prot_H-paniculata_contig5405.12845.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5405.12845.1
Unique Nameprot_H-paniculata_contig5405.12845.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length653
Homology
BLAST of mRNA_H-paniculata_contig5405.12845.1 vs. uniprot
Match: A0A6H5L805_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L805_9PHAE)

HSP 1 Score: 464 bits (1195), Expect = 4.880e-151
Identity = 334/775 (43.10%), Postives = 386/775 (49.81%), Query Frame = 0
Query:    1 MALVDTQGFVMAVDRSLFGPQGRRWIERKLPEVATNIAFVAVSAFGASLLVFHVCQDFSVRGYWAILQAPKYLVNAIFVHLVARGLRWHIDRMLGRSFLQEDEALPDFLGGTRWGGDG----------------------------------------------DGDRSNSDRG-LDRSR-GIDGVAGIG----------------------------------------NSLHRTSKSAENVNLVPSDTRASQEGDGGQGGERENPLLAAGAAAAASAVADGPNADMRVLLDDVHPSDRSRKNSNDHHLETSSQKGNDKQRAHGRRNGQDRGGGPGFPDLFAACRPHSHS---------NSPDPSPIRTTEPPSSDPSRRHRHRCLPFGNTGDSVG--------PGGAPIRAVRNGGERREADEEGRGGSVEG--KSVGSVSDDGGAGGHGAGSRGSRRRFQALTL---------------NTTAGTKDGEWQRVRRQRRGEGGVGQKEEKRGASLVGRTKTTGGDRGHRLEGISMATTLTKRP------PPKSGGSWRSIDTISRALHVGSSSRRHAQRLVGGDRAS----EHHQLNFFTESDLDDLLHSTFFIKMCDDASWLYVEDHPHQPEWNWLLPLWGGYRIAPKFQGEVKKHEAHRMLFQCETGRHKDHVRIRSRATNTFLFFLGVKQPLTWVAWDRDVVGGDWEDVKLEWVGKPTGPDGVLMGDERGRVIIRSRPMNGYVSWNGSRFSHVPSREGAAVFTFQRMAPS 643
            MALVDTQGFVMAVDRSLFGPQGRRWIERKLP VATN+AFVAVSAFGA LLVFH+ +++   GYWAILQ PK+++NA+ +HLVAR LRWHIDRMLG +F   DEALPDF G T   G+G                                               G R + +   +D+ + G  G                                             +SL R++ S      +P   R   E  G +   R +  L            DG       L D    SD+ R  +    L+           + G R          FPDLF ACRP  H          +SP  SP  T E  S+ PS   R+R         S          P  A  R V  GG      E+ R    +G  +  G  SDDGGA                                     A    G    V      E G G  EEK G    G  KT+               + + R          S   WRSID +SRAL    S+RR   R  G  R         ++NFFTE DLD+LLHSTFFIKMCDDASWLYVEDHP QPE NWLL LWGGY+IAP+FQGEVK++EAHRMLFQ E GRH+DHVRIRSRATNTFLFFLG+KQPLTWVAWDRDVVGG+WED+KLEWVGKP GPDGVL+GDERGRV+IRSRPM GYVSWNGSRF+HVP REGA VF  QRMAPS
Sbjct:    1 MALVDTQGFVMAVDRSLFGPQGRRWIERKLPNVATNLAFVAVSAFGACLLVFHITREYYTSGYWAILQTPKHILNAVVLHLVARALRWHIDRMLGVNFAAGDEALPDFFGSTTLDGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPPQPKQGRRDSVEESTIDQEQFGWSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLGRSASSLS----LPESARPGWE-QGRRSWRRSSNRL------------DGSG-----LADGFAGSDKERGENAAGALDDXXXXXXXXNHSRGDREKHT------FPDLFGACRPSHHERHRRRERSLSSPPSSPSATLE--STRPSSVGRNRXXXXXXXXPSPRRRRLSLEVPRTAADRWVDEGGNYGAGKEQRRAAGADGAARQSGCASDDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPQVGASAAAGAAGEV------EAGKGDVEEKEGGGRNG-AKTSVAXXXXXXXXXXTGLSGSWRDGXXXXXXXXSNSRWRSIDKLSRAL---GSTRRRTSRQGGAARGEGGEGSEQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRDHVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRMAPS 735          
BLAST of mRNA_H-paniculata_contig5405.12845.1 vs. uniprot
Match: D8LSC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC8_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 4.630e-58
Identity = 103/142 (72.54%), Postives = 114/142 (80.28%), Query Frame = 0
Query:  431 WRSIDTISRALHVGSSSRRHAQRLVGGDRAS----EHHQLNFFTESDLDDLLHSTFFIKMCDDASWLYVEDHPHQPEWNWLLPLWGGYRIAPKFQGEVKKHEAHRMLFQCETGRHKDHVRIRSRATNTFLFFLGVKQPLTWV 568
            WRSID +SRAL    S+RR   R  G  R         ++NFFTE DLD+LLHSTFFIKMCDDASWLYVEDHP QPE NWLL LWGGY+IAP+FQGEVK++EAHRMLFQ E GRH+ HVRIRSRATNTFLFFLG+KQPLTWV
Sbjct:  321 WRSIDKLSRAL---GSTRRRTSRQGGAARGEGGEGSEQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWV 459          
BLAST of mRNA_H-paniculata_contig5405.12845.1 vs. uniprot
Match: A0A835ZHV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV2_9STRA)

HSP 1 Score: 194 bits (492), Expect = 7.880e-51
Identity = 187/650 (28.77%), Postives = 277/650 (42.62%), Query Frame = 0
Query:    1 MALVDTQGFVMAVDRSLFGPQGRRWIERKLPEVATNIAFVAVSAFGASLLVFHVCQDFSVRGYWAILQA-PKYLVNAIFVHLVARGLRWHIDRMLGRSFLQEDEALPDFLGGTRWGGDGDGDRSNSDRGLDRSRGIDGVAGIGNSLHRTSKSAENVNLVPSDTRASQEGDGGQGGERENPLLAAGAAAAASAVADGPNADMRVLLDDVHPSDRSRKNSNDHHLETSSQKGNDKQRA--HGRRNGQDRGGGPGFPDLFAACRPHSHSNSPDPSPIRTTEPPSSDPSRRHRHRCLPFGNTGDSVGPGGAPIRAVRNGGERREADEEGRGGSVEGKSVGSVSDDGGAGGHGAGSRGSRRRFQALTLNTTAGTKDGEWQRVRRQRRGEGGVGQKEEKRGASLVGRTKTTGGDRGHRLEGISMATTLTKRPPPKSGGSWRSIDTISRALHVGSSSRRHAQRLVGGDRASEHHQLNF----FTESDLDDLLHSTFFIKMCDDASWLYVEDHPHQPE----WNWLLPLWG-GYRIAPKFQGEVKKHEAHRMLFQCETGRHKDHVRIRSRATNTFLFFLGVKQPLTWVAWDRDVVGGDWEDVKLEWVGKPTGPDGVLMGDERGRVIIRSRPMNGYVSWNGSRFSHVPSREGAAVFTFQ 638
            MALVD     +AVDRSLFGPQGRRWIERKLPEV +N+ F+ VS FGA LL+F +C D+   G+   L   PK++  A  VHL+A+ LRWHI +++  SF+ +D   P+ +  TRW                    +   A   +   + + +             +     G+G  R  P  +  +        D P    R          RS   S D    T+++   D  RA  + R++       P  P    A    S++   +P+P+ +T    S  +++ R               G +P+R  + G   R A+                   GGA                   +  A  + G+                        LV  T+      G     +       + P P    S     T++ A       RR  +R  G +R      L+     FT +   +L+ S FF+++ DD SW+YVE   +QP+      W + L+  GY++  ++ G+V  H+A+RMLFQCE GR   HV +RSR TNT LF LG+++P T VAWDR+V GGDWED+++EW             +  G V+I  +   GY+ W G RF HV  R+ A+ F  Q
Sbjct:    1 MALVDINPLTVAVDRSLFGPQGRRWIERKLPEVTSNMTFIMVSGFGACLLMFGICTDYQRFGFVGGLGCLPKHIAAATLVHLLAKLLRWHITQVVQGSFMPDDR--PNLV--TRWA-------------------VAAAAATRDYARQHTPAGGGXXXXXXXXEGATTRITGRGSARAPPA-STNSLTIIHGTYDSPYRRTRQ---------RSGSASTDADAPTTAE---DAPRAFIYSRKSKIVDASAP--PQPLTAALDESYT---EPAPLDSTRDGGSTSAQQRRG--------------GLSPLRGEQGGETPRSAE-------------------GGA------------------FDEPAAVRPGD------------------------LV--TEVVSEAPGAPQAALDPQAEHHRAPKPPVADS----PTLATA-------RRRRRRHGGIERGRSEGGLDLQPYLFTRATAHELMDSLFFMRVVDDDSWVYVEHDLYQPQEGAGLGWAMNLFHRGYKVGVRYAGDVDPHDANRMLFQCEPGRASGHVWLRSRGTNTLLFMLGLRKPRTLVAWDREVPGGDWEDMRIEWC-----------PEHNGHVVISCKRAGGYLQWTGDRFGHVDERDCASRFMLQ 510          
BLAST of mRNA_H-paniculata_contig5405.12845.1 vs. uniprot
Match: A0A835YVS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS8_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.060e-38
Identity = 76/178 (42.70%), Postives = 114/178 (64.04%), Query Frame = 0
Query:  469 FTESDLDDLLHSTFFIKMCDD-ASWLYVEDHPHQPE----WNWLLPLWG-GYRIAPKFQGEVKKHEAHRMLFQCETGRHKDHVRIRSRATNTFLFFLGVKQPLTWVAWDRDVVGGDWEDVKLEWVGKPTGPDGVLMGDERGRVIIRSRPMNGYVSWNGSRFSHVPSREGAAVFTFQRM 640
            FT     +LL S FFIK+ D+  +W++VED  H+        W + L+  GYR+  ++ G+V  H+AHR++FQCE GR   HVRIRSR +NT+LF LG+++PLT VAWDR+V GGDWED+++ W+ +          ++ GRV+IR +   GY+ W G++F H P ++ A+ F  Q +
Sbjct:  432 FTAETAHELLDSMFFIKLVDEEGAWMFVEDDLHESREGGGLGWAMSLFHRGYRVGARYAGDVGPHDAHRLVFQCEPGRAAGHVRIRSRGSNTYLFMLGLRRPLTLVAWDREVAGGDWEDMRIVWLPR---------AEDEGRVLIRCKTAGGYLQWTGTKFVHTPVKDSASRFMLQSL 600          
BLAST of mRNA_H-paniculata_contig5405.12845.1 vs. uniprot
Match: D8LSC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC9_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 2.050e-12
Identity = 30/59 (50.85%), Postives = 43/59 (72.88%), Query Frame = 0
Query:   47 ASLLVFHVCQDFSVRGYWAILQAPKYLVNAIFVHLVARGLRWHIDRMLGRSFLQEDEAL 105
            +S+    + +++   GYWAILQ PK+++NA+ +HLVAR LRWHIDRMLG +F   DE +
Sbjct:    2 SSIASSQITREYYKSGYWAILQTPKHILNAVVLHLVARALRWHIDRMLGVNFAAGDEGM 60          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5405.12845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L805_9PHAE4.880e-15143.10Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LSC8_ECTSI4.630e-5872.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZHV2_9STRA7.880e-5128.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVS8_9STRA1.060e-3842.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LSC9_ECTSI2.050e-1250.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..653
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..71
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..52
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5405contigH-paniculata_contig5405:7377..11665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5405.12845.1mRNA_H-paniculata_contig5405.12845.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5405 7377..11665 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5405.12845.1 ID=prot_H-paniculata_contig5405.12845.1|Name=mRNA_H-paniculata_contig5405.12845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=653bp
MALVDTQGFVMAVDRSLFGPQGRRWIERKLPEVATNIAFVAVSAFGASLL
VFHVCQDFSVRGYWAILQAPKYLVNAIFVHLVARGLRWHIDRMLGRSFLQ
EDEALPDFLGGTRWGGDGDGDRSNSDRGLDRSRGIDGVAGIGNSLHRTSK
SAENVNLVPSDTRASQEGDGGQGGERENPLLAAGAAAAASAVADGPNADM
RVLLDDVHPSDRSRKNSNDHHLETSSQKGNDKQRAHGRRNGQDRGGGPGF
PDLFAACRPHSHSNSPDPSPIRTTEPPSSDPSRRHRHRCLPFGNTGDSVG
PGGAPIRAVRNGGERREADEEGRGGSVEGKSVGSVSDDGGAGGHGAGSRG
SRRRFQALTLNTTAGTKDGEWQRVRRQRRGEGGVGQKEEKRGASLVGRTK
TTGGDRGHRLEGISMATTLTKRPPPKSGGSWRSIDTISRALHVGSSSRRH
AQRLVGGDRASEHHQLNFFTESDLDDLLHSTFFIKMCDDASWLYVEDHPH
QPEWNWLLPLWGGYRIAPKFQGEVKKHEAHRMLFQCETGRHKDHVRIRSR
ATNTFLFFLGVKQPLTWVAWDRDVVGGDWEDVKLEWVGKPTGPDGVLMGD
ERGRVIIRSRPMNGYVSWNGSRFSHVPSREGAAVFTFQRMAPSLGIGGSG
ALR
back to top