mRNA_H-paniculata_contig54655.12923.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig54655.12923.1
Unique NamemRNA_H-paniculata_contig54655.12923.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig54655.12923.1 vs. uniprot
Match: A0A8J6L8N4_TENMO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L8N4_TENMO)

HSP 1 Score: 239 bits (611), Expect = 1.340e-67
Identity = 129/345 (37.39%), Postives = 210/345 (60.87%), Query Frame = 1
Query:   25 GNLTEAVSKGEPKSAAEELKGPEAEKWRAAMDGKWGALVENGTWESEDPGRLPAGRKVICTKWIFKRKLKEDGSVARYKARLVAQGVSQVDGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLDASVGEELFVKLPLEVSPFSQDIPFVRR---LRKSLYGLKQSGRNWNNTLDDCLVGIGLDHSTTDSCLYF--SRDDWRETNLLVAVYVDDLVLAGRR-EKVDEFEHNISQCFRMKDLGSLSRVLGIELRRDCPNGAITTSQGSCIRGVLKRYGFDECRGVPTPVEGKVKISAP-------EGRSGNSIEYRGMVGSPMYVSTGTRPDIAYAVH 1020
            G+ T  +++ +PK+  E     E+E+WR AM  ++ +L +N TWE  D    P+ RKVI  KW+ K KL  DG++AR KARLVA+G +Q+ G DF ET APV+R+ ++R + ++AA+++  +  +D   AYL+  + EE++++LP  ++   +++ F  +   L+K+LYGLKQSGR W   LD+ L  + L   +TD C+Y   +R    E  +L+AVYVDD+++A    E+++  + N+++ F+MKD+G +   LGIE   +     +T SQ   +  +LKR+G +  + V TP++  VK+S         E        Y+ ++GS MY+S  TRPDI+YAV+
Sbjct:  102 GSRTNEITEEDPKTIKEAFLRQESEEWREAMKNEFNSLKKNKTWEIVD---RPSDRKVIGCKWVLKTKLNSDGTIARRKARLVAKGYAQLPGIDFQETFAPVSRLCSVRLIMAIAAQYNLIVHQLDFVTAYLNGDIDEEIYMELPEGINEIGEEVVFKNKVCLLKKALYGLKQSGRQWYKKLDENLQKLNLRPLSTDKCIYMRKTRRGNEENMVLIAVYVDDIIIASNSMEEINNLKENLAKIFQMKDMGQIKYYLGIEF--NVKKNKVTMSQKKYVDDLLKRFGMENSKEVSTPMDPNVKLSKEMCPKTEKEKEEMTRCPYQNLIGSLMYLSVSTRPDISYAVN 441          
BLAST of mRNA_H-paniculata_contig54655.12923.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 235 bits (599), Expect = 7.560e-66
Identity = 133/328 (40.55%), Postives = 190/328 (57.93%), Query Frame = 1
Query:   58 PKSAAEELKGPEAEKWRAAMDGKWGALVENGTWESEDPGRLPAGRKVICTKWIFKRKLKEDGSVARYKARLVAQGVSQVDGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLDASVGEELFVKLPLEVSPFSQDIPFVRRLRKSLYGLKQSGRNWNNTLDDCLVGIGLDHSTTDSCLYFSRDDWRETNLLVAVYVDDLVLAGRR-EKVDEFEHNISQCFRMKDLGSLSRVLGIELRRDCPNGAITTSQGSCIRGVLKRYGFDECRGVPTPVEGKVKISAPEGRSGNSIE-------YRGMVGSPMYVSTGTRPDIAYAV 1017
            P+S AE    PE  +W+ AMD +   + E GT+  ED   LPAGR  I  KW+F +K  EDG+++RYKARLVAQG SQ+ G D+ ET APV R+ ++R    +AA  D E+  MDV  AYL+  + EE++++ P     +      V RLRK+LYGLKQSGR WN   D  L  IG      D C+Y    + R T  ++ V+VDDL++     E + E +  +   F +KDLG   +++GIE++RD  NG I+ SQ   I GVL R+G    R V TP++  V +     R+ + +        Y+ ++GS +Y + GTRPDI++AV
Sbjct:  879 PRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQP---EGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT--IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNVILKK---RTDDLVADPAMVGGYQSVIGSLLYAARGTRPDISHAV 1195          
BLAST of mRNA_H-paniculata_contig54655.12923.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 227 bits (578), Expect = 2.920e-65
Identity = 123/325 (37.85%), Postives = 198/325 (60.92%), Query Frame = 1
Query:   55 EPKSAAEELKGPEAEKWRAAMDGKWGALVENGTWESEDPGRLPAGRKVICTKWIFKRKLKEDGSVARYKARLVAQGVSQVDGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLDASVGEELFVKLPLEVSPFSQDIPFVRRLRKSLYGLKQSGRNWNNTLDDCLVGIGLDHSTTDSCLYFSRDDWRETNLLVAVYVDDLVLAGRR-EKVDEFEHNISQCFRMKDLGSLSRVLGIELRRDCPNGAITTSQGSCIRGVLKRYGFDECRGVPTPVE--GKVKISAPEGRSGNSIEYRGMVGSPMYVSTGTRPDIAYAVH 1020
            EP + +E L GP AE+W  AM  +  +L E+  WE  +   LP  RK +  KW+FK K   DGS+ R+KARLVAQG SQ  G D+ ET +PV R  ++RTV +L+ +   +L  MDV AA+L+  + +E+++K P       ++     +L KSLYGLKQS R WN+ LD+ L  IG   + +D C+Y   +D      +VA++VDD++LAG+  EK+ + + +I++ F++KD+G L  +LG+++ ++  +  +   Q +    ++K+YG + C+ V TPV+   K+  +  +    N  E++  VGS +Y+S+ TRPDI +AV+
Sbjct:  145 EPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVN 461          
BLAST of mRNA_H-paniculata_contig54655.12923.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME)

HSP 1 Score: 228 bits (581), Expect = 4.510e-65
Identity = 126/330 (38.18%), Postives = 193/330 (58.48%), Query Frame = 1
Query:   55 EPKSAAEELKGPEAEKWRAAMDGKWGALVENGTWESEDPGRLPAGRKVICTKWIFKRKLKEDGSVARYKARLVAQGVSQVDGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLDASVGEELFVKLPLEVSPFSQDIPFVRRLRKSLYGLKQSGRNWNNTLDDCLVGIGLDHSTTDSCLYFSRDDWRETNLLVAVYVDD-LVLAGRREKVDEFEHNISQCFRMKDLGSLSRVLGIELRRDCPNGAITTSQGSCIRGVLKRYGFDECRGVPTPVEGKVKI-------SAPEGRSGNSIEYRGMVGSPMYVSTGTRPDIAYAVH 1020
            +P +  E L  PEA+ W+ AM  +  +   N TW      +LP G++ I TKW+FK K   +G++ RYKARLV +G SQ  G D+ ET +PV R ++LR +F++AA+HD  +  +D   A+L+  + EE+F+K P     +S +   V RL KSLYGLKQ+ + WN+ L++ L+ +GL  S  D C+YF   ++  + + VA+YVDD LV +  ++     ++ +S   +MKD+GS S VLG+ ++RD     I   Q   I  VLKR+G D+C  V TP++   K+       S  E +    + Y   VGS +Y +  TRPDI++AV+
Sbjct:  232 DPVNLEEALNSPEADDWKRAMKEEIESHKTNRTWVLT---KLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQP---EGYSDNSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSEY--SMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKVPYMEAVGSLLYAAQNTRPDISFAVN 553          
BLAST of mRNA_H-paniculata_contig54655.12923.1 vs. uniprot
Match: C6JRI2_SORBI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sorghum bicolor TaxID=4558 RepID=C6JRI2_SORBI)

HSP 1 Score: 225 bits (574), Expect = 2.210e-64
Identity = 119/323 (36.84%), Postives = 191/323 (59.13%), Query Frame = 1
Query:   58 PKSAAEELKGPEAEKWRAAMDGKWGALVENGTWESEDPGRLPAGRKVICTKWIFKRKLKEDGSVARYKARLVAQGVSQVDGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLDASVGEELFVKLPLEVSPFSQDIPFVRRLRKSLYGLKQSGRNWNNTLDDCLVGIGLDHSTTDSCLY--FSRDDWRETNLLVAVYVDDLVLAGRREKV-DEFEHNISQCFRMKDLGSLSRVLGIELRRDCPNGAITTSQGSCIRGVLKRYGFDECRGVPTPVEGKVKISAPEGRSGNSIEYRGMVGSPMYVSTGTRPDIAYAV 1017
            P + +E     +++ W+ A+  +  +++ NGTWE  D    P G K +  KW+FK+KL+ DG++ +YKARLVA+G +Q +GED+F+T +PVAR++T+R + SLAA H F +  MDV  A+L+  + EE+++  P       Q+   V +L KSLYGLKQ+ + W+   D  L   G   +  D C+Y  F   D     +++ +YVDD+++ G   KV  E +  +S  F MKDLG    ++ I+L R+  NG +T  Q   +  VL R+G+ EC   PTP +  V++      + + + Y  ++GS MY+++ TRPDI++AV
Sbjct:  186 PTTISEAYSSSDSDMWKEAVQSEMDSIMSNGTWEVVD---RPFGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDYFDTYSPVARLTTIRVLLSLAASHGFLIHQMDVKTAFLNGELEEEIYMDQPDGFIANGQEGK-VCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRFGGGD----GVILCLYVDDILIFGNNLKVIKEVKEFLSNNFEMKDLGEADVIVNIKLSREEGNGWVTLMQSHYVEKVLNRFGYSECTPAPTPYDPSVRLRKNHRIARDQLRYSQIIGSLMYLASATRPDISFAV 500          
BLAST of mRNA_H-paniculata_contig54655.12923.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA)

HSP 1 Score: 229 bits (585), Expect = 5.440e-64
Identity = 124/324 (38.27%), Postives = 198/324 (61.11%), Query Frame = 1
Query:   58 PKSAAEELKGPEAEKWRAAMDGKWGALVENGTWESEDPGRLPAGRKVICTKWIFKRKLKEDGSVARYKARLVAQGVSQVDGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLDASVGEELFVKLPLEVSPFSQDIPF-VRRLRKSLYGLKQSGRNWNNTLDDCLVGIGLDHSTTDSCLYFSRDDWRETNLLVAVYVDDLVLAGRRE-KVDEFEHNISQCFRMKDLGSLSRVLGIELRRDCPNGAITTSQGSCIRGVLKRYGFDECRGVPTPVEGKVKISAPEGR--SGNSIEYRGMVGSPMYVSTGTRPDIAYAV 1017
            P++  E L+G  A+ W+ +M  ++ AL+ N TW   D   LPAG K I +KW+F+ K  ++G + R+K+RLVA+G  Q  G +++ET +PV R  T+R +F++AAE    +  +D+  AYL++S+ EE++++ P      S + P  V +L+K++YGLKQSGR WNNTLD+ L  +G   S  ++CLY  +   ++ +  +AVYVDDL++    E ++   +  IS  F M D GSLS  LG+E++RD   G ++  Q + IR +LK YG   CR V TP++    +   +      N  +Y+ ++GS MY++  +RPDI +AV
Sbjct:  818 PQTVTEALQGEYAQNWQESMRSEYNALLSNDTWSLVD---LPAGAKTIGSKWVFRIKRDKNGEIERFKSRLVAKGCGQQFGVNYWETFSPVIRYETIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNF--ISTEHPNKVLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQ--QQGSSYIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDSCVKVNVTQYQSLIGSLMYLAILSRPDILHAV 1134          
BLAST of mRNA_H-paniculata_contig54655.12923.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 218 bits (554), Expect = 8.020e-64
Identity = 122/321 (38.01%), Postives = 185/321 (57.63%), Query Frame = 1
Query:   79 LKGPEAEKWRAAMDGKWGALVENGTWESEDPGRLPAGRKVICTKWIFKRKLKEDGSVARYKARLVAQGVSQVDGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLDASVGEELFVKLPLEVSPFSQDIPFVRRLRKSLYGLKQSGRNWNNTLDDCLVGIGLDHSTTDSCLYFSRDDWRETNLLVAVYVDDLVLA-GRREKVDEFEHNISQCFRMKDLGSLSRVLGIELRRDCPNGAITTSQGSCIRGVLKRYGFDECRGVPTPVEGKVKISAPEGRSG-------NSIEYRGMVGSPMYVSTGTRPDIAYAV 1017
            ++  +A KW+ A + ++ +L +N TWE      LP GRK I +KW+FK K   +G + RYKARLVA+G  Q  G DF ET APVA+ +++R + S+AA++   L  MDV  A+L+  + EE+++K P            V +L+++LYGLKQS R WN T+D+ +  IG     TD C+Y  RDD  +  + V +YVDDL+LA    + +   +  +S+ F M DLG L   LG+E+ RD  +G ++  Q   +  VL ++G  +C+ V TP +  +K++      G         + YR  VG+ MY+  GTRPD+A AV
Sbjct:    1 MESSDASKWKEACESEFESLCKNKTWELVP---LPRGRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFVDAKYP-DHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDD--KAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAV 315          
BLAST of mRNA_H-paniculata_contig54655.12923.1 vs. uniprot
Match: A0A034VP70_BACDO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034VP70_BACDO)

HSP 1 Score: 228 bits (581), Expect = 1.270e-63
Identity = 126/330 (38.18%), Postives = 193/330 (58.48%), Query Frame = 1
Query:   55 EPKSAAEELKGPEAEKWRAAMDGKWGALVENGTWESEDPGRLPAGRKVICTKWIFKRKLKEDGSVARYKARLVAQGVSQVDGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLDASVGEELFVKLPLEVSPFSQDIPFVRRLRKSLYGLKQSGRNWNNTLDDCLVGIGLDHSTTDSCLYFSRDDWRETNLLVAVYVDD-LVLAGRREKVDEFEHNISQCFRMKDLGSLSRVLGIELRRDCPNGAITTSQGSCIRGVLKRYGFDECRGVPTPVEGKVKI-------SAPEGRSGNSIEYRGMVGSPMYVSTGTRPDIAYAVH 1020
            +P +  E L  PEA+ W+ AM  +  +   N TW      +LP G++ I TKW+FK K   +G++ RYKARLV +G SQ  G D+ ET +PV R ++LR +F++AA+HD  +  +D   A+L+  + EE+F+K P     +S +   V RL KSLYGLKQ+ + WN+ L++ L+ +GL  S  D C+YF   ++  + + VA+YVDD LV +  ++     ++ +S   +MKD+GS S VLG+ ++RD     I   Q   I  VLKR+G D+C  V TP++   K+       S  E +    + Y   VGS +Y +  TRPDI++AV+
Sbjct:  751 DPVNLEEALNSPEADDWKRAMKEEIESHKTNRTWVLT---KLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQP---EGYSDNSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSEY--SMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKVPYMEAVGSLLYAAQNTRPDISFAVN 1072          
BLAST of mRNA_H-paniculata_contig54655.12923.1 vs. uniprot
Match: A0A0V1GS48_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Trichinella TaxID=6333 RepID=A0A0V1GS48_9BILA)

HSP 1 Score: 228 bits (580), Expect = 2.650e-63
Identity = 131/345 (37.97%), Postives = 204/345 (59.13%), Query Frame = 1
Query:   28 NLTEAVSKGEPKSAAEELKGPEAEKWRAAMDGKWGALVENGTWESEDPGRLPAGRKVICTKWIFKRKLKEDGSVARYKARLVAQGVSQVDGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLDASVGEELFVKLP------LEVSPFSQDIPF-VRRLRKSLYGLKQSGRNWNNTLDDCLVGIGLDHSTTDSCLYFSRDDWRETNLLVAVYVDDLVLAGRRE-KVDEFEHNISQCFRMKDLGSLSRVLGIELRRDCPNGAITTSQGSCIRGVLKRYGFDECRGVPTPVEGKVKISAP-------EGRSGNSIEYRGMVGSPMYVSTGTRPDIAYAV 1017
            N+       +PKS  E L   E+++W  AM  ++ ALV+N TWE  +    P  +KVI  +W++  K+  DGS+ + KARLVA+G  Q    DF ET APVAR+S++RT+ +++A +   +  +D  +AYL+  + EE+++++P      L+ S   Q++   V R+RK+LYGLKQSGR W   LD+ L+  GL  ++ D C+YF R     T  + A+YVDD+++A     +++E +  +S+ F MKD+G +   LGIE+++   NG I  SQ   I  +L+R+G    + V TP++   K+SA        E     ++ YR +VGS MY+S  TRPDIA+AV
Sbjct:  858 NVASIAVMNDPKSVVEALSCHESKEWLEAMKREYEALVKNNTWEIVN---RPQRQKVITCQWVYNTKVNADGSIKQRKARLVAKGFLQRPNIDFHETYAPVARLSSIRTILAISANYGLTVHQLDFVSAYLNGEIEEEIYMEIPEKLDEVLKCSKMKQNLDGKVCRIRKALYGLKQSGRQWYKKLDEKLLQYGLKATSGDPCVYFERRGRELT--IAAIYVDDVIIASNNTARMNELKKTLSKSFEMKDMGPIHYCLGIEIKQSA-NGDIEMSQQKYIMDILERFGMRNSKPVGTPIDASNKLSAETCPKTEAEKAEMQNMPYRSLVGSLMYLSVSTRPDIAFAV 1196          
BLAST of mRNA_H-paniculata_contig54655.12923.1 vs. uniprot
Match: A0A6S7IKL3_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IKL3_PARCT)

HSP 1 Score: 224 bits (572), Expect = 3.270e-63
Identity = 126/326 (38.65%), Postives = 196/326 (60.12%), Query Frame = 1
Query:   49 KGEPKSAAEELKGPEAEKWRAAMDGKWGALVENGTWESEDPGRLPAGRKVICTKWIFKRKLKEDGSVARYKARLVAQGVSQVDGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLDASVGEELFVKLPLEVSPFSQDIPFVRRLRKSLYGLKQSGRNWNNTLDDCLVGIGLDHSTTDSCLYFSRDDWRETNLLVAVYVDDLVLAGRRE-KVDEFEHNISQCFRMKDLGSLSRVLGIELRRDCPNGAITTSQGSCIRGVLKRYGFDECRGVPTPVEG--KVKISAPEGRSGNSIEYRGMVGSPMYVSTGTRPDIAYAV 1017
            K EP++  E L  P+  KW  AM+ +  +L  N  W   +   LP  RK + +KW+F+ K   DG+V  +KARLVAQG SQ  G+D+ ET +PVAR  ++RTV +LAA+H  +L  MDV  A+L+  + EE+++K P       ++   V RLR+S+YGLK+S R WN+ LD  L  +G   +T D C+Y   +       ++AVYVDD++LAG+ + K++E +  +++ F+MKD+G L   LG+++ +   +  I   Q +  + VL+R+G +  +   TPV    K+K  A + +  + + Y+  VG  +Y+ST TRPDIAYAV
Sbjct:  509 KNEPRTVKEALSSPQKAKWVKAMEKEMESLKTNEVWNLVE---LPENRKAVGSKWVFRIKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIEKGKE-HLVCRLRRSIYGLKKSPRCWNSVLDRKLKNMGFVQTTGDPCIYVKEEGGEI--FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKEADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAV 828          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig54655.12923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J6L8N4_TENMO1.340e-6737.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A284QR88_ARMOS7.560e-6640.55Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A7D9HZ03_PARCT2.920e-6537.85Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C9RAA9_9HYME4.510e-6538.18POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus ... [more]
C6JRI2_SORBI2.210e-6436.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
W8BWJ0_CERCA5.440e-6438.27Retrovirus-related Pol polyprotein from transposon... [more]
A0A5D6YB57_9STRA8.020e-6438.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A034VP70_BACDO1.270e-6338.18Retrovirus-related Pol polyprotein from transposon... [more]
A0A0V1GS48_9BILA2.650e-6337.97Retrovirus-related Pol polyprotein from transposon... [more]
A0A6S7IKL3_PARCT3.270e-6338.65Retrovirus-related Pol poly from transposon TNT 1-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig54655contigH-paniculata_contig54655:34..1134 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score227.3
Seed ortholog evalue1.1e-56
Seed eggNOG ortholog4558.Sb0010s005460.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs37YYP@33090,3GQD7@35493,3IKKZ@38820,3M3FD@4447,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Exons2
Model size1020
Cds size1020
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930566.413798-CDS-H-paniculata_contig54655:33..9561622930566.413798-CDS-H-paniculata_contig54655:33..956Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig54655 34..956 +
1691481351.176276-CDS-H-paniculata_contig54655:33..9561691481351.176276-CDS-H-paniculata_contig54655:33..956Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig54655 34..956 +
1622930566.4304874-CDS-H-paniculata_contig54655:1037..11341622930566.4304874-CDS-H-paniculata_contig54655:1037..1134Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig54655 1038..1134 +
1691481351.18615-CDS-H-paniculata_contig54655:1037..11341691481351.18615-CDS-H-paniculata_contig54655:1037..1134Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig54655 1038..1134 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig54655.12923.1prot_H-paniculata_contig54655.12923.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig54655 34..1134 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig54655.12923.1

>prot_H-paniculata_contig54655.12923.1 ID=prot_H-paniculata_contig54655.12923.1|Name=mRNA_H-paniculata_contig54655.12923.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=340bp
RVAKVKGTGNLTEAVSKGEPKSAAEELKGPEAEKWRAAMDGKWGALVENG
TWESEDPGRLPAGRKVICTKWIFKRKLKEDGSVARYKARLVAQGVSQVDG
EDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAYLDASVGEELFV
KLPLEVSPFSQDIPFVRRLRKSLYGLKQSGRNWNNTLDDCLVGIGLDHST
TDSCLYFSRDDWRETNLLVAVYVDDLVLAGRREKVDEFEHNISQCFRMKD
LGSLSRVLGIELRRDCPNGAITTSQGSCIRGVLKRYGFDECRGVPTPVEG
KVKISAPEGRSGNSIEYRGMVGSPMYVSTGTRPDIAYAVH
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mRNA from alignment at H-paniculata_contig54655:34..1134+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig54655.12923.1 ID=mRNA_H-paniculata_contig54655.12923.1|Name=mRNA_H-paniculata_contig54655.12923.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1101bp|location=Sequence derived from alignment at H-paniculata_contig54655:34..1134+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGAGTGGCAAAAGTGAAAGGCACTGGCAACCTTACAGAGGCGGTATCTAA GGGGGAGCCGAAATCCGCAGCAGAAGAATTAAAGGGTCCAGAGGCGGAAA AGTGGCGCGCGGCAATGGACGGAAAATGGGGGGCGTTGGTGGAGAATGGG ACATGGGAAAGTGAAGACCCGGGGAGGTTACCCGCAGGGCGGAAGGTGAT TTGTACGAAATGGATTTTCAAGCGGAAACTGAAGGAGGATGGCAGCGTGG CACGCTACAAAGCGCGGCTGGTGGCTCAAGGAGTTTCACAGGTGGACGGT GAAGATTTCTTTGAAACCAGTGCCCCCGTAGCTCGCATGTCGACGTTACG TACTGTTTTTAGCCTGGCCGCCGAACATGATTTCGAATTAGAAGGCATGG ACGTAGATGCGGCGTATTTGGACGCCTCGGTGGGAGAAGAGCTGTTTGTT AAGCTACCCCTCGAGGTTTCCCCTTTCTCCCAAGACATACCGTTTGTGCG CCGCCTGCGTAAAAGCCTGTACGGCCTCAAGCAGAGCGGCCGAAACTGGA ACAACACTCTTGACGATTGTCTTGTTGGGATAGGACTCGACCATTCCACT ACCGACTCATGCTTGTACTTTTCCCGCGACGATTGGAGAGAGACAAACCT TCTGGTGGCCGTGTATGTTGACGACCTGGTCCTTGCTGGCCGTCGTGAGA AAGTAGATGAGTTCGAACATAACATAAGTCAGTGTTTTAGGATGAAAGAC TTGGGATCTCTCTCGCGCGTGTTGGGAATAGAACTACGACGTGACTGCCC TAATGGTGCCATAACCACCTCGCAGGGTAGCTGCATTCGCGGGGTACTAA AAAGATACGGTTTTGACGAGTGTCGAGGGGTACCCACCCCTGTAGAGGGA AAAGTGAAGATTTCGGCACCCGAGTCGACCGACAAGCCCTCCGAACCGAA GTCACTTGGAGCTGTACTGTCGGGCATAGGCACAGGAGTACAAGAAAGCG GCAGAGGGAGAAGTGGCAATTCAATTGAGTACAGAGGCATGGTAGGATCA CCCATGTACGTCTCGACAGGAACTAGACCTGATATAGCATACGCGGTACA C
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Coding sequence (CDS) from alignment at H-paniculata_contig54655:34..1134+

>mRNA_H-paniculata_contig54655.12923.1 ID=mRNA_H-paniculata_contig54655.12923.1|Name=mRNA_H-paniculata_contig54655.12923.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2040bp|location=Sequence derived from alignment at H-paniculata_contig54655:34..1134+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGAGTGGCAAAAGTGAAAGGCACTGGCAACCTTACAGAGGCGGTATCTAA
GGGGGAGCCGAAATCCGCAGCAGAAGAATTAAAGGGTCCAGAGGCGGAAA
AGTGGCGCGCGGCAATGGACGGAAAATGGGGGGCGTTGGTGGAGAATGGG
ACATGGGAAAGTGAAGACCCGGGGAGGTTACCCGCAGGGCGGAAGGTGAT
TTGTACGAAATGGATTTTCAAGCGGAAACTGAAGGAGGATGGCAGCGTGG
CACGCTACAAAGCGCGGCTGGTGGCTCAAGGAGTTTCACAGGTGGACGGT
GAAGATTTCTTTGAAACCAGTGCCCCCGTAGCTCGCATGTCGACGTTACG
TACTGTTTTTAGCCTGGCCGCCGAACATGATTTCGAATTAGAAGGCATGG
ACGTAGATGCGGCGTATTTGGACGCCTCGGTGGGAGAAGAGCTGTTTGTT
AAGCTACCCCTCGAGGTTTCCCCTTTCTCCCAAGACATACCGTTTGTGCG
CCGCCTGCGTAAAAGCCTGTACGGCCTCAAGCAGAGCGGCCGAAACTGGA
ACAACACTCTTGACGATTGTCTTGTTGGGATAGGACTCGACCATTCCACT
ACCGACTCATGCTTGTACTTTTCCCGCGACGATTGGAGAGAGACAAACCT
TCTGGTGGCCGTGTATGTTGACGACCTGGTCCTTGCTGGCCGTCGTGAGA
AAGTAGATGAGTTCGAACATAACATAAGTCAGTGTTTTAGGATGAAAGAC
TTGGGATCTCTCTCGCGCGTGTTGGGAATAGAACTACGACGTGACTGCCC
TAATGGTGCCATAACCACCTCGCAGGGTAGCTGCATTCGCGGGGTACTAA
AAAGATACGGTTTTGACGAGTGTCGAGGGGTACCCACCCCTGTAGAGGGA
AAAGTGAAGATTTCGGCACCCGACGAGTGGCAAAAGTGAAAGGCACTGGC
AACCTTACAGAGGCGGTATCTAAGGGGGAGCCGAAATCCGCAGCAGAAGA
ATTAAAGGGTCCAGAGGCGGAAAAGTGGCGCGCGGCAATGGACGGAAAAT
GGGGGGCGTTGGTGGAGAATGGGACATGGGAAAGTGAAGACCCGGGGAGG
TTACCCGCAGGGCGGAAGGTGATTTGTACGAAATGGATTTTCAAGCGGAA
ACTGAAGGAGGATGGCAGCGTGGCACGCTACAAAGCGCGGCTGGTGGCTC
AAGGAGTTTCACAGGTGGACGGTGAAGATTTCTTTGAAACCAGTGCCCCC
GTAGCTCGCATGTCGACGTTACGTACTGTTTTTAGCCTGGCCGCCGAACA
TGATTTCGAATTAGAAGGCATGGACGTAGATGCGGCGTATTTGGACGCCT
CGGTGGGAGAAGAGCTGTTTGTTAAGCTACCCCTCGAGGTTTCCCCTTTC
TCCCAAGACATACCGTTTGTGCGCCGCCTGCGTAAAAGCCTGTACGGCCT
CAAGCAGAGCGGCCGAAACTGGAACAACACTCTTGACGATTGTCTTGTTG
GGATAGGACTCGACCATTCCACTACCGACTCATGCTTGTACTTTTCCCGC
GACGATTGGAGAGAGACAAACCTTCTGGTGGCCGTGTATGTTGACGACCT
GGTCCTTGCTGGCCGTCGTGAGAAAGTAGATGAGTTCGAACATAACATAA
GTCAGTGTTTTAGGATGAAAGACTTGGGATCTCTCTCGCGCGTGTTGGGA
ATAGAACTACGACGTGACTGCCCTAATGGTGCCATAACCACCTCGCAGGG
TAGCTGCATTCGCGGGGTACTAAAAAGATACGGTTTTGACGAGTGTCGAG
GGGTACCCACCCCTGTAGAGGGAAAAGTGAAGATTTCGGCACCCGAAGGG
AGAAGTGGCAATTCAATTGAGTACAGAGGCATGGTAGGATCACCCATGTA
CGTCTCGACAGGAACTAGACCTGATATAGCATACGCGGTACACAGGGAGA
AGTGGCAATTCAATTGAGTACAGAGGCATGGTAGGATCACCCATGTACGT
CTCGACAGGAACTAGACCTGATATAGCATACGCGGTACAC
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