prot_H-paniculata_contig54565.12912.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig54565.12912.1
Unique Nameprot_H-paniculata_contig54565.12912.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length50
Homology
BLAST of mRNA_H-paniculata_contig54565.12912.1 vs. uniprot
Match: D8LRG7_ECTSI (Sideroflexin 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG7_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 2.250e-12
Identity = 34/38 (89.47%), Postives = 35/38 (92.11%), Query Frame = 0
Query:    1 KILKSDNDTHEFVAYFQKEMEAKDGAISKLNDELIRKE 38
            KI KS+NDTHEFVAYFQKEME KDG ISKLNDELIRKE
Sbjct:   46 KIFKSENDTHEFVAYFQKEMETKDGIISKLNDELIRKE 83          
BLAST of mRNA_H-paniculata_contig54565.12912.1 vs. uniprot
Match: A0A7S2UZS8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZS8_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.140e-6
Identity = 25/39 (64.10%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    1 KILKSDNDTHEFVAYFQKEMEAKDGAISKLNDELIRKEV 39
            K+ KS+ DTHEFVAYFQ+EME KD  I+ L D L++KEV
Sbjct:   65 KLAKSEKDTHEFVAYFQREMENKDEIIANLKDNLVQKEV 103          
BLAST of mRNA_H-paniculata_contig54565.12912.1 vs. uniprot
Match: A0A2R5G805_9STRA (Basal body-orientation factor 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G805_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.920e-5
Identity = 25/42 (59.52%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    1 KILKSDNDTHEFVAYFQKEMEAKDGAISKLNDELIRKEVRLE 42
            K  KS+ DTHEFVAYFQ E+E KD  I+KL +E  R E R E
Sbjct:  461 KAAKSEKDTHEFVAYFQNEIEKKDATIAKLAEESNRSEARAE 502          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig54565.12912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRG7_ECTSI2.250e-1289.47Sideroflexin 2 n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A7S2UZS8_9STRA1.140e-664.10Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2R5G805_9STRA1.920e-559.52Basal body-orientation factor 1 n=1 Tax=Hondaea fe... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig54565contigH-paniculata_contig54565:253..402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig54565.12912.1mRNA_H-paniculata_contig54565.12912.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig54565 253..402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig54565.12912.1 ID=prot_H-paniculata_contig54565.12912.1|Name=mRNA_H-paniculata_contig54565.12912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=50bp
KILKSDNDTHEFVAYFQKEMEAKDGAISKLNDELIRKEVRLETCTLTSA*
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