNSSAPSAKDLVEATA
RFLSRFYEQQRQHQEEAGAKASVKFRITSWTGEGKHLFQEDCKNNTELNR
HRSNRREQPLQKCETTAHVRHATAPRQESIGAEEDEGAASDPLDASLCRR
FFPHRPPSGGGNDVDTIEPLACGPTITTASTTTSSDRPVAVPRKKNVKRS
GKGKGIKVKRGSSRCVAKTASFERVGGEEERGSGSGGGREDERGVDFGDS
EIFLQKFRAAKRHFERTQIPATPRNRRREDCSNENLRRGGSAGECSAVTV
GAEGISQARGLLTGLSVPPELVQAVLEGVFWCRVMLEDVSIREEKLSPTT
RSQPHMQGCRDYTVLPVSPAMSPLPIEDPLPEDYSCITKPHSPTGQGADQ
ELLASLLVEKSYTLFDSPFRDGNTGDHSPARADMLSRRDGSAFGSFSEVR
IRLYELCLALQPDLAERPMIVGRRSSSMGQESNLGQKREISRNCRQERAD
ESPRFKEEGCGIGLPVEETSSALKSRAALRQREHIRNEGEEGTSTDSEGG
GEEVVGGVDASIRSQGPAEGGRNREVPTGDRQWVVNEMRCVGSNVKAVAV
LCQVPPPLMLPTATLDVSSGGYMDMTRWKLLLSVLNLGDRDNCQLTALIM
AEAGKSFVDDAARGVTQGRTGQRQKKNRKEGGERYYLAGIAVVAALLLST
SLPPVIATPQSSNSGGARLMCCSNEIALAFIVAATRCAHPPYSFPTAKVN
PGSTSCGDFGRATSQRKETMPPTPTLSGCTADSYGCVCPYQTNGLDHPGT
TSDKGTAPAPYGGRCSKGGQVRYGGDRRYADGTSGSGKTPLNEVRSRISH
RGDTPETDNVPKTICQVCMGRVNGVKKTAVNDVTEVDGDVDRRFVSLWSH
VQAAVWHTNACHSLLGFNFSDPATGSGKGNKRRNFALDPLLLRPVLALKY
YRKRRRCLQRSRQHQSWGNSCDARQHEKQATLQAANIQLEQQEHVTPPHS
YSCNHEDSSQILLMPGKERYRSKQQVQPTGNGGSLRLGNDNGSSDERIQE
CGVFTPSQGQQGWQQDELGCLERPPLELPTEEVFHCGVGQTCRGTCSWAQ
RVRTVMDAAGVVY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006085XPG_DNA_repair_N
IPR026832Asteroid
IPR029060PIN-like_dom_sf