prot_H-paniculata_contig5495.12956.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5495.12956.1
Unique Nameprot_H-paniculata_contig5495.12956.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length72
Homology
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BLAST of mRNA_H-paniculata_contig5495.12956.1 vs. uniprot
Match: D8LQ40_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ40_ECTSI)

HSP 1 Score: 49.3 bits (116), Expect = 4.690e-5
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 0 
Query:   46 YEVDYGSMNVSPEILRMLGAPDDVIAA 72
            YEVDY SMNVSPEILRMLGA ++VIAA
Sbjct:   48 YEVDYASMNVSPEILRMLGASEEVIAA 74
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5495.12956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ40_ECTSI4.690e-585.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5495contigH-paniculata_contig5495:1992..6565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5495.12956.1mRNA_H-paniculata_contig5495.12956.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5495 1961..6565 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5495.12956.1 ID=prot_H-paniculata_contig5495.12956.1|Name=mRNA_H-paniculata_contig5495.12956.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp
MMVANKNENDERNRSTSSSGEDECSDDDSYDYGFADDEDGNGEEEYEVDY
GSMNVSPEILRMLGAPDDVIAA
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