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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 6 |
| Model size | 1288 |
| Cds size | 960 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5421.12867.1 >prot_H-paniculata_contig5421.12867.1 ID=prot_H-paniculata_contig5421.12867.1|Name=mRNA_H-paniculata_contig5421.12867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=320bp
MFSPAWVVLWTALAVVASANTVRECLVELLVLVAVIRPLGNTTMVISVAM
LFLFLNARRFRARCKRWMMCKARRAKGMRLKRARSAAYRGILLPRDQVIK
LPQDTMTIEIPQDIMTTALPEDFIIETPQSMVTGEPRNTSENQVYNDQTR
PQRVNTLQEEEVLVDQTNPQRVNVLQEEVTLLRGALIDAKAELEDTVRTS
ERQLDSDAASLASFKKENEACSVEIGQLAIAMDAEKNKTALLKRELLETF
KISARSTDRHEKTIGLLKEDLRDTIVESERKRQMDADTIAMLTAEVSRAR
HDLHDAEGIIHWQGVEMATV back to topmRNA from alignment at H-paniculata_contig5421:19..8177- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5421.12867.1 ID=mRNA_H-paniculata_contig5421.12867.1|Name=mRNA_H-paniculata_contig5421.12867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8159bp|location=Sequence derived from alignment at H-paniculata_contig5421:19..8177- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGTGTCATGGTCCCCGAGGGTATCCCACTTTTCCCATCTAAAAACTATG
GTGCCCGAGAGTATACTACTTGTTCTTTCGGGAATTTGCTTCAACACACC
AAGAACATTAGAGGCAACGAGCGTCAAACAAGCTCACTGATCAAACTTGC
TGTGGGCTGCAAAAACATGGGAATGTGGACCTCGATATCATGGCGAGCTT
CCGACAGATTTCAGGGGCGCTGAGTGTGGAGGGAAGAGAGGAGGCTACGA
AGAGGGAGAGATCTCTCACGTTCGGTACATCTAACATACGGAATATTTCC
TAACTTCCCAAAAGGTGCTAGTCCCTCGGTATATCTTTTTCCCAAAAGGT
GTTATTTGGTTCACCCCCTCATCCTCACACTTTACAACAGCCTCATTTTT
TTCAGAGACAATAATCTGTCGCACAGACAACCTGATACTTTTACTGGCTG
TTTGTCTTGTATGTCCTGTACTGTAAAGAGTCTGCCTTGGCAAGATGAAT
CCACTAGACCGTGGTCGCGTCCTGTTGTGGATGGCGATCATCGCCGTGTG
CGGGTGGCACGTAGTTTCGGAGTTCTCGGGTACCGGCAGGCTCCACTTGT
CTGCGCTGGGTGAGCTTGGAGACGCCTGTTCGTTTACCATCAGCGGCATG
TTATATTATGATTTCAGCTGGTGAGTGACACGCGGCGGCAAGCAAGAACA
GAGAGGCAGACCAGTTGGTCTACGCTCAGTCAGACGAGCAGACAAGCACA
CACGTGAATAACGGAGAAGTGACACGCTTGGGGAATTCGATGCGCCCTAA
GCCTATACACATGACGGTAACTGTGATGTGTCGTGACTGTGAAGCGTTCG
AGCAGAGAGCAAGTGACCAACAATAAACATATGCCCGGTTTATGTTGAAT
GAAATATGAACTGGAGCTGATCCCAGTTCAGGGTCATGACATGGTTGAAT
TACTGTAATAGTGTCACTTGGTTGTATGAGGCTTGAGGACCGTCTGGTTG
TCGTCTGTGGAAATACATGTAGGGTAATTGATGTTACTGTATTGTCGAAA
TCGCGCGCGGGCAAAGCTAGGAGGGCCACCCTGACCCCAACTCGAATTCC
ATGGCTGTGTCTTGACCCCGGAATTAGGAGTGAGGGAAAATATGAGACCC
TTGGATGGTACATTTACAGTAATGTATGTACGGAGGGCTGTAAACACGGT
ATGAAGAAGCATGAAGTTTAACAATTCGCGTCTGGTTCGTGCAGCGTTGC
AAGTCAAGGTCGCCGTGTTGTTTCCAGCTGGTAATTATAAAATCTACGAC
ACTTCGCTCGCGTTTTTATCTGTTCTCGTTTTCCCTGTTGTATGGTGAGG
CGTAGAGTCGGAGTTCGTTGGGCCTTGTTGGTCCTTGTTGAGTCAATAGT
TGCCGTTGGGATACCTTGCTGGACTATTTCTGATAGTTGAGCAGTATGGA
CAAGCATGCAGTAGGGTATGGTCAGCATTGCCGCATATTCATCGATGTTG
TTAGTACGGTACAAAGTGTTTAGGTTACTGCATTCAATGTATGCGGCAGC
AGAGGGCAGTTATGTCGGAAACTAAAGATACCGGCGAAAAATCCTCTTAG
CCCACTCCCCCTTCTCCTAATGTAATGCATGACATAAAAAGACAAGTTTC
CTACGCCCGTAAGAAGTCAGTTACAGTAAACACAGTATTAATAACCTTCA
CTCTGCCCTTTCTGTCTCTCTGACTGACTACTGTTGACTGTTGACTGTGT
GTTACTGCCTGTCATAGGTGGATTCGCGGGATGTTCTCGCCGGCTTGGGT
AGTGCTCTGGACAGCCCTAGCGGTAGTCGCTTAAAATCCTCTTAGCCCAC
TCCCCCTTCTCCTAATGTAATGCATGACATAAAAAGACAAGTTTCCTACG
CCCGTAAGAAGTCAGTTACAGTAAACACAGTATTAATAACCTTCACTCTG
CCCTTTCTGTCTCTCTGACTGACTACTGTTGACTGTTGACTGTGTGTTAC
TGCCTGTCATAGGTGGATTCGCGGGATGTTCTCGCCGGCTTGGGTAGTGC
TCTGGACAGCCCTAGCGGTAGTCGCTTCAGCGAACACGGTCCGGGAGTGC
TTGGTTGAGTTGCTGGTATGGCAGTGCTTGCTTGCGTCTTGTACATGCAG
TATACCTTGTATGGCATAGAATGTCGAAATACGACAAAAATCACAATATC
GCGTCTAGTTTGTGCAGCATTGAAAGCTCCTCAGCAACTTGTCAATATTG
TTGGCCGGTTACTTTCAATATTTCACCAGTGACCAGTGTGTTCTAGAAGT
TTAGGATGGCTTTTTTCTTTAGGATGAAACGTGTTTCTCTCGATTTTCCC
GATATTACATGCCGAATCAAGCATGACTCGAACAGAGTCGGTAAAGGTAC
ATGGCATCAGCGTTCGTTGGGTGTTGATATTTTTCGTGTTGGGTCCTCTG
CTCCCGAGATATGGACTTTCAAAGCAACAGTCTAGTAGCCGTTCACGGTT
CCCCTTGATGTTTCTGTTTCTCCTTACATGTTGAGATTCCCTGATCCCAA
TTTGGACGAAAGCAGACCCATTCTCTATCCCTATAGAAGAGAAGAATATT
TCAAGCTCATTGGGTTTTGAGGAGGATGGGATATTTTTATTGCATAAGTT
ATAACTGAACTGTTTTTATCCTAAAGCAAAAACCCATCCTAAATTTCTAG
TACACACTGTTAATGACTGCGTAGTTGATGACGGCATCAAAATATGCCTT
TTAGATATGGAAAAAATAACGCCTCTGTTCTTACATAAGTAGGCTGGTGA
TTTTGGAATGATCGAATGCTGAGTAGTACCCTTACCATAGAAGATGCTGT
CATGTTTTCTTGTGGCAGCTTGCGGTCGTTGTGCCGGCGCAGTGTTGGTC
TGTTTCCCCCTTTCCCGCCTTAGTTGTACAGTAATATTTAATATTTTCGC
GAACATTTTAACGATTTTTTCCAACAAAAGTCTATTTTCTTTGTTAACGC
CCTTTTCGCGCTCCCTCCCAATTTGATACATGTAAATACGGCAGGTGCTA
GTCGCGGTCATTCGGCCGCTAGGAAATACGACGATGGTCATCTCGGTGGC
CATGTTATTCTTATTTCTAAATGTGAGGGAGATGTTGTGGCACCACTACT
ACTACCCACTACAAGTAGAGGTTCGGACAAAATAAGGCACGCTGTCTGTG
ACATAGTGATTTGTATTTTAGTGAGTAGCGTGGTGGACGTTTCCTGGAGT
CCCTGGCAATGGTACGAAGCCCATTCTGCAACGGAATTTCTGTTAAGGAC
AACGGTCGGATTTTGTGTGCGACTTACGTCGAGCCGAGCAAAAACATTTT
ACCGGGCTCGACCCAGCACTCAAGACTCTGCAACAAAACGATGAATTGTC
GTGGTGGTTCACTCCACAAGTCGGATGCTCCGTTCGTTTTCTTTTACACC
CCGTCGTTTTCTCCCACCCAGGCGCGACGGTTCCGTGCCAGGTGCAAGCG
ATGGATGATGTGCAAAGCTCGCCGGGCTAAGGGGATGCGGCTCAAGCGGG
CGAGATCTGCCGCATACCGTGGGATATTGCTACCACGGGACCAGGTTATC
AAGCTACCACAGGATACCATGACTATCGAAATACCACAGGACATCATGAC
TACCGCACTCCCAGAGGACTTCATCATCGAAACACCTCAAAGCATGGTGA
CCGGCGAACCGAGGTACATAATGGCTACACATTTGTAAGGAATTTTAGGG
CGTGTTCAAATCTTGACTCGTGAGACCTATTGAGGATTCGTTTTGTCTTG
TCGGTTTGATTAAAAGAGCTGCATAGACCTAACAGACATATGGGGAAGTA
TCATTATCTTTTGGCACTTGCTGAGACAAACATGGTAGTGCGTAAAAGAC
AATTGTTGGGACAATTTGATCTTATTTTATCGTGACGGTTTAAAAAAAGC
TGGTTGCGATCAAATGTACTGCACTATATTGATTATGTTGTTACTGTACG
GTTATGTATGGCATATTTTGATGAAATACTTTATCCACGATCTTCGACGA
TGTTGAAGATAAATGTATGCTTGCTCTCTTGCTGTAGTTTTATTTTGCGG
AAACCTTATCAAAATCGATATTTAGCTGCTGAATGCTCGTTGTTTCGGAA
TTCATGCGTTTGTGGTTTTGCTCCCATTTTGGACTTGTTTTACTTCATAT
TTCCCCTGTATATTTCGACTGTTTGTTTGATTGACTGCCAGTAGCGTTTT
GTAGATACAGTTTTTTTCACGCAAGGATCGTATGCCTGCCCTGATATTTT
GATGACCGCTTGCCTTCAAGTATGTTTCACGAATCATATAGTGAGAATGT
TAGGCAAGGTGACAACAGTGTCCGTGTTTCCAACAGCGTGAATATACACT
TCGCTGCCGCTGCAACAATATGCGACGCGTACGCGCGCTACGTGACCGAC
CTTGCCTTTCGTACTCGGGGCAATGTGACGACTTCCATATATTTCGTGAG
GTAACAGCCAACTTAGATAAGACCTTTCTAGCATGATACAACATACGCTG
GGTTGGAACATGTATAGAGCTAGAGGTAATGCCTTACTAAGGGAATTGTT
TTTCCCACCCGCTGTGACTTTGTGCATAGTTATTCAAATTACTATTCTTT
TTTTTTCATTTTTTCAATTAATTCCCCCGAGCCATTTGCGGCCGCTTGCG
TAAGAAACGGAAATCAGTAGCCCGAGAAACAGCACCATGAGTGAGCTTCA
GAACTGTGTAGCAAGTTCGGAGAAATCCCGACCCGCTCGCGAAGCATGCC
AAGCACTGTAACGTCAAAGATTTCTTTTTACTTACGACCTTCTCGTTTTT
TTTTCAAGCAACCCTGCGCATCATTTGAGCCCGCCCGCGGTAGAAACGAC
AATCAGTGGTCCGAGAAACAGGACGTTACGTAAGGTCCACAATTGTTCAG
TAAGTAATTCCGAAAAAGATGGACTTGCTTGGCGTGATGTACGTCAAAGA
CCATCCAACCACTGCGATTTCTAAGGCAATAGTCATCCTACGGTAGGGGG
GGGGGGAGGTATTTGAGCCGCTTCGTTTAACGAAGGATCCGCTTTGAGAA
GGGGATTAGGCATTTCTAGTCTTTTTATTTTTGCATTTGTCGCCCCTCCT
TAAACAGAAATCTCATTTCAACTAGTGAACTATGCACCTTGATGGACGCA
CAAACACATGCACTTGACATGGTTTTGATTCCCGGTATATTCACTCTGCT
TTTGCGAATCGGCCTTCGTCAAACAATCGACACCCCCCCCTCCCCTACCT
TAGGATGACCCCGAAAATAGGCCGAACACTTGGAAATTCCCAAAAGTCTT
TCAGATTCGGAATCCTCGTCAACAGCCACAAAATCAATCTTTTGGTTTGT
CTGTTACTTTCACGTTTCGAAGGAACGCTGGTATAAGGGCAGAGAGAGTG
TGATTTGAGCAAGGTAATATTTTGACTGAATCAACTCCGATTTCATTGAA
GGTTCGGAGGATGTTTCTTTATATGATGAAGATGAATGAATGTATATATA
TATTTTTTTATTTATGTTGGGGATAAAATGTGCCGGTCGAGCACGCACGC
CATAGTCAAATCTCGATGAAGATAACCCGGGGAGAAGGCGCCTAAATGCC
CGGATCATGTTGTGCCTTCAATATTTCTTCCATTAGACGAAGCGCCTATT
GTCGGTACGTGTGCTAAAGGAGATGTCACGACGGGTTTATTTTGAGAAGT
GCCCCTTCATAGGCACATCCTTTTTTTGGTACCTGTTTGTCACCGTCACA
GGTGGTGTTTAATTCAACTTCTCTTCCATTTTTTGTGTTTCCCCCCCCCA
AGATATCGGGTATTACGTTTCAATGTTGACTTTGGTGAGATGTCTTCAGG
GCTTTCTGATTCTTGGTACTTCCCACAAACGAGGACATCGCGTGCGGAAT
GCCTTGGGTGTCCTTTCACGGAGATATGTACCTCTATTCACTTATCGTTA
TCGTGTAATATCGTATGGTGGTTGCGGTGGTGGTGATGGCCGTCCTCGTC
GTCTCGGAACAGCTTTCCAAATCTTTACTCCAGTAATTCTTGAAATAGTA
ATTAAAAACCTACGTGCGAGCCTCAGCACGCGTAGCGAGCAGTGTTGTGG
GCTATGTGAGCCCCCATGCGAGCTCAATGAGCCCGCGGTGAAGACAGGCC
AGCACGAAGTGTATGGGCTTAGCCGTGACTCTACTACTAGCATCTGCCAA
TAAAAGTCATTCCTTGAAATCCGTTGTGATAAATGTTGAACGTAGGCATT
CGTTATGCCGCGCCGTCTGTTTTTCTTTCTTTTTGAAGTTAGAATCAATG
TGGGTTCACGTACACTATTTTCACATAGTTTCAACAGGCGATTCCATGTG
TTTCCATGTATTAGGTTGAGGTTGTTTTTCAATGTACATCTTCAAACTTG
GTCGTTCTTGGAAAGATGCCAAATTAGTGTTTCTCACATTCGGATATATA
TATATATATATATATACACATACATACCGTACAGTAATATTAGTAGGATA
GCAGCGACCGGGTTCTTGCCTAACGGGAGGTGTGGAGATGGTGATAGTTT
AAAGCTACCATGTAGATATATATATATATATATATATATATATGTATATA
GTTTTTATTTCAGTCTACGGTAGTAGCTCTATAGTTGATAACCATATCTT
TGTAATTCTTGCTTTTTACGCTGAACATTGAATTACTATAAGGCTGGTTG
ATTTATTGACATCTCTTTTGAGTTGTGTTTTTCCGGTTTTGGCCTCCGGT
ATCTACCTACCACTGTTTCAGTACTGTTTCACAGAAGATGATTTTGATCT
ATAATGTTGAAATTTTCAAGTTGTGGGTCAGCTATGGACTATGTGCAGCT
AATAGTGTGTAGTCACTAGCGCGGGAAAAGCAAAATAGAAATGCCAGGAA
ATTTGACGCTTTTGATTCAAGTGCTGAATTGTCGACGGTACAGGAGGGTA
TCGTGGTGTACACACGTGATTTTTTATTTTTATTAAGGTAACCGTGTACG
CTGGGTAGGTAGTCCGAGGGCTTGCGCCAAACATCAATCGATGGTGTATG
TTTTTTACACCTGTTTTCCCCCGCCCCGACTGTACTCGTGCTGCCGTGCG
GATATCGTAGAAACACGTCCGAGAATCAAGTGTACAACGATCAAACTCGT
CCTCAACGAGTGAATACCCTACAGGAAGAGGAGGTGCTTGTGGACCAAAC
TAATCCTCAGCGAGTGAATGTCCTGCAGGAAGAGGTGAATCTAGGCACTG
TTGTACTTTTGTCGAGCCTATGGTCTACCGCTCCCTTTAGGTATCATTGC
ATTAAATCCACGTTTCGTTTTTTCCAATAGTCCTGTAAGTGCGCCTTCTC
GCAGGTGAGTTGTGCCGGCAGGCTAGGCGGGGTGGGTTTCAGTGCAGTAT
GCCAAAGTGCCGCAATTTAGGTGACTAGTAGTACTAGTAGCATCGTTAAT
TCTATACTCTTGCTCTGTTTGTGAAGTGTGTGCCGTTTTGCTCATGAGAA
ATTGATATCAGGCATCGTAGACGTACATGAGCTTGAGGGAACCAGTGAGT
GCACTGGAAAACTGTGCTGCCCAATCCGAACAATTGGTAGGATGGAGTAG
CTGCACGCTTCAGGATGATACGCGATAGCGTTCGAAGTGCTCCGGCAGCT
TACTTGTTGACCGTACTAAACCCATTGCTGTAGGTAACCCTGCTCCGAGG
AGCATTAATTGATGCGAAGGCCGAACTTGAAGATACTGTCCGGACGAGCG
AGCGGCAGTTGGACTCCGACGCGGCGAGCCTCGCGAGCTTCAAGAAGGAG
AACGAGGCTTGCAGTGTCGAGATTGGCCAACTCGCGATCGCAATGGACGC
AGAGAAAAACAAGACGGCTCTTCTAAAAAGAGAGCTGTTAGAGACCTTCA
AGATCTCGGCTCGTTCCACCGATAGGCACGAGAAGACGATCGGTCTTCTG
AAGGAGGACCTACGGGACACGATCGTGGAGAGTGAGAGGAAAAGACAGAT
GGACGCCGACACCATCGCCATGTTGACGGCAGAGGTTTCTCGTGCCCGGC
ACGATTTACACGATGCTGAGGGTATCATCCACTGGCAGGGTGTGGAGATG
GCGACGGTC back to topCoding sequence (CDS) from alignment at H-paniculata_contig5421:19..8177- >mRNA_H-paniculata_contig5421.12867.1 ID=mRNA_H-paniculata_contig5421.12867.1|Name=mRNA_H-paniculata_contig5421.12867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1920bp|location=Sequence derived from alignment at H-paniculata_contig5421:19..8177- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCTCGCCGGCTTGGGTAGTGCTCTGGACAGCCCTAGCGGTAGTCGC
TTCAGCGAACACGGTCCGGGAGTGCTTGGTTGAGTTGCTGATGTTCTCGC
CGGCTTGGGTAGTGCTCTGGACAGCCCTAGCGGTAGTCGCTTCAGCGAAC
ACGGTCCGGGAGTGCTTGGTTGAGTTGCTGGTGCTAGTCGCGGTCATTCG
GCCGCTAGGAAATACGACGATGGTCATCTCGGTGGCCATGTTATTCTTAT
TTCTAAATGTGCTAGTCGCGGTCATTCGGCCGCTAGGAAATACGACGATG
GTCATCTCGGTGGCCATGTTATTCTTATTTCTAAATGCGCGACGGTTCCG
TGCCAGGTGCAAGCGATGGATGATGTGCAAAGCTCGCCGGGCTAAGGGGA
TGCGGCTCAAGCGGGCGAGATCTGCCGCATACCGTGGGATATTGCTACCA
CGGGACCAGGTTATCAAGCTACCACAGGATACCATGACTATCGAAATACC
ACAGGACATCATGACTACCGCACTCCCAGAGGACTTCATCATCGAAACAC
CTCAAAGCATGGTGACCGGCGAACCGAGGCGCGACGGTTCCGTGCCAGGT
GCAAGCGATGGATGATGTGCAAAGCTCGCCGGGCTAAGGGGATGCGGCTC
AAGCGGGCGAGATCTGCCGCATACCGTGGGATATTGCTACCACGGGACCA
GGTTATCAAGCTACCACAGGATACCATGACTATCGAAATACCACAGGACA
TCATGACTACCGCACTCCCAGAGGACTTCATCATCGAAACACCTCAAAGC
ATGGTGACCGGCGAACCGAGAAACACGTCCGAGAATCAAGTGTACAACGA
TCAAACTCGTCCTCAACGAGTGAATACCCTACAGGAAGAGGAGGTGCTTG
TGGACCAAACTAATCCTCAGCGAGTGAATGTCCTGCAGGAAGAGAAACAC
GTCCGAGAATCAAGTGTACAACGATCAAACTCGTCCTCAACGAGTGAATA
CCCTACAGGAAGAGGAGGTGCTTGTGGACCAAACTAATCCTCAGCGAGTG
AATGTCCTGCAGGAAGAGGTAACCCTGCTCCGAGGAGCATTAATTGATGC
GAAGGCCGAACTTGAAGATACTGTCCGGACGAGCGAGCGGCAGTTGGACT
CCGACGCGGCGAGCCTCGCGAGCTTCAAGAAGGAGAACGAGGCTTGCAGT
GTCGAGATTGGCCAACTCGCGATCGCAATGGACGCAGAGAAAAACAAGAC
GGCTCTTCTAAAAAGAGAGCTGTTAGAGACCTTCAAGATCTCGGCTCGTT
CCACCGATAGGCACGAGAAGACGATCGGTCTTCTGAAGGAGGACCTACGG
GACACGATCGTGGAGAGTGAGAGGAAAAGACAGATGGACGCCGACACCAT
CGCCATGTTGACGGCAGAGGTTTCTCGTGCCCGGCACGATTTACACGATG
CTGAGGGTATCATCCACTGGCAGGGTGTGGAGATGGCGACGGTCGTAACC
CTGCTCCGAGGAGCATTAATTGATGCGAAGGCCGAACTTGAAGATACTGT
CCGGACGAGCGAGCGGCAGTTGGACTCCGACGCGGCGAGCCTCGCGAGCT
TCAAGAAGGAGAACGAGGCTTGCAGTGTCGAGATTGGCCAACTCGCGATC
GCAATGGACGCAGAGAAAAACAAGACGGCTCTTCTAAAAAGAGAGCTGTT
AGAGACCTTCAAGATCTCGGCTCGTTCCACCGATAGGCACGAGAAGACGA
TCGGTCTTCTGAAGGAGGACCTACGGGACACGATCGTGGAGAGTGAGAGG
AAAAGACAGATGGACGCCGACACCATCGCCATGTTGACGGCAGAGGTTTC
TCGTGCCCGGCACGATTTACACGATGCTGAGGGTATCATCCACTGGCAGG
GTGTGGAGATGGCGACGGTC back to top
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