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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 836 |
| Cds size | 831 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5403.12841.1 >prot_H-paniculata_contig5403.12841.1 ID=prot_H-paniculata_contig5403.12841.1|Name=mRNA_H-paniculata_contig5403.12841.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp
MEDDGGEDMLLQALAGVSQEMAVAFALASSVRRVFDLVEAFVPRATPLAR
GRLFLLSGEPGRELYCLESNPSAPESQAVDFTFPAGAGLVARCLSTCLPC
QTRDPPPAAPSSPPCSAARRRRPTTNTNKPNNNVIVPYAPPLSGAADLHG
VFLAAADTAAPPNTYGNNHYGNSNATGFLPSNTAVNTNNLVSRSRSNSNS
NNDGGGRRGRSSRSPSPSRPASSGLFSPSSRRRHGLGWSEPSSPTAAAAT
VGGRSGGDARDYNRGVGSGGGAARWWR back to topmRNA from alignment at H-paniculata_contig5403:6473..8649+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5403.12841.1 ID=mRNA_H-paniculata_contig5403.12841.1|Name=mRNA_H-paniculata_contig5403.12841.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2177bp|location=Sequence derived from alignment at H-paniculata_contig5403:6473..8649+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAGGATGGAGGATGATGGAGGGGAGGATATGTTGTTGCAGGCATTGGCT
GGGGTTTCCCAGGAGATGGCTGTGGCGTTTGCCTTAGCTAGTTCGGTGAG
GAAGTAGGAGGCTATCCGTGGGGGGGGGCGAGGCGGTGTGAGGGATTCCA
ATAGTGCTGAGTGACTGAATCCACCGAAAGATCGAATTAATGAGGGCTCG
AAATGAACAATATTCTAAAGATAATACAGTACGGTTTGCAGCACGAGTTG
ACTGTGGCTCACATCAAATGTGTATAACAAGAATCGGTTTTTGGCTCTAG
AGCTCTATACTAGTGTATATGTTGCAAGGGCGCGAGCAGGAGGGGGAGGT
GAAGGGCGAGGGGGGTCGTGGTGGAGGTGAAGCAGAATTTAGTTCTTAAA
AAACGAGAGTCGAACTAGTGTTCGTTGGACTAAACTTTTATTACAGATTC
TTTTAAACGTATTCGTGGATTTGCAGTACTTGGTTTTATGGTGGTTTACT
CTTCGACCCCTCCACGAATCTGGCTCCAGGGTTGTTGCCACGCTGCGGAG
CGATGGAGCGTTCCGGCGATTGTTGTACGCTTACGGGGCCCGATTTGACA
TGCTAAATGCTAGGGGTAAGGGTTAAGATTAGGGGTAGGATGGGGTTCGC
AGATCTACCCGGCACGCAAATTCGCCAAAATAGACCAACCACAAAACGGC
ACAACGACGGGTACTGTAAGACAAAGTGGGGTGAAAAACAGACGTGACTA
GACCTCGTCTATTGGCACGATTCATCAGCAGCAATGATCCCGACGTTGAG
AACAAGTATAGCAAAAACATCCCCGCCCGAAAAACAATTACCACTCTCTT
GTTTGTTTGTTTGTTTGCTGATATGATCCCCAAACAGGTTCGCCGAGTGT
TTGATCTGGTGGAGGCATTTGTGCCAAGGGCAACTCCGCTCGCACGAGGA
CGCTTGTTCTTGCTAAGCGGCGAGCCGGGTAGAGAGCTCTATTGTCTCGA
ATCCAATCCCTCGGTGAGAGGTCGACGAACGTTGCGCTTGTTTGGGCTTG
CGATTTTTCTCAGCGGAGGCAGGGACGCGTGGGAGAACTCTCCCTTTGTT
TTTTGTGTTGTTTTCTCTTTGCTGACTACCAAGTGAAAGCTGCATGTAAA
TATCTCTAGATAGTTTAGATACAAGGGGGATATGTTATAACAAGCGTGCA
GTTTCGGTTTCAGCTTGGCACGTACATTTTGTCTCTTATGTAGCCAGCCT
GAGATCGCGTTTCCCTTGTTTTCTCCAGGTAATGACCCGATCCCCTGCAC
TTTTAAGTGGTAATTCGGACACACAGGATATATTGCTCCAGGAAACGACT
CAGAGCACAGCAACAAACGTTCTTTCAAGCCTGATCAGCGCTCAGCGGTC
TGCCCATTAGCTCCTTACAACAACCACTGCACACCCCACACCCCACACCC
CACACCCCACACTCATCTATTGTTCTTCCACGTTTATCTACGACAACACA
TAACCCTCCCACTCCTTTCACGCTCCCTCGATTAACATCATCCATAAATA
ATTTCTCGCCAGGCCCCCGAGAGCCAAGCAGTGGACTTCACGTTCCCAGC
TGGCGCAGGCTTGGTGGCCCGTTGCCTGTCGACCTGCCTCCCTTGCCAAA
CCCGGGATCCCCCCCCCGCGGCACCCTCATCCCCTCCTTGTAGTGCCGCC
CGCCGCCGCCGCCCCACCACCAACACCAACAAGCCCAACAACAATGTGAT
AGTACCTTACGCTCCACCTCTCTCGGGCGCCGCCGACCTCCACGGCGTAT
TTTTAGCCGCCGCCGACACCGCCGCCCCCCCCAACACATATGGCAACAAC
CACTATGGAAACTCCAATGCGACTGGATTTTTGCCATCGAACACCGCTGT
GAACACCAACAACTTGGTCAGCAGAAGCAGAAGCAACAGCAACAGCAACA
ATGACGGGGGGGGGCGCAGAGGACGCTCTTCGCGGTCCCCGTCACCTTCC
AGGCCGGCATCGTCGGGTCTGTTCTCTCCTTCTTCTCGGCGCCGGCATGG
ATTGGGGTGGTCCGAGCCCTCCTCCCCGACGGCTGCCGCGGCGACGGTTG
GAGGCCGGAGTGGAGGGGACGCGAGGGATTATAATCGGGGCGTGGGCAGC
GGCGGTGGTGCTGCGCGGTGGTGGAGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5403:6473..8649+ >mRNA_H-paniculata_contig5403.12841.1 ID=mRNA_H-paniculata_contig5403.12841.1|Name=mRNA_H-paniculata_contig5403.12841.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at H-paniculata_contig5403:6473..8649+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGATGATGGAGGGGAGGATATGTTGTTGCAGGCATTGGCTGGGGT
TTCCCAGGAGATGGCTGTGGCGTTTGCCTTAGCTAGTTCGATGGAGGATG
ATGGAGGGGAGGATATGTTGTTGCAGGCATTGGCTGGGGTTTCCCAGGAG
ATGGCTGTGGCGTTTGCCTTAGCTAGTTCGGTTCGCCGAGTGTTTGATCT
GGTGGAGGCATTTGTGCCAAGGGCAACTCCGCTCGCACGAGGACGCTTGT
TCTTGCTAAGCGGCGAGCCGGGTAGAGAGCTCTATTGTCTCGAATCCAAT
CCCTCGGTTCGCCGAGTGTTTGATCTGGTGGAGGCATTTGTGCCAAGGGC
AACTCCGCTCGCACGAGGACGCTTGTTCTTGCTAAGCGGCGAGCCGGGTA
GAGAGCTCTATTGTCTCGAATCCAATCCCTCGGCCCCCGAGAGCCAAGCA
GTGGACTTCACGTTCCCAGCTGGCGCAGGCTTGGTGGCCCGTTGCCTGTC
GACCTGCCTCCCTTGCCAAACCCGGGATCCCCCCCCCGCGGCACCCTCAT
CCCCTCCTTGTAGTGCCGCCCGCCGCCGCCGCCCCACCACCAACACCAAC
AAGCCCAACAACAATGTGATAGTACCTTACGCTCCACCTCTCTCGGGCGC
CGCCGACCTCCACGGCGTATTTTTAGCCGCCGCCGACACCGCCGCCCCCC
CCAACACATATGGCAACAACCACTATGGAAACTCCAATGCGACTGGATTT
TTGCCATCGAACACCGCTGTGAACACCAACAACTTGGTCAGCAGAAGCAG
AAGCAACAGCAACAGCAACAATGACGGGGGGGGGCGCAGAGGACGCTCTT
CGCGGTCCCCGTCACCTTCCAGGCCGGCATCGTCGGGTCTGTTCTCTCCT
TCTTCTCGGCGCCGGCATGGATTGGGGTGGTCCGAGCCCTCCTCCCCGAC
GGCTGCCGCGGCGACGGTTGGAGGCCGGAGTGGAGGGGACGCGAGGGATT
ATAATCGGGGCGTGGGCAGCGGCGGTGGTGCTGCGCGGTGGTGGAGGGCC
CCCGAGAGCCAAGCAGTGGACTTCACGTTCCCAGCTGGCGCAGGCTTGGT
GGCCCGTTGCCTGTCGACCTGCCTCCCTTGCCAAACCCGGGATCCCCCCC
CCGCGGCACCCTCATCCCCTCCTTGTAGTGCCGCCCGCCGCCGCCGCCCC
ACCACCAACACCAACAAGCCCAACAACAATGTGATAGTACCTTACGCTCC
ACCTCTCTCGGGCGCCGCCGACCTCCACGGCGTATTTTTAGCCGCCGCCG
ACACCGCCGCCCCCCCCAACACATATGGCAACAACCACTATGGAAACTCC
AATGCGACTGGATTTTTGCCATCGAACACCGCTGTGAACACCAACAACTT
GGTCAGCAGAAGCAGAAGCAACAGCAACAGCAACAATGACGGGGGGGGGC
GCAGAGGACGCTCTTCGCGGTCCCCGTCACCTTCCAGGCCGGCATCGTCG
GGTCTGTTCTCTCCTTCTTCTCGGCGCCGGCATGGATTGGGGTGGTCCGA
GCCCTCCTCCCCGACGGCTGCCGCGGCGACGGTTGGAGGCCGGAGTGGAG
GGGACGCGAGGGATTATAATCGGGGCGTGGGCAGCGGCGGTGGTGCTGCG
CGGTGGTGGAGG back to top
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