prot_H-paniculata_contig5467.12924.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5467.12924.1
Unique Nameprot_H-paniculata_contig5467.12924.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length162
Homology
BLAST of mRNA_H-paniculata_contig5467.12924.1 vs. uniprot
Match: D7FLF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF4_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 4.980e-52
Identity = 81/131 (61.83%), Postives = 103/131 (78.63%), Query Frame = 0
Query:   31 IPGNLLPTCATSGGHQHENEKHQPDDVGYDASYNVDRRNMVQAIADLYQAELKRQEEMSLEDAIRSDNGPKEISIYCHQAPEVKIVDLAQDHRGNNECLILHVNAPDVSSKLMLKCDGSVSGSDFGWGENW 161
            IPG     CA++ G     E        YD+ Y+V RRNM++AIADLY+ E++RQE+MS+EDAI  DNGPKEISI+ H+ PEVKIVDLAQDHR NN+CL+L++N+PDVSSK++LKCDGS+SG DFGWGE+W
Sbjct:   36 IPGEKPFGCASTAGQTSGKEGE------YDSGYDVSRRNMIKAIADLYKEEMRRQEDMSMEDAILCDNGPKEISIFFHENPEVKIVDLAQDHRNNNDCLVLNINSPDVSSKVVLKCDGSISGDDFGWGEDW 160          
BLAST of mRNA_H-paniculata_contig5467.12924.1 vs. uniprot
Match: A0A7S1CH73_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CH73_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.020e-18
Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = 0
Query:   65 VDRRNMVQAIADLYQAELKRQEEMSLEDAIRSDNGPKEISIYCHQAPEVKIVDLAQDHRGNNECLILHVNAPDVSSKLMLKCDGSVSGSD 154
             + R+M +A+  LY+ E  RQ  +   DA  +DNGPKEIS++C +  ++ I DL  D R NNEC++L++N P VSS+L+L CDG+ S  D
Sbjct:   96 AETRDMPEAVRKLYEREKARQRRIQHSDADSADNGPKEISMFCPKDMQIAIADLNDDERDNNECMVLNLNGPGVSSRLVLFCDGTHSDFD 185          
BLAST of mRNA_H-paniculata_contig5467.12924.1 vs. uniprot
Match: A0A7S2R3B7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R3B7_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.190e-15
Identity = 35/82 (42.68%), Postives = 55/82 (67.07%), Query Frame = 0
Query:   70 MVQAIADLYQAELKRQEEMSLEDAIRSDNGPKEISIYCHQAPEVKIVDLAQDHRGNNECLILHVNAPDVSSKLMLKCDGSVS 151
            M + I D+++ E  RQE++  + A+  D GPKEISI+C QAP+VKI DL +     NEC +L +N+P++ S+L + C+G  +
Sbjct:   28 MRRRIDDMFEEERLRQEQVDPDLAMEEDLGPKEISIFCPQAPDVKISDLPRHAVEENECFVLQINSPELHSRLSINCNGEFT 109          
BLAST of mRNA_H-paniculata_contig5467.12924.1 vs. uniprot
Match: UPI000711E855 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711E855)

HSP 1 Score: 74.3 bits (181), Expect = 3.130e-14
Identity = 31/71 (43.66%), Postives = 53/71 (74.65%), Query Frame = 0
Query:   81 ELKRQEEMSLEDAIRSDNGPKEISIYCHQAPEVKIVDLAQDHRGNNECLILHVNAPDVSSKLMLKCDGSVS 151
            E +RQ+++  E+A  ++NGPK+IS++C   P+V+IVDL ++  G N CL L + +P++ ++L+L CDGSV+
Sbjct:   43 EYERQKQLMTEEAEEANNGPKDISLFCSSNPQVRIVDLDKNLIGKNICLQLQIGSPELQTRLLLYCDGSVN 113          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5467.12924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FLF4_ECTSI4.980e-5261.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1CH73_9STRA1.020e-1845.56Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2R3B7_9STRA4.190e-1542.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
UPI000711E8553.130e-1443.66hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..161
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..25
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5467contigH-paniculata_contig5467:779..4632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5467.12924.1mRNA_H-paniculata_contig5467.12924.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5467 598..6537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5467.12924.1 ID=prot_H-paniculata_contig5467.12924.1|Name=mRNA_H-paniculata_contig5467.12924.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp
MKNGVKWRPARSVSRNFTLASVAAVAVAFGIPGNLLPTCATSGGHQHENE
KHQPDDVGYDASYNVDRRNMVQAIADLYQAELKRQEEMSLEDAIRSDNGP
KEISIYCHQAPEVKIVDLAQDHRGNNECLILHVNAPDVSSKLMLKCDGSV
SGSDFGWGENW*
back to top