prot_H-paniculata_contig5411.12855.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5411.12855.1
Unique Nameprot_H-paniculata_contig5411.12855.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length47
Homology
BLAST of mRNA_H-paniculata_contig5411.12855.1 vs. uniprot
Match: D8LHJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ0_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 5.450e-19
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLASFSIGRTTASLADVGGDTTVITPVVDG 46
            MF+KFGVPAEFMSKDAVLA FSIGRTTASL DVGGD  V+TPV DG
Sbjct:    7 MFDKFGVPAEFMSKDAVLACFSIGRTTASLVDVGGDIAVVTPVYDG 52          
BLAST of mRNA_H-paniculata_contig5411.12855.1 vs. uniprot
Match: D8LHI8_ECTSI (Protein binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHI8_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 4.640e-17
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLASFSIGRTTASLADVGGDTTVITPVVDG 46
            MFEKFGVPAEFMSKDAVLA FSIGRTTASL DVGGD+ V+TPV DG
Sbjct:  177 MFEKFGVPAEFMSKDAVLACFSIGRTTASLVDVGGDSAVVTPVYDG 222          
BLAST of mRNA_H-paniculata_contig5411.12855.1 vs. uniprot
Match: A0A6H5KHN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN4_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 3.340e-14
Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLASFSIGRTTASLADVGGDTTVITPVVDG 46
            MFE+FGVPAEF+SKD VL  FSIGRTTASL DVGGD+ V TPV DG
Sbjct:  233 MFEEFGVPAEFVSKDGVLPCFSIGRTTASLVDVGGDSAVATPVFDG 278          
BLAST of mRNA_H-paniculata_contig5411.12855.1 vs. uniprot
Match: D8LHJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ1_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 3.190e-12
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    3 EKFGVPAEFMSKDAVLASFSIGRTTASLADVGGDT 37
            E+FGVPAEFMSKDAVLA FSIGRTTASL DVGG T
Sbjct:    9 EEFGVPAEFMSKDAVLACFSIGRTTASLVDVGGGT 43          
BLAST of mRNA_H-paniculata_contig5411.12855.1 vs. uniprot
Match: A0A7S3HMC5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMC5_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 4.360e-9
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLASFSIGRTTASLADVGGDTTVITPVVDG 46
            MFEK+ VPA F+SKDAVLAS++ G+T   + DVG   TV+TPV DG
Sbjct:   54 MFEKYSVPAFFLSKDAVLASYACGKTGGLVIDVGASGTVVTPVQDG 99          
BLAST of mRNA_H-paniculata_contig5411.12855.1 vs. uniprot
Match: A0A7S3UN21_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UN21_HETAK)

HSP 1 Score: 57.4 bits (137), Expect = 2.060e-8
Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    2 FEKFGVPAEFMSKDAVLASFSIGRTTASLADVGGDTTVITPVVDG 46
            FEK+ VPA F+SKDAVL+ F+ GRTT  +ADVG +   +TPV DG
Sbjct:  102 FEKYDVPALFISKDAVLSCFAAGRTTGLVADVGAELATVTPVSDG 146          
BLAST of mRNA_H-paniculata_contig5411.12855.1 vs. uniprot
Match: A0A7S0VUY7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VUY7_9CRYP)

HSP 1 Score: 56.6 bits (135), Expect = 3.670e-8
Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLASFSIGRTTASLADVGGDTTVITPVVDG 46
            MFEK+ VPA F+SK+AVL++FS GR+TA + D GG +T ++PV DG
Sbjct:   38 MFEKYKVPAVFVSKNAVLSAFSCGRSTAVVLDSGGGSTCVSPVHDG 83          
BLAST of mRNA_H-paniculata_contig5411.12855.1 vs. uniprot
Match: D8R5L0_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R5L0_SELML)

HSP 1 Score: 55.8 bits (133), Expect = 8.120e-8
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLASFSIGRTTASLADVGGDTTVITPVVDG 46
            MFEK+GVPA F++K+AVL SF+ GR T+ +AD GG +T +  V DG
Sbjct:  120 MFEKYGVPAVFLAKNAVLTSFASGRATSLVADCGGGSTTVAAVHDG 165          
BLAST of mRNA_H-paniculata_contig5411.12855.1 vs. uniprot
Match: D8LII8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LII8_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 2.080e-7
Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLASFSIGRTTASLADVGGDTTVITPVVDG 46
            MFEKFGVPA F +K+A+L++FS GR TA + D G   T   PVVDG
Sbjct:  178 MFEKFGVPAMFPAKNAMLSAFSAGRATALVCDCGHGATSAVPVVDG 223          
BLAST of mRNA_H-paniculata_contig5411.12855.1 vs. uniprot
Match: J9FLI3_9SPIT (Actin-related protein 4 n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9FLI3_9SPIT)

HSP 1 Score: 53.9 bits (128), Expect = 3.900e-7
Identity = 28/46 (60.87%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLASFSIGRTTASLADVGGDTTVITPVVDG 46
            MFEK+ VPA F+ K  VLASFS GR+TA + D G  TT  TPV DG
Sbjct:  137 MFEKYQVPAIFIGKAPVLASFSCGRSTAIIVDSGSKTTYATPVHDG 182          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5411.12855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHJ0_ECTSI5.450e-1984.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHI8_ECTSI4.640e-1786.96Protein binding protein, putative n=2 Tax=Ectocarp... [more]
A0A6H5KHN4_9PHAE3.340e-1478.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHJ1_ECTSI3.190e-1288.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3HMC5_9STRA4.360e-960.87Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S3UN21_HETAK2.060e-860.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0VUY7_9CRYP3.670e-858.70Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
D8R5L0_SELML8.120e-856.52Uncharacterized protein n=3 Tax=Selaginella moelle... [more]
D8LII8_ECTSI2.080e-758.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
J9FLI3_9SPIT3.900e-760.87Actin-related protein 4 n=1 Tax=Oxytricha trifalla... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familyPFAMPF00022Actincoord: 1..46
e-value: 1.3E-11
score: 43.8
NoneNo IPR availableGENE3D3.30.420.40coord: 18..46
e-value: 2.2E-11
score: 45.2
NoneNo IPR availableGENE3D3.30.420.40coord: 1..17
e-value: 2.2E-11
score: 45.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5411contigH-paniculata_contig5411:6899..7039 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5411.12855.1mRNA_H-paniculata_contig5411.12855.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5411 6887..7039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5411.12855.1 ID=prot_H-paniculata_contig5411.12855.1|Name=mRNA_H-paniculata_contig5411.12855.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=47bp
MFEKFGVPAEFMSKDAVLASFSIGRTTASLADVGGDTTVITPVVDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin