prot_H-paniculata_contig5467.12925.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5467.12925.1
Unique Nameprot_H-paniculata_contig5467.12925.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length361
Homology
BLAST of mRNA_H-paniculata_contig5467.12925.1 vs. uniprot
Match: D7FLF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF3_ECTSI)

HSP 1 Score: 400 bits (1028), Expect = 6.900e-136
Identity = 221/374 (59.09%), Postives = 260/374 (69.52%), Query Frame = 0
Query:   10 ILAGAPCLCGFLPPV-LHGGLDRCTPKKRSCLAVPTRQHHAAETRLYVGDKIFGIEDEPEAEENXXXXXXXXXXXXXXXXXXXXXXXGEEDLEGMVVKPRRKRXXYSXX------------------------SDDYFEREDSQRKLAQEVARKFPDIGQVVVDRYGKIIGGVNPFEGTDIKLEDQP-NQEEEEDFPEVAGVIAGMDDPSDAPWRLEAEEIIRQEVTRCGLTCYDILWTFHKLEVTVTRGTGDGPDEDAGYVDSDKLMEAIRGVNAALEAREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFDIVVRTGGPFKNKRELQGKLLERTFDELKITQSGRTVRIPLALVDEVRLSPAMVEAGD 357
            ++A  PC+ GFL P+  H    + T   R      TR   A  TRLYVG KIFG EDEP                            G+  L    VK  RK  X  XX                        SDD   RE  +++LA+E+ARKFPDIG+V VD++G I+GGVNPFEGTD+KLEDQP   ++E+DFPEVAGVIAGMDDP+DAPWRLEAE+I+R +V  CGLTCYDILWTFH+LEVTVTR  GDGP E+A YVDSDKLM+AI+GVNAALEAREEELFVLGRHEL+VATPGAKD+LTTDK+FKA+KGF+++V+ GGPFK KREL+GKLLERTFDEL I ++GR VRIPLALVDEVRL PA+VEAGD
Sbjct:   10 VVAACPCVPGFLLPLPTHDVGQQGTLFARCAATRSTRGREATATRLYVGGKIFG-EDEP-----------------------TPPPQGQPGLIKPAVKSNRKEEXXXXXXXXXXXXXXXXXXXXXXXXXKYDFSDDLAAREQDEKRLAEELARKFPDIGRVKVDKFGNIVGGVNPFEGTDVKLEDQPIPDDDEKDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGD 359          
BLAST of mRNA_H-paniculata_contig5467.12925.1 vs. uniprot
Match: A0A836C944_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C944_9STRA)

HSP 1 Score: 279 bits (714), Expect = 3.040e-88
Identity = 148/239 (61.92%), Postives = 177/239 (74.06%), Query Frame = 0
Query:  123 EREDSQRKLAQEVARKFPDIGQVVVDRYGKIIGGVNPFEGTDIKLE-DQPNQEEEED-FPEVAGVIAGMDDPSDAPWRLEAEEIIRQEVTRCGLTCYDILWTFHKLEVTVTRGTGDGPDEDAGYVDSDKLMEAIRGVNAALEAREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFDIVVRTGGPFKNKRELQGKLLERTFDELKITQSGRTVRIPLALVDEVRLSPAMVEAGDVY 359
            E E  ++ +A EV +++PD   V+VD  G +IGGV+P+   +  LE  +PN   + D +PEVAG   GMDDP DAPWR EAEEIIR+EV   GL CYDI+W+FHKLEVTVTRG      E+AGYVDSD LM+AIR VN ALE  EE L+VLGRHELI+ATPGAKDILTTD+EFKAFKGFD+VV TG     +RE+ GKL ERTFDEL + Q GR VRIPLALVDEVRL  A +E G+ +
Sbjct:  133 EEELEEQAVAVEVLQQYPDAPIVLVDDMGNVIGGVDPYADEENGLERGEPNVVGQNDEWPEVAGDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGEQW 371          
BLAST of mRNA_H-paniculata_contig5467.12925.1 vs. uniprot
Match: A0A4D9D4Q5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Q5_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.890e-38
Identity = 83/197 (42.13%), Postives = 110/197 (55.84%), Query Frame = 0
Query:  170 QPNQEEEEDFPEVAGVIAGMDDPSDAPWRLEAEEIIRQEVTRCGLTCYDILWTFHKLEVTVTRGTGDGPDE------DAGYVDSDKLMEAIRGVNAALEAREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFDIVVRTGGPFKNKRELQ---GKLLERTFDELKITQSGRTVRIPLALVDEVRLSPAMVEAGD 357
            Q N+ + ++ PE  G   GMDDP DAPWRL+AEE+IR  VT  G   YD+ W  H + V +TR  G   +       DAG + SD+++E  R V  AL   +  L VL R  L V TPGAKD+LTT++EF+AF+G+++ V    P           G+LLER      +   G+ V IP  +V EVRL  AM EA D
Sbjct:  108 QENEPDWDNIPEYGGEFLGMDDPLDAPWRLQAEEVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDGGNVESEGEGVADAGSLSSDEIVEVTRAVEEALLPHDNHLRVLQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADD 304          
BLAST of mRNA_H-paniculata_contig5467.12925.1 vs. uniprot
Match: W7TJE5_9STRA (Ribosome maturation factor rimp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJE5_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.040e-36
Identity = 82/197 (41.62%), Postives = 110/197 (55.84%), Query Frame = 0
Query:  170 QPNQEEEEDFPEVAGVIAGMDDPSDAPWRLEAEEIIRQEVTRCGLTCYDILWTFHKLEVTVTR---GTGDGPDE---DAGYVDSDKLMEAIRGVNAALEAREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFDIVVRTGGPFKNKRELQ---GKLLERTFDELKITQSGRTVRIPLALVDEVRLSPAMVEAGD 357
            Q N+ + ++ PE  G   GMDDP DAPWRL AE++IR  VT  G   YD+ W  H + V +TR   G  +   E   DAG + SD+++E  R V  AL   +  L +L R  L V TPGAKD+LTT++EF+AF+G+++ V    P           G+LLER      +   G+ V IP  +V EVRL  AM EA D
Sbjct:  218 QENEPDWDNIPEYGGEFLGMDDPLDAPWRLHAEDVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDVGNVENEGEGVADAGSLSSDEIVEVTRAVEEALLPHDNHLRILQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADD 414          
BLAST of mRNA_H-paniculata_contig5467.12925.1 vs. uniprot
Match: A0A7S2SW06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW06_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.810e-33
Identity = 83/182 (45.60%), Postives = 112/182 (61.54%), Query Frame = 0
Query:  182 VAGVIAGMDDPSDAPWRLEAEEIIRQEVTR-CGLTCYDILWTFHKLEVTVTRGTGDGPDEDAGYVDSDKLMEAIRGVNAALEAREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFDIVVRTGGPFK-NKRE-LQGKLLERTFDELKITQSGRTVRIPLALVDEVRLSPAMVEAGDVYP 360
            V G++ G+DDP D  WRL+AEE++R  V    G+  YD+ W    L+V + + T +G     G VD   +  A R +  ALEA +EEL +L RHEL V++ GAK+IL +++EF+AFKGFD+VV+T  P   +KRE L GKL+ R   E  I   GR VRIP  LV+EVRL  A  E  +  P
Sbjct:  122 VYGIMNGLDDPRDVFWRLKAEELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEG-----GAVDLKVVETAHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEANEEPVENLP 298          
BLAST of mRNA_H-paniculata_contig5467.12925.1 vs. uniprot
Match: A0A7S2PI76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PI76_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.620e-26
Identity = 75/210 (35.71%), Postives = 104/210 (49.52%), Query Frame = 0
Query:  157 VNPFEGTDIKLEDQ-PNQEEEEDFPEVAGVIAGMDDPSDAPWRLEAEEIIRQEVTRCGLTCYDILWTFHKLEVTVTRGTGDGPD--------------------EDAGYVDSDKLMEAIRGV------NAALEAREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFDIVVRTGGPFKNKRELQGKLLERTFDELKITQSGRTVRIP 339
            ++P +  ++K ++Q PN       P   G   G DDP DAPWR+E E+IIR      G    D+ W      VT++  TG   D                    E    V  D +  +  GV       A  EA + +L VL RHE+IV +PG  ++L T ++F AFKGFD++V+T  P  + R L+GKLLERT  +  ITQ G+ V IP
Sbjct:   18 IDPEDVEELKYKEQAPNPA----VPWRRGDPDGCDDPMDAPWRIEGEQIIRDAAESVGAVVEDVTWGMAMCTVTISDTTGVKKDTSEYLEERKKRDDEYPWMREERDAVVTEDAVDMSGVGVVAGTIIEALQEAEDRDLDVLSRHEIIVTSPGVSNVLETQRQFDAFKGFDVIVQTIDPLGSNRRLEGKLLERTALDTFITQKGKKVTIP 223          
BLAST of mRNA_H-paniculata_contig5467.12925.1 vs. uniprot
Match: A0A7S1TZY1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY1_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.580e-25
Identity = 73/191 (38.22%), Postives = 106/191 (55.50%), Query Frame = 0
Query:  184 GVIAGMDDPSDAPWRLEA----EEIIRQEVTRCGLTCYDILWTFHKLEVTVTRGTGDGPDEDAGYVDSDKLMEAI-RGVNAALEAREEEL---FVLGRHELIVATPGAKDILTTDKEFKAFKGFDIVVRTGGPFKNK-------RELQGKLLERTFDELKITQSGRTVRIPLALVDEVRLSPAMVEAGDVY 359
            G   GMDDP DAPWRLEA    EE+++++         D+LW F  +++TVT      P EDA    S  ++E + R ++  L   E EL     L  H L V TPGA +++TT ++F+A+KGF + V T G  K+        + L G L  RT +E+ + Q GR V++P+A+V EVRL    +E GD +
Sbjct:   96 GPALGMDDPLDAPWRLEAAAEIEELVKEKYP--DAQAVDVLWAFSNVQITVT------PKEDANVPLSSAVIEMLTRAISDDLFPAEPELAHDHWLTMHALSVCTPGASNVITTQEQFEAYKGFQVDVVTLGMPKSDGFAGVPGKTLTGTLHGRTTEEVHLNQKGRIVKVPIAMVSEVRLPEPELENGDKW 278          
BLAST of mRNA_H-paniculata_contig5467.12925.1 vs. uniprot
Match: A0A7S2SV25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV25_9STRA)

HSP 1 Score: 109 bits (272), Expect = 7.320e-25
Identity = 71/162 (43.83%), Postives = 97/162 (59.88%), Query Frame = 0
Query:  202 EEIIRQEVTR-CGLTCYDILWTFHKLEVTVTRGTGDGPDEDAGYVDSDKLMEAIRGVNAALEAREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFDIVVRTGGPFK-NKRE-LQGKLLERTFDELKITQSGRTVRIPLALVDEVRLSPAMVEAGDVYP 360
            +E++R  V    G+  YD+ W    L+V + + T +G     G VD   +  A R +  ALEA +EEL +L RHEL V++ GAK+IL +++EF+AFKGFD+VV+T  P   +KRE L GKL+ R   E  I   GR VRIP  LV+EVRL  A  E  +  P
Sbjct:   12 QELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEG-----GAVDLKVVETAHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEANEEPVENLP 168          
BLAST of mRNA_H-paniculata_contig5467.12925.1 vs. uniprot
Match: A0A7S2D135_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D135_9STRA)

HSP 1 Score: 107 bits (266), Expect = 4.190e-23
Identity = 58/167 (34.73%), Postives = 95/167 (56.89%), Query Frame = 0
Query:  184 GVIAGMDDPSDAPWRLEAEEIIRQEVTRC-GLTCYDILWTFHKLEVTVTRGTGDGPDEDAGYVDSDKLMEAIRGVNAALEAREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFDIVVRTGGPFKNKRE-LQGKLLERTFDELKITQSGRTVRIPLALVDEVRL 348
            G + G+DDP D  WR+  +++IR+ +    G++ YDI W    L V +         E++G V  + +++  + +   LE  ++EL +L RH L V++ G  D+LT +++F  FKGF++ V T   F ++R  + G+L+ R   E  I Q GR V+IP   V+EVRL
Sbjct:  114 GDMNGLDDPRDVEWRIRGQDLIREAIAPLNGISVYDITWNIGDLTVFIEN-------EESG-VSMEDIIDCTKAIQDTLEPFDDELEILSRHTLEVSSKGIDDVLTAERQFITFKGFEVAVSTISTFSDRRAPILGRLVGRDVHETTINQKGRMVKIPNFYVEEVRL 272          
BLAST of mRNA_H-paniculata_contig5467.12925.1 vs. uniprot
Match: A0A7S1DE94_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DE94_CYCTE)

HSP 1 Score: 102 bits (254), Expect = 7.050e-23
Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 0
Query:  240 EDAGYVDSDKLMEAIRGVNAALEAREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFDIVVRTGGPFKNKRELQGKLLERTFDELKITQSGRTVRIPLALVDEVRLSPAMVEAG 356
            + A  VD+ K+    + +   L+++E  L +L RHELI+ATPGA D L T ++F A++GFD++V T  PF + R L GKL+ER   +L I + GR V IPL  V  VRL PA  E G
Sbjct:   13 DGAMVVDTSKISVIAKYILKGLDSQEHRLRILDRHELILATPGAPDTLETQRQFDAYRGFDVIVETVDPFNSNRVLTGKLVERNSMDLIIRKKGRMVTIPLNFVSSVRLPPAKREKG 129          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5467.12925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF3_ECTSI6.900e-13659.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C944_9STRA3.040e-8861.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D4Q5_9STRA1.890e-3842.13Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TJE5_9STRA5.040e-3641.62Ribosome maturation factor rimp n=1 Tax=Nannochlor... [more]
A0A7S2SW06_9STRA4.810e-3345.60Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2PI76_9STRA2.620e-2635.71Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S1TZY1_9STRA1.580e-2538.22Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SV25_9STRA7.320e-2543.83Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2D135_9STRA4.190e-2334.73Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S1DE94_CYCTE7.050e-2345.30Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..360
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.742
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR036847Ribosome maturation factor RimP, C-terminal domain superfamilySUPERFAMILY74942YhbC-like, C-terminal domaincoord: 287..350

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5467contigH-paniculata_contig5467:8001..12779 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5467.12925.1mRNA_H-paniculata_contig5467.12925.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5467 7902..13199 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5467.12925.1 ID=prot_H-paniculata_contig5467.12925.1|Name=mRNA_H-paniculata_contig5467.12925.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=361bp
MFYMLKVVVILAGAPCLCGFLPPVLHGGLDRCTPKKRSCLAVPTRQHHAA
ETRLYVGDKIFGIEDEPEAEENEEEETEATVGEEEDDGEGDEDEDGEEDL
EGMVVKPRRKRRKYSSSSDDYFEREDSQRKLAQEVARKFPDIGQVVVDRY
GKIIGGVNPFEGTDIKLEDQPNQEEEEDFPEVAGVIAGMDDPSDAPWRLE
AEEIIRQEVTRCGLTCYDILWTFHKLEVTVTRGTGDGPDEDAGYVDSDKL
MEAIRGVNAALEAREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFD
IVVRTGGPFKNKRELQGKLLERTFDELKITQSGRTVRIPLALVDEVRLSP
AMVEAGDVYP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036847RimP_C_sf