prot_H-paniculata_contig5403.12842.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5403.12842.1
Unique Nameprot_H-paniculata_contig5403.12842.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length514
Homology
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BLAST of mRNA_H-paniculata_contig5403.12842.1 vs. uniprot
Match: A0A6H5K0I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I6_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 2.950e-28
Identity = 91/165 (55.15%), Postives = 109/165 (66.06%), Query Frame = 0 
Query:    1 MIGVLKA---WRHSRREDGRVVKQDGGDDGDGDGSV-FVPAETALLQVLAGQAAAALTRLDAEVSQKE--------------GQKDEREAEVKEEVQRLREAMEHLSGSAQGLARQRDDARAALAKAKAILRRMGPALRDVRDRQLGFRHYHDLIVRMSKSVLDN 147
            M+GVLKA   W  + RE     +Q  GD+G       F   E A L V+AGQAAAAL R+ A  S++E               +  +RE  VKEE++ LREAMEHLSGSA+GLARQRD+ARAALA+AK  LRRM PALR+ RDRQLGFRHYHDLIV MSK+VL +
Sbjct: 1077 MMGVLKASESWLLAWRE-----QQHRGDEGHRPPDKGFSGGEMAALAVVAGQAAAALRRVGAAASEREEVLQELDAXXADRVDETQKREEAVKEEMKHLREAMEHLSGSAKGLARQRDEARAALARAKGTLRRMVPALREARDRQLGFRHYHDLIVNMSKNVLQD 1236
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BLAST of mRNA_H-paniculata_contig5403.12842.1 vs. uniprot
Match: D7FQ01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ01_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 1.360e-26
Identity = 78/128 (60.94%), Postives = 92/128 (71.88%), Query Frame = 0 
Query:   34 FVPAETALLQVLAGQAAAALTRLDAEVSQKEGQKDE--------------REAEVKEEVQRLREAMEHLSGSAQGLARQRDDARAALAKAKAILRRMGPALRDVRDRQLGFRHYHDLIVRMSKSVLDN 147
            F   E A L V+AGQAAAAL R+ A  S++E   +E              RE  VKEE++ LREAMEH+SGSA+GLARQRD+ARAALA+AK  LRRM PALR+ RDRQLGFRHYHDLIV MSK+VL +
Sbjct:  591 FSGREMAALAVVAGQAAAALRRVGAAASEREEVLEELDAXXADRVDETQKREEAVKEEMKHLREAMEHVSGSAKGLARQRDEARAALARAKGTLRRMVPALREARDRQLGFRHYHDLIVNMSKNVLQD 718
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5403.12842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0I6_9PHAE2.950e-2855.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ01_ECTSI1.360e-2660.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 53..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5403contigH-paniculata_contig5403:8773..12684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5403.12842.1mRNA_H-paniculata_contig5403.12842.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5403 8741..13546 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5403.12842.1 ID=prot_H-paniculata_contig5403.12842.1|Name=mRNA_H-paniculata_contig5403.12842.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=514bp
MIGVLKAWRHSRREDGRVVKQDGGDDGDGDGSVFVPAETALLQVLAGQAA
AALTRLDAEVSQKEGQKDEREAEVKEEVQRLREAMEHLSGSAQGLARQRD
DARAALAKAKAILRRMGPALRDVRDRQLGFRHYHDLIVRMSKSVLDNDND
QDQDHGENAIGLNGPSRSSSPPLFANSTADGASWRLGGTGASGSDWRLSV
FGSAGGGYGASSSGLMFMDKSRHGRNHHHNHSSINNNNNEKRSMAEVRDQ
VTAAAANLSRENSGAAINSRSSTTVPAGASSSRRGRVADGGEEGRSFGKK
LYNTAYDTSTNTAALSTLHPASSVSLPRPPVRHNNNNNNNNNNSSNNNSN
SSSNSSSSSSVVGAARPLEKNDHPRRGGLRRAGGGSSSSDVWGGRGMEAQ
ISSSRPGLRFQDLASRDEAANNTPGISSEDDAWKTTAPLGGGGESPLGEK
SEMGVSSLAKGVATGPRINRVVDVSGEGGGSPEILRVLREAVGGGVDGAR
GRSRGRRTWDSRR*
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