prot_H-paniculata_contig5458.12914.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5458.12914.1
Unique Nameprot_H-paniculata_contig5458.12914.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length317
Homology
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BLAST of mRNA_H-paniculata_contig5458.12914.1 vs. uniprot
Match: D8LAX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX3_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 1.860e-56
Identity = 96/165 (58.18%), Postives = 121/165 (73.33%), Query Frame = 0 
Query:   16 ALGQIPDPTEVLQTPKGGAIDPHTRLKGYTMSTMLGISQVWFVTHHVGHVMKTLRSGRLEELHRRMKRNPHVLDVKVCRAVLWWNILGEAMDAAREAENRRSRRREMRQLVVALAVSQRRAGRAERSVLSPDSPYRRLLNRALSPIPLREEGMDESYSLPPQERA 180
            + G++PDP+EV QT +GGA+DPHTRL GYT STMLG++QVWF  HHVGHV+KTLRSGRL++LHRRMKRNPHVLD +VCRAV+WW+IL EAM+AA+EAE RR+  RE R+LVV LAVSQRR+    R   +     +R    + S +         ++SLPP   A
Sbjct:    6 SAGRVPDPSEVFQTRRGGAMDPHTRLPGYTCSTMLGVTQVWFTAHHVGHVLKTLRSGRLDDLHRRMKRNPHVLDARVCRAVIWWSILAEAMEAAKEAERRRAXXRECRRLVVGLAVSQRRSDPGTRRGKTSTHEQQRASGGSRSGM---SRSSSRTWSLPPLTEA 167
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BLAST of mRNA_H-paniculata_contig5458.12914.1 vs. uniprot
Match: A0A6H5JYH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH9_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 9.870e-38
Identity = 72/117 (61.54%), Postives = 85/117 (72.65%), Query Frame = 0 
Query:   35 IDPHTRLKGYTMSTMLGISQV---------------WFVTHHVGHVMKTLRSGRLEELHRRMKRNPHVLDVKVCRAVLWWNILGEAMDAAREAENRRSRRREMRQLVVALAVSQRRA 136
            +DPHTRL GYT STMLG++QV               WF  HHVGHV+KTLRSGRL++LHRRMKRNPHVLD +VCRAV+WW+IL EAM+AA+E         E R+LVV LAVSQRR+
Sbjct:    1 MDPHTRLPGYTCSTMLGVTQVIDGSHQATSDLAPDVWFTAHHVGHVLKTLRSGRLDDLHRRMKRNPHVLDARVCRAVIWWSILAEAMEAAKEXXXXXXXXXECRRLVVGLAVSQRRS 117
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5458.12914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAX3_ECTSI1.860e-5658.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYH9_9PHAE9.870e-3861.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5458contigH-paniculata_contig5458:3569..10265 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5458.12914.1mRNA_H-paniculata_contig5458.12914.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5458 3551..10768 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5458.12914.1 ID=prot_H-paniculata_contig5458.12914.1|Name=mRNA_H-paniculata_contig5458.12914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=317bp
MCTVGRNRRRASAPPALGQIPDPTEVLQTPKGGAIDPHTRLKGYTMSTML
GISQVWFVTHHVGHVMKTLRSGRLEELHRRMKRNPHVLDVKVCRAVLWWN
ILGEAMDAAREAENRRSRRREMRQLVVALAVSQRRAGRAERSVLSPDSPY
RRLLNRALSPIPLREEGMDESYSLPPQERAGIELLCPLSSTVAGVGEWHS
RAPFGGGTQDFRSRILVKKEMENSGGVSHAGEGIDFACPPPSPENSRGGG
EEGVNVRLACSSPVSHGEVREGDCGCRSEALGSREKRKEDVVEMGDRKDM
VHLDEAAVLRRVYDYL*
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