prot_H-paniculata_contig5406.12846.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5406.12846.1
Unique Nameprot_H-paniculata_contig5406.12846.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length252
Homology
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BLAST of mRNA_H-paniculata_contig5406.12846.1 vs. uniprot
Match: D8LK26_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 1.660e-87
Identity = 201/240 (83.75%), Postives = 212/240 (88.33%), Query Frame = 0 
Query:   12 ISMADAAPMLSSSP-SGQPGSAFQEGDTAFDQKGATASRGXXXXXXXXXXRKTGSTKGSRPSKPRPGGVHAHVAAYEGDLQKLRRYCEAGGDLEKRDSYQATPLLLAAEKGHEACVSFLLDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKETESKLGVDVIEAVERNDVAGVKSFIAGKGDLNQTGKNDMTPLHVASFNGRTDIV 250
            +SMADAAPMLS++P SGQ GSAFQ+GD  FD  GA A             RK GS++  R SKPRPGGVHAHVAAYEGDL KLRRY EAGGDLEKRDSY+ATPLLLAAEKGHEACV++LLD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKETESKLGVDVIEAVERNDVAG+KSFI+GKGDLNQ GKNDMTPLHVASFNGRTDIV
Sbjct:    1 MSMADAAPMLSATPRSGQLGSAFQDGDGGFDTTGAGARAAGGSGSSSS--RKPGSSRTGR-SKPRPGGVHAHVAAYEGDLGKLRRYSEAGGDLEKRDSYRATPLLLAAEKGHEACVAYLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKETESKLGVDVIEAVERNDVAGLKSFISGKGDLNQKGKNDMTPLHVASFNGRTDIV 237
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BLAST of mRNA_H-paniculata_contig5406.12846.1 vs. uniprot
Match: D8LK98_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK98_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 3.510e-7
Identity = 92/193 (47.67%), Postives = 113/193 (58.55%), Query Frame = 0 
Query:   79 VHAHVAAYEGDLQKLRRYCEAGGDLEKRDSYQATPLLLAAEKGHEACVSFLLDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKETESKLG--VDVIEAVERNDVAGVKSFIAGKGD-------------------LNQTGKNDMTPLHVASFNGRTDIV 250
            +H H AAY G    L+ Y   GGDLE RD +QAT L+L AE+GH   V  L   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LA+   I  +L  ++     G   D++ AVE ND   V +FIA   +                   LN+TG+  M+ +H+A+F+G  D +
Sbjct:  817 IHVHTAAYNGKQDVLKAYISQGGDLEIRDQFQATALMLCAERGHTQMVDDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLATDPAIRRILRIEQMVRFSGENFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAVASKRLRLNRTGRGGMSAVHLAAFHGYADSL 1009
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5406.12846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LK26_ECTSI1.660e-8783.75Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26... [more]
D8LK98_ECTSI3.510e-747.67Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 109..138
e-value: 1.1E-4
score: 31.6
coord: 142..171
e-value: 9.9E-5
score: 31.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 109..141
score: 12.155
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 142..174
score: 13.277
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 54..190
e-value: 7.2E-33
score: 115.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 191..251
e-value: 1.0E-7
score: 33.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 81..250
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 82..170
e-value: 7.4E-13
score: 48.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 76..251
score: 30.953
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 207..250
coord: 72..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5406contigH-paniculata_contig5406:257..9409 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5406.12846.1mRNA_H-paniculata_contig5406.12846.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5406 257..9409 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5406.12846.1 ID=prot_H-paniculata_contig5406.12846.1|Name=mRNA_H-paniculata_contig5406.12846.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp
MASNRKDLTRAISMADAAPMLSSSPSGQPGSAFQEGDTAFDQKGATASRG
GGGGGSSSSSRKTGSTKGSRPSKPRPGGVHAHVAAYEGDLQKLRRYCEAG
GDLEKRDSYQATPLLLAAEKGHEACVSFLLDNGADITATDEHDYTALHLA
AYYGRVAVVALLLSRGANTSAVDDRGRIPKRLASRKEISNLLAAKETESK
LGVDVIEAVERNDVAGVKSFIAGKGDLNQTGKNDMTPLHVASFNGRTDIV
G*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom