prot_H-paniculata_contig5414.12859.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5414.12859.1
Unique Nameprot_H-paniculata_contig5414.12859.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length227
Homology
BLAST of mRNA_H-paniculata_contig5414.12859.1 vs. uniprot
Match: D7FR28_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR28_ECTSI)

HSP 1 Score: 414 bits (1063), Expect = 1.390e-131
Identity = 197/226 (87.17%), Postives = 213/226 (94.25%), Query Frame = 0
Query:    1 MRGKDVFVLMPTGGGKSLCYQLPACCCPGLAIVFSPLISLVQDQVSQMLAIGVQAAYVNSEQDYDSEVRVVMDQLYHLNDYGGLKLLYITPEKYCRSPSMTRALQRLHSKGLLSRFVVDEAHCVSDWGHDFRPDYLNLHVLRKEFPDVPIMALTATANQVVRDDTIRRLGMRNPTVRTESFNRPNLTYEIKPKKAGILDEMAQVVQQFSGQSGIVYCLSRKDCEKV 226
            M+GKDVFVLMPTGGGKSLCYQLPACCCPGLA+VFSPLISLVQDQV+QM A GV+AAY+NSEQDYDSEVRVVMDQLY L DYGGLKLLYITPEK+CRSPSM +ALQRLHSKGLLSRFV+DEAHCVSDWGHDFRPDYL L +LRK+FPDVPIMALTATAN VVRDDTIRRL +RNPTVRTESFNRPNL YEI+PKKA +LDE+A+V+Q F GQSGIVYCLSRKDCEKV
Sbjct:  605 MKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVAQMRATGVEAAYINSEQDYDSEVRVVMDQLYRLQDYGGLKLLYITPEKFCRSPSMNKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAAVLDEIAKVMQSFPGQSGIVYCLSRKDCEKV 830          
BLAST of mRNA_H-paniculata_contig5414.12859.1 vs. uniprot
Match: A0A6H5L064_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L064_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 1.480e-115
Identity = 169/215 (78.60%), Postives = 182/215 (84.65%), Query Frame = 0
Query:    1 MRGKDVFVLMPTGGGKSLCYQLPACCCPGLAIVFSPLISLVQDQVSQMLAIGVQAAYVNSEQDYDSEVRVVMDQLYHLNDYGGLKLLYITPEKYCRSPSMTRALQRLHSKGLLSRFVVDEAHCVSDWGHDFRPDYLNLHVLRKEFPDVPIMALTATANQVVRDDTIRRLGMRNPTVRTESFNRPNLTYEIKPKKAGILDEMAQVVQQFSGQSGIV 215
            M+GKDVFVLMPTGGGKSLCYQLPACCCPGLA+VFSPLISLVQDQV                       RVVMDQLY L DYGGLKLLYITPEK+CRSPSM +ALQRLHSKGLLSRFV+DEAHCVSDWGHDFRPDYL L +LRK+FPDVPIMALTATAN VVRDDTIRRL +RNPTVRTESFNRPNL YEI+PKKAG+LDE+A+V+Q F GQSGIV
Sbjct:   59 MKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQV-----------------------RVVMDQLYRLQDYGGLKLLYITPEKFCRSPSMNKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAGVLDEIAKVMQSFPGQSGIV 250          
BLAST of mRNA_H-paniculata_contig5414.12859.1 vs. uniprot
Match: A0A7S1XRC4_9STRA (DNA helicase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRC4_9STRA)

HSP 1 Score: 299 bits (766), Expect = 2.080e-97
Identity = 148/230 (64.35%), Postives = 179/230 (77.83%), Query Frame = 0
Query:    1 MRGKDVFVLMPTGGGKSLCYQLPACCCPGLAIVFSPLISLVQDQVSQMLAIGVQAAYVNSEQDYDSE--VRVVMDQLYHLNDYGGLKLLYITPEKYCRSPSMTRALQRLHSKGLLSRFVVDEAHCVSDWGHDFRPDYLNLHVLRKEFPDVPIMALTATANQVVRDDTIRRLGMRNPTVRTESFNRPNLTYEIKPK--KAGILDEMAQVVQQFSGQSGIVYCLSRKDCEKV 226
            M G+DVFVLMPTGGGKSLCYQLPA CCPG+A+VFSPLISL++DQV+ M +IGV + ++NS QDYD E   + VM QLY L ++GG+KLLYITPEK   S S+ R LQRL  +GLLSRFVVDEAHC+S WGHDFRPDYL L  LR++FP VPIMALTATA++ V  D IR LGMR+P +   SFNR NL YE+K K  K+ +L E+A  V+    QSGI+YCL+RKDCE +
Sbjct:  135 MAGRDVFVLMPTGGGKSLCYQLPAWCCPGVAVVFSPLISLIEDQVNSMNSIGVTSCFINSTQDYDGEGGTKDVMTQLYQLPEHGGMKLLYITPEKLAHSESLNRVLQRLSERGLLSRFVVDEAHCMSQWGHDFRPDYLQLRTLRQKFPRVPIMALTATASERVVQDAIRTLGMRSPFIHKTSFNRQNLRYEVKKKGTKSAMLKELAAYVRARRHQSGIIYCLARKDCEML 364          
BLAST of mRNA_H-paniculata_contig5414.12859.1 vs. uniprot
Match: A0A7S4SBS1_9STRA (DNA helicase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SBS1_9STRA)

HSP 1 Score: 281 bits (719), Expect = 5.740e-89
Identity = 131/226 (57.96%), Postives = 174/226 (76.99%), Query Frame = 0
Query:    1 MRGKDVFVLMPTGGGKSLCYQLPACCCPGLAIVFSPLISLVQDQVSQMLAIGVQAAYVNSEQDYDSEVRVVMDQLYHLNDYGGLKLLYITPEKYCRSPSMTRALQRLHSKGLLSRFVVDEAHCVSDWGHDFRPDYLNLHVLRKEFPDVPIMALTATANQVVRDDTIRRLGMRNPTVRTESFNRPNLTYEIKPKKAGILDEMAQVVQQFSGQSGIVYCLSRKDCEKV 226
            M+G+DVFVLMPTGGGKSLCYQLPA CCPG+A+V SPL+SL+QDQV  M  +GV++ ++NS QD++SE R ++ +L +++ +GG+KLLYITPEK   S  +   + +L+++G+LSRFVVDEAHC+SDWGHDFRPDY  L  LR ++P+VP+MALTATAN+ V  D IR L MRN  +   SFNRPNL YE++ K +  +D MA  + +    SG++YCLSRKDCE V
Sbjct:  267 MQGRDVFVLMPTGGGKSLCYQLPAWCCPGVAVVVSPLLSLIQDQVQSMTKLGVESVFLNSMQDFESEQRDILRRLDNVSSHGGIKLLYITPEKLRHSGMIKSVMTKLYNRGMLSRFVVDEAHCLSDWGHDFRPDYNQLGCLRSDYPNVPMMALTATANEKVVQDAIRALKMRNEHLYRSSFNRPNLAYEVRKKDSKSIDVMADYIAKRRNDSGVIYCLSRKDCETV 492          
BLAST of mRNA_H-paniculata_contig5414.12859.1 vs. uniprot
Match: A0A7S4SEJ9_9STRA (DNA helicase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SEJ9_9STRA)

HSP 1 Score: 281 bits (719), Expect = 8.680e-89
Identity = 131/226 (57.96%), Postives = 174/226 (76.99%), Query Frame = 0
Query:    1 MRGKDVFVLMPTGGGKSLCYQLPACCCPGLAIVFSPLISLVQDQVSQMLAIGVQAAYVNSEQDYDSEVRVVMDQLYHLNDYGGLKLLYITPEKYCRSPSMTRALQRLHSKGLLSRFVVDEAHCVSDWGHDFRPDYLNLHVLRKEFPDVPIMALTATANQVVRDDTIRRLGMRNPTVRTESFNRPNLTYEIKPKKAGILDEMAQVVQQFSGQSGIVYCLSRKDCEKV 226
            M+G+DVFVLMPTGGGKSLCYQLPA CCPG+A+V SPL+SL+QDQV  M  +GV++ ++NS QD++SE R ++ +L +++ +GG+KLLYITPEK   S  +   + +L+++G+LSRFVVDEAHC+SDWGHDFRPDY  L  LR ++P+VP+MALTATAN+ V  D IR L MRN  +   SFNRPNL YE++ K +  +D MA  + +    SG++YCLSRKDCE V
Sbjct:  283 MQGRDVFVLMPTGGGKSLCYQLPAWCCPGVAVVVSPLLSLIQDQVQSMTKLGVESVFLNSMQDFESEQRDILRRLDNVSSHGGIKLLYITPEKLRHSGMIKSVMTKLYNRGMLSRFVVDEAHCLSDWGHDFRPDYNQLGCLRSDYPNVPMMALTATANEKVVQDAIRALKMRNEHLYRSSFNRPNLAYEVRKKDSKSIDVMADYIAKRRNDSGVIYCLSRKDCETV 508          
BLAST of mRNA_H-paniculata_contig5414.12859.1 vs. uniprot
Match: A0A7S4SBW1_9STRA (ATP-dependent DNA helicase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SBW1_9STRA)

HSP 1 Score: 281 bits (719), Expect = 5.310e-87
Identity = 131/226 (57.96%), Postives = 174/226 (76.99%), Query Frame = 0
Query:    1 MRGKDVFVLMPTGGGKSLCYQLPACCCPGLAIVFSPLISLVQDQVSQMLAIGVQAAYVNSEQDYDSEVRVVMDQLYHLNDYGGLKLLYITPEKYCRSPSMTRALQRLHSKGLLSRFVVDEAHCVSDWGHDFRPDYLNLHVLRKEFPDVPIMALTATANQVVRDDTIRRLGMRNPTVRTESFNRPNLTYEIKPKKAGILDEMAQVVQQFSGQSGIVYCLSRKDCEKV 226
            M+G+DVFVLMPTGGGKSLCYQLPA CCPG+A+V SPL+SL+QDQV  M  +GV++ ++NS QD++SE R ++ +L +++ +GG+KLLYITPEK   S  +   + +L+++G+LSRFVVDEAHC+SDWGHDFRPDY  L  LR ++P+VP+MALTATAN+ V  D IR L MRN  +   SFNRPNL YE++ K +  +D MA  + +    SG++YCLSRKDCE V
Sbjct:  283 MQGRDVFVLMPTGGGKSLCYQLPAWCCPGVAVVVSPLLSLIQDQVQSMTKLGVESVFLNSMQDFESEQRDILRRLDNVSSHGGIKLLYITPEKLRHSGMIKSVMTKLYNRGMLSRFVVDEAHCLSDWGHDFRPDYNQLGCLRSDYPNVPMMALTATANEKVVQDAIRALKMRNEHLYRSSFNRPNLAYEVRKKDSKSIDVMADYIAKRRNDSGVIYCLSRKDCETV 508          
BLAST of mRNA_H-paniculata_contig5414.12859.1 vs. uniprot
Match: A0A4D9D6D9_9STRA (DNA helicase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6D9_9STRA)

HSP 1 Score: 287 bits (735), Expect = 5.660e-86
Identity = 138/230 (60.00%), Postives = 178/230 (77.39%), Query Frame = 0
Query:    4 KDVFVLMPTGGGKSLCYQLPACCCPGLAIVFSPLISLVQDQVSQMLAIGVQAAYVNSEQDYDSEVRVVMDQLYHLNDYGGLKLLYITPEKYCRSPSMTRALQRLHSKGLLSRFVVDEAHCVSDWGHDFRPDYLNLHVLRKEFPDVPIMALTATANQVVRDDTIRRLGMRNPTVRTESFNRPNLTYEIKPKKA------GILDEMAQVVQQFSGQS-GIVYCLSRKDCEKV 226
            +DVFVLMPTGGGKSLCYQLPAC  PG+ +VFSPL+SL+QDQV  +   GV AA + S QDY++E R +MD+LYHL  +G LKLLYITPEK+ RS +M + LQRL  +GLL+RFV+DEAHC+S WGHDFRPDYL L  +R +FP +PIMALTATANQ + +D ++ L M++P +  +SFNRPNLTY+I+PK        G +DE+A+ V++   +S GIVYCLSRKD E++
Sbjct:  504 RDVFVLMPTGGGKSLCYQLPACLTPGITVVFSPLLSLIQDQVEGLRENGVDAAQLTSHQDYETEGREIMDRLYHLPAHGSLKLLYITPEKFARSDAMVKCLQRLKDRGLLARFVIDEAHCISQWGHDFRPDYLMLRSIRDKFPSIPIMALTATANQRLLEDAVKLLKMQSPYIHQQSFNRPNLTYDIRPKSKASPAFLGAIDEIAEYVKKKGPRSSGIVYCLSRKDTERI 733          
BLAST of mRNA_H-paniculata_contig5414.12859.1 vs. uniprot
Match: B8BWN4_THAPS (ATP-dependent DNA helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWN4_THAPS)

HSP 1 Score: 271 bits (693), Expect = 2.230e-85
Identity = 127/226 (56.19%), Postives = 166/226 (73.45%), Query Frame = 0
Query:    1 MRGKDVFVLMPTGGGKSLCYQLPACCCPGLAIVFSPLISLVQDQVSQMLAIGVQAAYVNSEQDYDSEVRVVMDQLYHLNDYGGLKLLYITPEKYCRSPSMTRALQRLHSKGLLSRFVVDEAHCVSDWGHDFRPDYLNLHVLRKEFPDVPIMALTATANQVVRDDTIRRLGMRNPTVRTESFNRPNLTYEIKPKKAGILDEMAQVVQQFSGQSGIVYCLSRKDCEKV 226
            M+G+DVFVLMPTGGGKSLCYQLPA CCPGL+++ SPL+SL++DQV  M  +GV++ ++NS Q ++ E R ++D+L     +GG+KLLYITPEK   S  +   L  L + G +SRFVVDEAHC+SDWGHDFRPDY  L  LR+++P+VP+MALTATAN+ V  D IR LGMRN      SFNRPNL YE++ K    +D +A  + +    SG++YCLSRKDCE +
Sbjct:    1 MKGRDVFVLMPTGGGKSLCYQLPAWCCPGLSVIISPLLSLIEDQVQSMTKLGVRSVFLNSAQSWEDEQRNIVDELRRTPIHGGIKLLYITPEKLAHSNMIKGVLSNLANNGRISRFVVDEAHCLSDWGHDFRPDYNQLGCLRRDYPNVPLMALTATANKKVVSDAIRALGMRNEYSYRSSFNRPNLHYEVRRKDNKTVDTIADYIAERRNDSGVIYCLSRKDCETL 226          
BLAST of mRNA_H-paniculata_contig5414.12859.1 vs. uniprot
Match: A0A1Z5JAK7_FISSO (DNA helicase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAK7_FISSO)

HSP 1 Score: 280 bits (717), Expect = 1.340e-84
Identity = 131/224 (58.48%), Postives = 167/224 (74.55%), Query Frame = 0
Query:    3 GKDVFVLMPTGGGKSLCYQLPACCCPGLAIVFSPLISLVQDQVSQMLAIGVQAAYVNSEQDYDSEVRVVMDQLYHLNDYGGLKLLYITPEKYCRSPSMTRALQRLHSKGLLSRFVVDEAHCVSDWGHDFRPDYLNLHVLRKEFPDVPIMALTATANQVVRDDTIRRLGMRNPTVRTESFNRPNLTYEIKPKKAGILDEMAQVVQQFSGQSGIVYCLSRKDCEKV 226
            G+DVFVLMPTGGGKSLCYQLPA CCPGLA+V SPL+SL+QDQV  M  +G+++ Y+ S QDY+SE   +  ++     +GG+KLLY+TPEK   S  M   L+RLHS+ L+SRFVVDEAHC+SDWGHDFRPDY  L ++R ++P VPIMALTATAN+ V +D IR LGM+N      SFNRPNL YE++ K   +++E+A  +      SG+VYCLSRKDCE +
Sbjct:  439 GRDVFVLMPTGGGKSLCYQLPAWCCPGLAVVISPLLSLIQDQVQSMTKLGIESVYLASSQDYESEQVAITRRINETTAHGGVKLLYLTPEKLSNSTHMQSMLRRLHSRNLISRFVVDEAHCLSDWGHDFRPDYNKLGMIRSQYPGVPIMALTATANEKVVNDAIRALGMQNEYRYVSSFNRPNLRYEVRKKDGKVIEEIADYIAGRPNDSGVVYCLSRKDCENL 662          
BLAST of mRNA_H-paniculata_contig5414.12859.1 vs. uniprot
Match: B7FSW6_PHATC (ATP-dependent DNA helicase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FSW6_PHATC)

HSP 1 Score: 267 bits (682), Expect = 6.860e-84
Identity = 127/226 (56.19%), Postives = 166/226 (73.45%), Query Frame = 0
Query:    1 MRGKDVFVLMPTGGGKSLCYQLPACCCPGLAIVFSPLISLVQDQVSQMLAIGVQAAYVNSEQDYDSEVRVVMDQLYHLNDYGGLKLLYITPEKYCRSPSMTRALQRLHSKGLLSRFVVDEAHCVSDWGHDFRPDYLNLHVLRKEFPDVPIMALTATANQVVRDDTIRRLGMRNPTVRTESFNRPNLTYEIKPKKAGILDEMAQVVQQFSGQSGIVYCLSRKDCEKV 226
            ++G D+FVLMPTGGGKSLCYQLPA CCPGLA+V SPL+SL+QDQV  +  +G++A ++ S QDY +E   +  +L     +GG+KLLYITPEK   S  +   ++RL +K L+SRFVVDEAHC+SDWGHDFRPDY+ L  +R+E+P+VP+MALTATAN+ V +D IR LGM+N      SFNR NL YE++ K    L+ +A  +     +SG+VYCLSRKDCEK 
Sbjct:   26 IQGCDIFVLMPTGGGKSLCYQLPAWCCPGLAVVISPLLSLIQDQVQALTQLGIEAVFLASTQDYQTEQMDITRRLNETTAHGGVKLLYITPEKLNNSTMIQNIIRRLCNKNLISRFVVDEAHCLSDWGHDFRPDYMRLDSVRREYPNVPLMALTATANEKVVNDAIRALGMKNEYRYQSSFNRSNLHYEVRKKDGQTLEVIADYIASRPKESGVVYCLSRKDCEKT 251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5414.12859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR28_ECTSI1.390e-13187.17DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5L064_9PHAE1.480e-11578.60DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A7S1XRC4_9STRA2.080e-9764.35DNA helicase (Fragment) n=1 Tax=Phaeomonas parva T... [more]
A0A7S4SBS1_9STRA5.740e-8957.96DNA helicase n=1 Tax=Ditylum brightwellii TaxID=49... [more]
A0A7S4SEJ9_9STRA8.680e-8957.96DNA helicase n=1 Tax=Ditylum brightwellii TaxID=49... [more]
A0A7S4SBW1_9STRA5.310e-8757.96ATP-dependent DNA helicase n=3 Tax=Ditylum brightw... [more]
A0A4D9D6D9_9STRA5.660e-8660.00DNA helicase n=1 Tax=Nannochloropsis salina CCMP17... [more]
B8BWN4_THAPS2.230e-8556.19ATP-dependent DNA helicase (Fragment) n=1 Tax=Thal... [more]
A0A1Z5JAK7_FISSO1.340e-8458.48DNA helicase n=2 Tax=Fistulifera solaris TaxID=151... [more]
B7FSW6_PHATC6.860e-8456.19ATP-dependent DNA helicase (Fragment) n=1 Tax=Phae... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1..191
e-value: 1.2E-13
score: 61.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..175
score: 18.984
IPR004589DNA helicase, ATP-dependent, RecQ typeTIGRFAMTIGR00614TIGR00614coord: 1..226
e-value: 2.8E-86
score: 288.1
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 2..161
e-value: 9.2E-15
score: 54.8
NoneNo IPR availableGENE3D3.40.50.300coord: 1..182
e-value: 7.9E-72
score: 243.1
NoneNo IPR availableGENE3D3.40.50.300coord: 183..226
e-value: 3.1E-5
score: 25.6
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 1..226
NoneNo IPR availablePANTHERPTHR13710:SF128ATP-DEPENDENT DNA HELICASE Q-LIKE 4Acoord: 1..226
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..226
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 114..123
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5414contigH-paniculata_contig5414:1962..13810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5414.12859.1mRNA_H-paniculata_contig5414.12859.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5414 1962..13816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5414.12859.1 ID=prot_H-paniculata_contig5414.12859.1|Name=mRNA_H-paniculata_contig5414.12859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=227bp
MRGKDVFVLMPTGGGKSLCYQLPACCCPGLAIVFSPLISLVQDQVSQMLA
IGVQAAYVNSEQDYDSEVRVVMDQLYHLNDYGGLKLLYITPEKYCRSPSM
TRALQRLHSKGLLSRFVVDEAHCVSDWGHDFRPDYLNLHVLRKEFPDVPI
MALTATANQVVRDDTIRRLGMRNPTVRTESFNRPNLTYEIKPKKAGILDE
MAQVVQQFSGQSGIVYCLSRKDCEKV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR004589DNA_helicase_ATP-dep_RecQ
IPR011545DEAD/DEAH_box_helicase_dom
IPR002464DNA/RNA_helicase_DEAH_CS
IPR027417P-loop_NTPase