prot_H-paniculata_contig5437.12885.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5437.12885.1
Unique Nameprot_H-paniculata_contig5437.12885.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length130
Homology
BLAST of mRNA_H-paniculata_contig5437.12885.1 vs. uniprot
Match: D7G417_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G417_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 1.040e-44
Identity = 64/88 (72.73%), Postives = 74/88 (84.09%), Query Frame = 0
Query:   40 VRGQPQMAEAAPLVAPPGAPTLGMYVEDRYCGLVTWIVATVGAFPCACFCPCDRRTVWLAGDLKYNEKGAVVDDNIFLNPFPKGSICH 127
            V GQPQ AEAAPLVAPPGAPT+GM+VE+RYCGL TW++  VG  PC+ FCPCDRRTVW++G +KYNEKGAV DD +FLNP P GS CH
Sbjct:   19 VIGQPQSAEAAPLVAPPGAPTVGMWVEERYCGLTTWLITLVGGLPCSYFCPCDRRTVWVSGGVKYNEKGAVTDDYLFLNPCPPGSTCH 106          
BLAST of mRNA_H-paniculata_contig5437.12885.1 vs. uniprot
Match: D8LMJ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMJ4_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 5.570e-40
Identity = 60/88 (68.18%), Postives = 73/88 (82.95%), Query Frame = 0
Query:   35 PPSYVVRGQP--QMAEAAPLVAPPGAPTLGMYVEDRYCGLVTWIVATVGAFPCACFCPCDRRTVWLAGDLKYNEKGAVVDDNIFLNPF 120
            P +Y V GQP  Q AEAAP++A PGAPT GM+VE+RYCGL TW++  VG+FPC+ FCPCDRRTVW+AG  KYNEKGA+VDD +F+NPF
Sbjct:   22 PTAYAVTGQPVPQAAEAAPVMAAPGAPTTGMWVEERYCGLTTWLITVVGSFPCSYFCPCDRRTVWVAGGKKYNEKGAIVDDQLFVNPF 109          
BLAST of mRNA_H-paniculata_contig5437.12885.1 vs. uniprot
Match: A0A6H5JEI3_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEI3_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 1.670e-10
Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   37 SYVVRGQPQMAEAAPLV--APPGAPTLGMYVEDRYCGLVTWIVAT-----VGA-FPCACFCPCDRRTVWLAGDLKYNEKGAVV 111
            S VV  QP       +V   PP AP  G + ++RYCGL+TW+VA      +G   PC   CPCD RTV++A  ++YN+ GA++
Sbjct:   88 SEVVTTQPGPGHTVTVVRNCPPNAPDGGQWRQERYCGLITWLVALFVVPFIGCCMPC---CPCDERTVYIAHGVRYNKDGAII 167          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5437.12885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G417_ECTSI1.040e-4472.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMJ4_ECTSI5.570e-4068.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JEI3_9PHAE1.670e-1042.17WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5437contigH-paniculata_contig5437:4894..13366 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5437.12885.1mRNA_H-paniculata_contig5437.12885.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5437 3540..13440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5437.12885.1 ID=prot_H-paniculata_contig5437.12885.1|Name=mRNA_H-paniculata_contig5437.12885.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp
MVSGYPGQEEMQPIASTVQEAYSEVSSSGQTFTMPPSYVVRGQPQMAEAA
PLVAPPGAPTLGMYVEDRYCGLVTWIVATVGAFPCACFCPCDRRTVWLAG
DLKYNEKGAVVDDNIFLNPFPKGSICHKP*
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