mRNA_H-paniculata_contig55.12964.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig55.12964.1 vs. uniprot
Match: D7FHB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB0_ECTSI) HSP 1 Score: 377 bits (967), Expect = 3.450e-106 Identity = 351/991 (35.42%), Postives = 468/991 (47.23%), Query Frame = 2
Query: 32 MGIRGLSSYVTACQRSCSEHVEL---GILEDSDGSSQPQAGGVVQRLAVDGLALVYHVMKNTKDRRLYLELGCDYETLAAALLDYLSALTNAGITPVVIVDGMQDTEKSATTVLRRRAQVEEAS---ILMERIGEIGVSECTASGSGPIFRYANRLSLLPLFAAETLAAACQAAGVAFRVADREADPELAAACRSYPRPSDENSVNGTKVLPV--GRGSEVGDERWIGGCDAVLSNDSDFLVMDIPGYIPFWALGLGGDGSAGALVFRRHKLAARLGIPADRLPDLACLIGNDWIQPGDRVHGIIMRDRAGSVPIST----------SKNQNTSRGEFKKRRKGSGGGTPSGTN--SSAPSAKDLVEATARFLSRFYEQQRQHQEEAGAKASVKFRITSWTGEGKHLFQEDCKNNTELNRHRSNRREQPLQKCETTAHVRHATAPRQESIGAEEDEGAASDPLDASLCRRFFPHRPPSGGGNDVDTIEPLACG-----PTITTASTTTSSDRPVAVPRKKNVKRSGKGKGIKVKR--GSSRCVAKTASFERVGGEEERGSGSGGGREDERGV--DFGDSEIFLQKFRAAKRHFERTQIPATPRNRRREDCSNENLRRGGSAGECSAVTVGAEGISQAR-GLLTGLSVPPELVQAVLEGVFWCRVMLEDVSIREEKLSPTTRSQPHMQGCRDYTVLPVSPAMSPLPIEDPLPEDYSCITKPHSPTGQGADQELLASLLVEKSYTLFDSPFRDGNTGDHSPARADMLSRR---DGSAFGSFSEVRIRLYELCLALQPDLAERPMIVGRRSSSMGQESNLGQKREISRNCRQERADESPRFKEEGCGIGLPVEETSSALKSRAALRQREHIRNEGEEGTSTDSEGGGEEVVGGVDASIRSQGPAEGGRNR-EVPTG-----DRQWVVNEMRCVGSNVKAVAVLCQVPPPLMLPTATLDVSSGGYMDMTRWKLLLSVLNLGDRDNCQLTALIMAE 2887
MG+RGLSSYVT CQR+CSEHV+L G D+ +S + V LAVDGLALVYH+M+N L LELGCDY +L ALL YLSALTNAG++ +V+VDGMQD EK ATT+ RRR+Q +AS +LM+ GE G+ F + SLLPLFA ETL AAC +AGV+ R ADREADPELAAAC+ R D G P G VG + GGCDAVLSNDSDFLVMDIPGYIPFW+LG+G DGSAGALVFRR +AARLGIPAD +PDLACL+GNDWIQP + VH IIM+ A + N R+G G S +N + + SAK LVEATAR+LS F + ++ GA +V S G H + H+ + E D+ + LC RFFP + G N ++ A G P A T+++ P+++ R+ KGKG K KR G+ R T GG+ + G G +E + D E FL+ F AA+ H+E A ++ ++ + L G A TV G+ +R GL G+ PPE+ QAVLEGVFWCR+MLED E + + D T P P + S S +G + LA L+ + F S DHS R+ +++ + + SA S + E C A + P + +++ E++ S + AA + R G+ +GG + + ++ + A GR R ++P G ++VV E R VG+ VKA V+C+VP A+L +S+ + M RW L LS L L RDN LTAL+ +E
Sbjct: 1 MGVRGLSSYVTGCQRACSEHVDLNYGGSDRDTPSASDQRDDPV--SLAVDGLALVYHIMQNAGAHDLCLELGCDYRSLHDALLGYLSALTNAGVSLLVVVDGMQDCEKEATTLERRRSQAADASEAMVLMQPGGE---------GTDAAFLQQHCSSLLPLFAVETLMAACISAGVSIRSADREADPELAAACQGNTRSVD--GGRGQHRCPELDDAGGGVGVK---GGCDAVLSNDSDFLVMDIPGYIPFWSLGVGADGSAGALVFRRTLVAARLGIPADWMPDLACLVGNDWIQPENHVHRIIMQSAAXXXXXXXXXXXXXXXXXAHNAGALASSSAPWRRGCNGNGISSSNGLTVSASAKHLVEATARYLSEFLRHTQVPRDRCGANDAVS---PSQVGPATH--------------------------GDDRGHL----------LAGEADQSMTRE-----LCARFFPAL--TAGRNGGESGAEGAHGQDQASPQTGLAGTSSTKSAGHRAPKQQRASRARKGKGHKNKRPSGNDRVGGSTTGCGSRGGQRDAGIGEEDAAREEMDAVGEEEDGESFLRGFLAARLHYEVPPFRAAGEDQAEDETLSPPLSTTGFA-----ATVSGRGLVLSRVGLRAGIWAPPEIAQAVLEGVFWCRMMLEDSVALENAVD---------EPAADSTE-PTRPTGTDATXXXXXXXXSSAFAS-FSGVRKGIYEVYLAQLVGVWTAGCFSSA---ATQDDHSRDRSMVVATQGFLNNSAGNSAQSAVLGFRERCAAFDSGGSAVPRREPQTAAASLPEASTA----------------STQAPXXXXXXXXXXXXXXXXXXXXAAAVEPLGSRQVVAGGSDKQHQGGDKPRRFNENDALGPRAAAVAGRRRHDLPPGRVTREGDEFVVREFRRVGTGVKAFRVVCKVP-------ASLRLSASTSLPM-RWTLCLSTLGLARRDNRLLTALMDSE 886
BLAST of mRNA_H-paniculata_contig55.12964.1 vs. uniprot
Match: A0A6H5KA26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA26_9PHAE) HSP 1 Score: 297 bits (761), Expect = 7.250e-79 Identity = 336/1043 (32.21%), Postives = 436/1043 (41.80%), Query Frame = 2
Query: 32 MGIRGLSSYVTACQRSCSEHVELGIL-EDSDGSSQPQAGGVVQRLAVDGLALVYHVMKNTKDRRLYLELGCDYETLAAALLDYLSALTNAGITPVVIVDGMQDTEKSATTVLRRRAQVEEAS---ILMERIGEIGVSECTASGSGPIFRYANRLSLLPLFAAETLAAACQAAGVAFRVADREADPELAAACRSYPRPSDENSVNGTKVLPVGRGSEVGDERWIGGCDAVLSNDSDFLVMDIPGYIPFWALGLGGDGSAGALVFRRHKLAARLGIPADRLPDLACLIGNDWIQPGDRVH---------GII-MRDRAGSVPIST-------SKNQNTSRG---EFKKRRKGSG----------------GGTPSGTNSS-----APSAKDLVEATARFLSRFYEQQRQHQEEAGAKASVKFRITSWTGEGKHLFQEDCKNNTELNRHRSNRREQPLQKCETTAHVRHATAPRQESIGAEEDE------GAASDPLDASLCRRFFPHRPPSGGGNDVDTIEPLACGPTITTASTTTSSDRPVA---VPRKKNVKRSGKGKGIKVKR--GSSRCVAKTASFERVGGEEERGSG---SGGGREDERGVDFGDSEIFLQKFRAAKRHFERTQIPATPRNRRREDCSNENLRRGGSAGECSAVTVGAEGISQAR-GLLTGLSVPPELVQAVLEGVFWCRVMLED-VSIREEKLSPTTRSQPHMQGCRDYTVLPVSPAMSPLPIEDPLPEDYSCITKPHSPTGQGADQELLASLLVEKSYTLFDSPFRDGNTGDHSPARADMLSRRDGSAFGSFSEVRIRLYELCLALQPDLA-ERPMIVGRRSSSMGQESNLGQKREIS--RNCRQERADES--PRFKEEGCGIGLPVEETSS----ALKSRAALRQREHIRNEGEEGTSTDSEGGGEEVVGGVDASIR------------SQGPAE----GGRNREVPTG-----DRQWVVNEMRCVGSNVKAVAVLCQVPPPLMLPTATLDVSSGGYMDMTRWKLLLSVLNLGDRDNCQLTALIMAE 2887
MG+RGLSSYVT CQR+CSEHV+L D D +S G V LAVDGLALVYH+M+N L LELG DY+ K ATT+ RRR+Q +AS +LM+ GE G+ F + SLLPLFA ETLAAAC +AGV+ R ADREADPELAAAC+ R D G VG E GGCDAVLSNDSDFLVMDIPGYIPFW+LG+G DGSAGALVFRR +AARLGIPAD +PDLACL+GNDWIQP + VH G I + D S +S ++ TS G +++RKG+ GG +G++SS A SAK LVEATAR+LS F + ++ G V A +P Q D+ G A + LC RFFP G P++ GKG K KR G+ R T GG+ + G G + G D G + D E FL++F AA+ H+E + A ++ ++ + L G A TV G+ +R GL G+ PPE+ QAVLEGVFWCR+MLED V++ + P DYT +P PTG + A+ S++ + F G + A ++ R F A Q D + +R M+V N Q +S C + S PR + + LP T+S A + + G + V GG D R + GP G R ++P G ++VV E R VG+ VK V+C+ P A+L +S+ + M RW L LS L L RDN LTAL+ +E
Sbjct: 1 MGVRGLSSYVTGCQRACSEHVDLNYGGSDRDTTSAADRDGPVS-LAVDGLALVYHIMQNAGVHDLRLELGWDYD-------------------------------KEATTLERRRSQAADASEVMVLMQPGGE---------GTDATFLQQHCSSLLPLFAVETLAAACISAGVSIRSADREADPELAAACQGNARSVDSGRRRHRCPALDDAGGGVGVE---GGCDAVLSNDSDFLVMDIPGYIPFWSLGVGADGSAGALVFRRTLVAARLGIPADWMPDLACLVGNDWIQPENHVHRRGQLYSDVGFIELPDHPPSFCLSPIGLVRVIMQSAATSAGCNSGHERKRKGTAAHNAGALASSSAPWRRGGNGNGSSSSNGLTGAASAKHLVEATARYLSEFLRHNKVPRDRCG--------------------------------------------------VNDAVSPSQVDPATGGDDRGRLLAGEADQSMTRELCARFFPALTAGRSGGVSXXXXXXXXXXXXXXXXXXXXXXXXXXGHRAPKQXXXXXXXXGKGHKNKRPSGNDRGGGSTTGCGSRGGQRDAGMGEEDAARGGIDAVGEEE-DGESFLREFLAARLHYEVPPLCAAGEDQAEDETLSHPLATTGLA-----ATVSGGGLVLSRVGLRAGIWAPPEIAQAVLEGVFWCRMMLEDSVALENAVIEPAA----------DYT-------------------------EPTRPTGTDSTPSGTAA-----SHSSAFASFSGVRKGIYEVCLAQLVGVRTAGCFS------------WAATQDDHSRDRSMVVATEGLLNDSAGNSAQSAVLSFRERCAAFASGGSAVPRREPQTTAASLPKASTASIQAPAXXXXXXXXXXXXXXXXAVAAAAAEPLGSRQIVAGGSDKQRRRGDKPRRFNGNDALGPRAAAVVGRRRHDLPPGRVTREGDEFVVREFRRVGTGVKTFRVVCKAP-------ASLRLSASTSLPM-RWNLCLSTLGLARRDNRLLTALMDSE 883
BLAST of mRNA_H-paniculata_contig55.12964.1 vs. uniprot
Match: A0A835Z4Q9_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q9_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.290e-16 Identity = 68/148 (45.95%), Postives = 86/148 (58.11%), Query Frame = 2
Query: 161 LAVDGLALVYHVM---KNTKDRRLYLELGCDYETLAAALLDYLSALTNAGITPVVIVDGMQDTEKSATTVLRRRAQVEEASILMERIGEIGVSECTASGSGPIFRYANRLSLLPLFAAETLAAACQAAGVAFRVADREADPELAAACR 595
LAVDG+AL YH++ ++ L L LG DY A + YL AL + +T V++DGMQ+ +K+ATT RRRAQV+EA + I GV+ A G+ +A R LLPLFA E LA AC A GV VA READ LA R
Sbjct: 281 LAVDGVALCYHMITIHSHSASPCLCLSLGGDYRAFTAHITRYLQALLSHDVTLHVVLDGMQEADKAATTRDRRRAQVQEARDTVRCIARCGVA---AEGAE---HWAAREKLLPLFATECLARACSALGVGCVVAAREADRRLALIAR 422
BLAST of mRNA_H-paniculata_contig55.12964.1 vs. uniprot
Match: A0A3P8ZEU5_ESOLU (Protein asteroid homolog 1-like n=2 Tax=Esox lucius TaxID=8010 RepID=A0A3P8ZEU5_ESOLU) HSP 1 Score: 65.5 bits (158), Expect = 7.560e-7 Identity = 79/295 (26.78%), Postives = 114/295 (38.64%), Query Frame = 2
Query: 32 MGIRGLSSYVTACQRSCSEHVELGILEDSDGSSQPQAGGVVQRLAVDGLALVYHVMKNTKDRRLYLELGCDYETLAAALLDYLSALTNAGITPVVIVDGMQDTEKSATTVLRRRAQVEEASILMERIGEIGVSECTASGSGPIFRYANRLSLLPLFAAETLAAACQAAGVAFRVADREADPELAAACRSYPRPSDENSVNGTKVLPVGRGSEVGDERWIGGCDAVLSNDSDFLVMDIPG-YIPF----WALGLGGDGSAGALVFRRHKLAARL----GIPADRLPDLACLIGNDW 889
MG+ GL+SYV R + V+ DS RL +DG +L + + N + + G DY+T AA L ++SAL + P V++DG D + LR+R Q +I +E + G S+LPL GV EAD E+A + P VL+NDSDF + D+PG YIPF WA +GG + RR+ ++ G+ + LP A L GND+
Sbjct: 1 MGVHGLTSYVEG-NRGFFQEVKF---RDS-------------RLVIDGSSLFFKLYLNNGLDQAH---GGDYDTFAALLSTFISALEACNVQPFVVLDGGMDPSDKKLSTLRQRMQ-----------SKIREAESLSRGQHG--------SVLPLLTRHVFIQVLSQRGVPLVQCPAEADWEIACLANQWACP-------------------------------VLTNDSDFYIFDLPGGYIPFQFFQWA-NVGGSSPNRYISARRYTVSGLCRHFGGMNRELLPLCAVLAGNDY 224 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig55.12964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig55.12964.1 >prot_H-paniculata_contig55.12964.1 ID=prot_H-paniculata_contig55.12964.1|Name=mRNA_H-paniculata_contig55.12964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1414bp MGIRGLSSYVTACQRSCSEHVELGILEDSDGSSQPQAGGVVQRLAVDGLAback to top mRNA from alignment at H-paniculata_contig55:18593..32777- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig55.12964.1 ID=mRNA_H-paniculata_contig55.12964.1|Name=mRNA_H-paniculata_contig55.12964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14185bp|location=Sequence derived from alignment at H-paniculata_contig55:18593..32777- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig55:18593..32777- >mRNA_H-paniculata_contig55.12964.1 ID=mRNA_H-paniculata_contig55.12964.1|Name=mRNA_H-paniculata_contig55.12964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=8484bp|location=Sequence derived from alignment at H-paniculata_contig55:18593..32777- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |