prot_H-paniculata_contig5403.12840.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5403.12840.1
Unique Nameprot_H-paniculata_contig5403.12840.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length112
Homology
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BLAST of mRNA_H-paniculata_contig5403.12840.1 vs. uniprot
Match: A0A6H5K0I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I6_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 1.930e-18
Identity = 59/112 (52.68%), Postives = 73/112 (65.18%), Query Frame = 0 
Query:    1 REGRGSRLGATALAARSRRRLLWQTLSAWRAQAAANSALRAATVARLSSAAKNLVRQAFGRWKDRLAAAARAQAALSMLARVSNRRRSDRAEMRLALRSWKRQARVGDADGG 112
            REGRG+RLGA ALAAR            WR +A A+S LR+  ++R+S AA+ LV +AF  W++    A     AL+ LAR S+RRRSDRAEMRLALR+W R A  GD DGG
Sbjct:  635 REGRGARLGAAALAAR------------WRGEARASSRLRSRALSRISQAAQGLVSEAFSTWREGSRIAHGKAKALTALARASDRRRSDRAEMRLALRTWTRNACGGDGDGG 734
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BLAST of mRNA_H-paniculata_contig5403.12840.1 vs. uniprot
Match: D7FQ01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ01_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 4.390e-5
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 0 
Query:   75 ALSMLARVSNRRRSDRAEMRLALRSWKRQARVGDADGG 112
            AL+ LAR S+RR+SDRAEMRLALR+W+R A  GD DGG
Sbjct:  340 ALTALARASDRRQSDRAEMRLALRTWRRNACGGDGDGG 377
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5403.12840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0I6_9PHAE1.930e-1852.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ01_ECTSI4.390e-571.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5403contigH-paniculata_contig5403:5447..6441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5403.12840.1mRNA_H-paniculata_contig5403.12840.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5403 5447..6442 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5403.12840.1 ID=prot_H-paniculata_contig5403.12840.1|Name=mRNA_H-paniculata_contig5403.12840.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp
REGRGSRLGATALAARSRRRLLWQTLSAWRAQAAANSALRAATVARLSSA
AKNLVRQAFGRWKDRLAAAARAQAALSMLARVSNRRRSDRAEMRLALRSW
KRQARVGDADGG
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