prot_H-paniculata_contig54444.12900.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig54444.12900.1
Unique Nameprot_H-paniculata_contig54444.12900.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length112
Homology
BLAST of mRNA_H-paniculata_contig54444.12900.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 6.880e-14
Identity = 36/78 (46.15%), Postives = 58/78 (74.36%), Query Frame = 0
Query:   33 TTFFLTLYVDGLIFLGSDKGLLEKLNLQLMRCFKTSNMGDVSLVLGMEVSRDREAGTLTISLENYTKAMVSKYGMETC 110
            T   +TLYVD L+ +G +  ++E +  +LM  F+ S +G+VSLVLGM+V+RD E GTLTI+  +YT+++++++GME C
Sbjct:  234 TIVIITLYVDDLVVIGGNIEVIEAIKTKLMEQFQMSVLGNVSLVLGMQVTRDGEHGTLTITQADYTRSILARFGMEEC 311          
BLAST of mRNA_H-paniculata_contig54444.12900.1 vs. uniprot
Match: A0A6H5KXM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM1_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 9.980e-14
Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 0
Query:   36 FLTLYVDGLIFLGSDKGLLEKLNLQLMRCFKTSNMGDVSLVLGMEVSRDREAGTLTISLENYTKAMVSKYGMETC 110
            +LTLYVD L+  G++   +  +  +L + FK ++MG+V LVLGME+ RDR  G LTIS E YTK+++ ++GM  C
Sbjct:  762 YLTLYVDDLLLAGNNSNAISMIKKKLKQRFKMTDMGEVKLVLGMEIKRDRNQGALTISQEAYTKSILERFGMSEC 836          
BLAST of mRNA_H-paniculata_contig54444.12900.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.360e-13
Identity = 35/75 (46.67%), Postives = 53/75 (70.67%), Query Frame = 0
Query:   36 FLTLYVDGLIFLGSDKGLLEKLNLQLMRCFKTSNMGDVSLVLGMEVSRDREAGTLTISLENYTKAMVSKYGMETC 110
            +LTLYVD L+  G++   +  +  +L + FK ++MG+V LVLGME+ RDR  GTLTIS E Y+K+++ ++GM  C
Sbjct:  651 YLTLYVDDLLLAGNNSRAISMIKKKLTQRFKMTDMGEVKLVLGMEIKRDRNQGTLTISQEAYSKSILERFGMSEC 725          
BLAST of mRNA_H-paniculata_contig54444.12900.1 vs. uniprot
Match: A0A6H5JIN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN1_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.390e-13
Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 0
Query:   36 FLTLYVDGLIFLGSDKGLLEKLNLQLMRCFKTSNMGDVSLVLGMEVSRDREAGTLTISLENYTKAMVSKYGMETC 110
            +LTLYVD L+   ++   +  +  +L + FK ++MG+V LVLGME+ RDR  GTLTIS E YTK+++ ++GM  C
Sbjct: 1008 YLTLYVDDLLLASNNSNAISMIKKKLKQRFKMTDMGEVKLVLGMEIKRDRNQGTLTISQEAYTKSILERFGMSEC 1082          
BLAST of mRNA_H-paniculata_contig54444.12900.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 4.290e-13
Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = 0
Query:   36 FLTLYVDGLIFLGSDKGLLEKLNLQLMRCFKTSNMGDVSLVLGMEVSRDREAGTLTISLENYTKAMVSKYGM 107
            +LTLYVD L+  G+D   +  +  +L + FK +++G+ SLVLGME+ RDREA TLTIS E Y K+++ ++GM
Sbjct:  114 YLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGM 185          
BLAST of mRNA_H-paniculata_contig54444.12900.1 vs. uniprot
Match: A0A6H5KMG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG0_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 4.660e-13
Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = 0
Query:   36 FLTLYVDGLIFLGSDKGLLEKLNLQLMRCFKTSNMGDVSLVLGMEVSRDREAGTLTISLENYTKAMVSKYGM 107
            +LTLYVD L+  G+D   +  +  +L + FK +++G+ SLVLGME+ RDREA TLTIS E Y K+++ ++GM
Sbjct:  500 YLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGM 571          
BLAST of mRNA_H-paniculata_contig54444.12900.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 4.900e-13
Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = 0
Query:   36 FLTLYVDGLIFLGSDKGLLEKLNLQLMRCFKTSNMGDVSLVLGMEVSRDREAGTLTISLENYTKAMVSKYGM 107
            +LTLYVD L+  G+D   +  +  +L + FK +++G+ SLVLGME+ RDREA TLTIS E Y K+++ ++GM
Sbjct: 1508 YLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGM 1579          
BLAST of mRNA_H-paniculata_contig54444.12900.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.700e-12
Identity = 34/72 (47.22%), Postives = 52/72 (72.22%), Query Frame = 0
Query:   36 FLTLYVDGLIFLGSDKGLLEKLNLQLMRCFKTSNMGDVSLVLGMEVSRDREAGTLTISLENYTKAMVSKYGM 107
            +LTLYVD L+  G+D   +  +  +L + FK +++G+ SLVLGME+ RDREA TLTIS E Y K+++ ++G+
Sbjct: 1343 YLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGI 1414          
BLAST of mRNA_H-paniculata_contig54444.12900.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 5.750e-12
Identity = 34/72 (47.22%), Postives = 51/72 (70.83%), Query Frame = 0
Query:   36 FLTLYVDGLIFLGSDKGLLEKLNLQLMRCFKTSNMGDVSLVLGMEVSRDREAGTLTISLENYTKAMVSKYGM 107
            +LTLYVD L+  G+D   +  +  +L + FK +++G+ SLVL ME+ RDREA TLTIS E Y K+++ ++GM
Sbjct:  674 YLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGM 745          
BLAST of mRNA_H-paniculata_contig54444.12900.1 vs. uniprot
Match: A0A6H5KL30_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL30_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 3.750e-11
Identity = 33/72 (45.83%), Postives = 51/72 (70.83%), Query Frame = 0
Query:   36 FLTLYVDGLIFLGSDKGLLEKLNLQLMRCFKTSNMGDVSLVLGMEVSRDREAGTLTISLENYTKAMVSKYGM 107
            FLTLYVD L+  G++  ++  +  +L +  K ++MG+V LVLGME+ RDR  GTLT S E Y+K+++ ++GM
Sbjct:  950 FLTLYVDDLLLAGNNANVMLMIKNKLKQRSKMTDMGEVKLVLGMEIKRDRNQGTLTTSQEAYSKSILERFGM 1021          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig54444.12900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J6N1_9PHAE6.880e-1446.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KXM1_9PHAE9.980e-1446.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL37_9PHAE1.360e-1346.67Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JIN1_9PHAE1.390e-1346.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE4.290e-1348.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KMG0_9PHAE4.660e-1348.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J842_9PHAE4.900e-1348.61Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KJH6_9PHAE1.700e-1247.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNH5_9PHAE5.750e-1247.22Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KL30_9PHAE3.750e-1145.83Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..111
e-value: 1.4E-12
score: 47.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig54444contigH-paniculata_contig54444:138..473 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig54444.12900.1mRNA_H-paniculata_contig54444.12900.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig54444 138..473 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig54444.12900.1 ID=prot_H-paniculata_contig54444.12900.1|Name=mRNA_H-paniculata_contig54444.12900.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp
ISHESFFTPVHLGEVNQSLYIVTSRETRIKPETTFFLTLYVDGLIFLGSD
KGLLEKLNLQLMRCFKTSNMGDVSLVLGMEVSRDREAGTLTISLENYTKA
MVSKYGMETCNL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2