mRNA_H-paniculata_contig54.12835.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig54.12835.1
Unique NamemRNA_H-paniculata_contig54.12835.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig54.12835.1 vs. uniprot
Match: D7FL69_ECTSI (Hydroxyacyl-Coenzyme A dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL69_ECTSI)

HSP 1 Score: 438 bits (1127), Expect = 8.130e-142
Identity = 226/338 (66.86%), Postives = 258/338 (76.33%), Query Frame = 1
Query:    1 VGVCGLGLMGHGIVQVAAMVASPAHAVVAVETNQAALDAGRNRIDESLSKMLSRKVKNGSLSAKDADMQKQQTLSRISYVSDMDAVFDCDIVIEAITENPKIKLPFYEDLGRITRPDCILASNTSSLSIMVRNLSGTRLRSGRIIRWFLTLDREYVSHQLFLLSIPLLQDMALASRRPTHVVGLHFFNPVQMMKLVEVVQTDRTDPGVFEQCKSWVNQIGKHPVSCKDTPGFIVNRLLVPGLAQGMLMLDRGDGSVEDIDRSMELGAGHPMGPLTLADYVGLDTCLSILDGWVNKYPMEPSFVVPECLRRKVAAGKLGRKTGVGFYVWNGDKRAHVAP 1014
            VGV GLGLMGHG+VQV AM +SP + VVAV+ ++ ++DAG+ RID+SLSKML RKVK G L+  DA  QK+   SRISY SD+ A+ DCD+V+EAITENP+IK   ++DL R+TRPDCILASNTSSLSI                                       ++MA+AS RP+HVVGLHFFNPVQ+MKLVEVV+ D TDP VFE+CKSW   +GKHPVSC DTPGFIVNRLLVPGLAQGMLM DRGDGSVEDID+SMELGAGHPMGPLTLADYVGLD CLSILDGWV KYP EPSFVVPECLR KVAAGKLGRK+G GFY+W+GDKR  VAP
Sbjct:   30 VGVVGLGLMGHGVVQVTAMASSPEYTVVAVDGSKDSIDAGKKRIDQSLSKMLDRKVKKGVLTEGDAAAQKEGISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILASNTSSLSI---------------------------------------KEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDPVVFEECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDIDKSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYPDEPSFVVPECLREKVAAGKLGRKSGEGFYLWDGDKRTTVAP 328          
BLAST of mRNA_H-paniculata_contig54.12835.1 vs. uniprot
Match: A0A835YNC1_9STRA (Hydroxyacyl-coenzyme A dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC1_9STRA)

HSP 1 Score: 389 bits (1000), Expect = 2.000e-123
Identity = 205/337 (60.83%), Postives = 235/337 (69.73%), Query Frame = 1
Query:    1 VGVCGLGLMGHGIVQVAAMVASPAHAVVAVETNQAALDAGRNRIDESLSKMLSRKVKNGSLSAKDADMQKQQTLSRISYVSDMDAVFDCDIVIEAITENPKIKLPFYEDLGRITRPDCILASNTSSLSIMVRNLSGTRLRSGRIIRWFLTLDREYVSHQLFLLSIPLLQDMALASRRPTHVVGLHFFNPVQMMKLVEVVQTDRTDPGVFEQCKSWVNQIGKHPVSCKDTPGFIVNRLLVPGLAQGMLMLDRGDGSVEDIDRSMELGAGHPMGPLTLADYVGLDTCLSILDGWVNKYPMEPSFVVPECLRRKVAAGKLGRKTGVGFYVWNGDKRAHVA 1011
            VGV GLGLMGHGIVQ A+M     + VV +E  + A+ AG+ RI+ S+ + LSR V  G L+  DA+ Q    LSRISY +D   + DCD+VIEAITENP IKLP Y +LG +T+P CILASNTSSL I                                        DMA AS RP  VVGLHFFNPVQ+MKLVEVV+TD TDP VFEQC+++VN IGKHPVSCKDTPGFIVNRLLVP LAQ MLM+DRGD SVEDID+SMELGAGHPMGPL LADYVGLDTCL IL GWV+ +P EP+FVVP+CLR  V AGKLGRK+G GFY W GDKR  V+
Sbjct:    8 VGVIGLGLMGHGIVQAASMAPGKRYEVVGLEATEDAIGAGKGRIEASIKRQLSRSVARGKLTEADAESQGADYLSRISYTTDRAGLADCDLVIEAITENPAIKLPLYTELGLLTKPSCILASNTSSLKIA---------------------------------------DMAGASGRPDRVVGLHFFNPVQVMKLVEVVRTDATDPAVFEQCRAFVNSIGKHPVSCKDTPGFIVNRLLVPALAQAMLMVDRGDASVEDIDKSMELGAGHPMGPLALADYVGLDTCLFILQGWVDNFPSEPAFVVPDCLRAMVDAGKLGRKSGEGFYKWEGDKRGPVS 305          
BLAST of mRNA_H-paniculata_contig54.12835.1 vs. uniprot
Match: A0A7S2SEQ6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEQ6_9STRA)

HSP 1 Score: 347 bits (890), Expect = 6.530e-107
Identity = 184/333 (55.26%), Postives = 229/333 (68.77%), Query Frame = 1
Query:    1 VGVCGLGLMGHGIVQVAAMVASPAHAVVAVETNQAALDAGRNRIDESLSKMLSRKVKNGSLSAKDADMQKQQTLSRISYVSDMDAVFDCDIVIEAITENPKIKLPFYEDLGRITRPDCILASNTSSLSIMVRNLSGTRLRSGRIIRWFLTLDREYVSHQLFLLSIPLLQDMALASRRPTHVVGLHFFNPVQMMKLVEVVQTDRTDPGVFEQCKSWVNQIGKHPVSCKDTPGFIVNRLLVPGLAQGMLMLDRGDGSVEDIDRSMELGAGHPMGPLTLADYVGLDTCLSILDGWVNKYPMEPSFVVPECLRRKVAAGKLGRKTGVGFYVWNGDKR 999
            VG+ GLGLMGHGI Q   M AS  + VVAVET+Q AL  G+ RI  S+SK+LS++V  G L+ ++A  ++  TL +++Y +D++ + +CD+++EAI E+  IKLPFYE LG+  +P+ I ASNTSSLS+                                       ++MA AS RP   VGLHFFNPVQ+MKLVEV++T+ T+P  FE  K W   IGK  VSC DTPGFIVNRLLVP +AQGMLM+DR + SVEDID SM+LGAGHPMGPLTLADYVGLDTCLSIL+GW  KYP E +FV+PECL+ KVAAGK GRK+G GFY W GDKR
Sbjct:   43 VGMVGLGLMGHGIAQ---MAASSGYQVVAVETSQEALQQGQERITSSVSKLLSKQVAKGKLTEQEAAEKEASTLGQLTYSTDLNDLDNCDLIVEAIIEDVSIKLPFYEALGKTVKPEAIFASNTSSLSV---------------------------------------KEMADASGRPDRFVGLHFFNPVQLMKLVEVIRTEDTNPEAFELSKHWAQSIGKTTVSCSDTPGFIVNRLLVPAMAQGMLMVDRQEASVEDIDVSMQLGAGHPMGPLTLADYVGLDTCLSILEGWREKYPNEAAFVLPECLQAKVAAGKFGRKSGEGFYKWEGDKR 333          
BLAST of mRNA_H-paniculata_contig54.12835.1 vs. uniprot
Match: A0A3F2RFQ7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RFQ7_9STRA)

HSP 1 Score: 344 bits (882), Expect = 1.910e-106
Identity = 183/327 (55.96%), Postives = 222/327 (67.89%), Query Frame = 1
Query:   19 GLMGHGIVQVAAMVASPAHAVVAVETNQAALDAGRNRIDESLSKMLSRKVKNGSLSAKDADMQKQQTLSRISYVSDMDAVFDCDIVIEAITENPKIKLPFYEDLGRITRPDCILASNTSSLSIMVRNLSGTRLRSGRIIRWFLTLDREYVSHQLFLLSIPLLQDMALASRRPTHVVGLHFFNPVQMMKLVEVVQTDRTDPGVFEQCKSWVNQIGKHPVSCKDTPGFIVNRLLVPGLAQGMLMLDRGDGSVEDIDRSMELGAGHPMGPLTLADYVGLDTCLSILDGWVNKYPMEPSFVVPECLRRKVAAGKLGRKTGVGFYVWNGDKR 999
            GLMGHGI Q AA   S    VVA++ N   L++G  RID SL+K+LSR VK G+++ + AD QK QTL RI+  +++  + DCD+VIEAI EN ++K  FY +LG++ +P  ILASNTSSL+I                                        D A +S R + VVGLHFFNPVQ+MKLVEVV+TD TDP +FE CK WV  IGKHPVSCKDTPGFIVNRLLVP LAQ + + +RGD S EDID SM+ GAGHPMGP+TLADYVGLDT L IL+GWV  +P EP+F VPE +R+KVA GKLGRKTG GFY W+GDKR
Sbjct:    6 GLMGHGIAQTAA---SAGFDVVALDANPKGLESGMKRIDGSLTKLLSRGVKKGTITQQQADEQKTQTLGRITATTEIQELQDCDLVIEAIVENVEVKKEFYANLGKVVKPSAILASNTSSLAI---------------------------------------SDFAGSSGRASQVVGLHFFNPVQLMKLVEVVRTDATDPAIFEACKQWVLDIGKHPVSCKDTPGFIVNRLLVPYLAQAIALYERGDASKEDIDVSMQFGAGHPMGPITLADYVGLDTTLFILEGWVRDHPNEPAFFVPEIVRKKVAEGKLGRKTGEGFYKWDGDKR 290          
BLAST of mRNA_H-paniculata_contig54.12835.1 vs. uniprot
Match: F0WF14_9STRA (Hydroxyacylcoenzyme A dehydrogenase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WF14_9STRA)

HSP 1 Score: 343 bits (881), Expect = 9.420e-106
Identity = 182/334 (54.49%), Postives = 229/334 (68.56%), Query Frame = 1
Query:    1 VGVCGLGLMGHGIVQVAAMVASPAHAVVAVETNQAALDAGRNRIDESLSKMLSRKVKNGSLSAKDADMQKQQTLSRISYVSDMDAVFDCDIVIEAITENPKIKLPFYEDLGRITRPDCILASNTSSLSIMVRNLSGTRLRSGRIIRWFLTLDREYVSHQLFLLSIPLLQDMALASRRPTHVVGLHFFNPVQMMKLVEVVQTDRTDPGVFEQCKSWVNQIGKHPVSCKDTPGFIVNRLLVPGLAQGMLMLDRGDGSVEDIDRSMELGAGHPMGPLTLADYVGLDTCLSILDGWVNKYPMEPSFVVPECLRRKVAAGKLGRKTGVGFYVWNGDKRA 1002
            VG+ GLGLMGHGI Q+AA   S    VVAV+ ++  LD G NRI ESL KM +R VK G+++ ++A  + +++ +RIS  +DM+ + DCD++IEAI E+ K+K  FYE LG++ +PD I ASNTSSL I                                          A +S+R   VVGLHFFNPVQ+MKLVEV++TD TDP VFE+CK+WV+QIGKHPVSCKDTPGFIVNRLL+P L+Q +L+ +RGD + EDID SM+ G GHPMGP+TLADYVGLDT L ILDGWV  +P E +FVVP+ LR+KVA GKLGRK G GFY W GDKR+
Sbjct:   37 VGMVGLGLMGHGIAQIAA---SAGFDVVAVDMSRPNLDTGMNRIRESLDKMNARSVKKGAMTKEEATERAKESFNRISPTTDMNQLSDCDLIIEAIVEDVKVKRSFYEKLGQLAKPDAIFASNTSSLPISA---------------------------------------FADSSKRSPQVVGLHFFNPVQIMKLVEVIKTDATDPNVFEKCKAWVHQIGKHPVSCKDTPGFIVNRLLIPYLSQALLLYERGDATKEDIDISMQYGTGHPMGPITLADYVGLDTMLYILDGWVRDHPNENAFVVPDILRQKVAEGKLGRKIGEGFYKWEGDKRS 328          
BLAST of mRNA_H-paniculata_contig54.12835.1 vs. uniprot
Match: K3X1E9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1E9_GLOUD)

HSP 1 Score: 343 bits (879), Expect = 1.900e-105
Identity = 186/333 (55.86%), Postives = 223/333 (66.97%), Query Frame = 1
Query:    1 VGVCGLGLMGHGIVQVAAMVASPAHAVVAVETNQAALDAGRNRIDESLSKMLSRKVKNGSLSAKDADMQKQQTLSRISYVSDMDAVFDCDIVIEAITENPKIKLPFYEDLGRITRPDCILASNTSSLSIMVRNLSGTRLRSGRIIRWFLTLDREYVSHQLFLLSIPLLQDMALASRRPTHVVGLHFFNPVQMMKLVEVVQTDRTDPGVFEQCKSWVNQIGKHPVSCKDTPGFIVNRLLVPGLAQGMLMLDRGDGSVEDIDRSMELGAGHPMGPLTLADYVGLDTCLSILDGWVNKYPMEPSFVVPECLRRKVAAGKLGRKTGVGFYVWNGDKR 999
            VG+ GLGLMGHGI Q AA        VVAV+ NQA LDAG  RI+ SL+K++ R VK G+++ +DA  Q  +TL  I+  +  D + DCD+VIEAI EN  +K  FY +LGRI +P  I ASNTSSL+I                                        D A +S R + VVGLHFFNPVQ+MKLVEVV+TD TDP VFE  K+WV+ IGKHPVSCKDTPGFIVNRLLVP LAQ + + +RGD + EDID SM+ GAGHPMGP+TLADYVGLDT L IL+GWV  +P EP+F VPE +R+KVA GKLGRKTG GFY W+GDKR
Sbjct:   38 VGMVGLGLMGHGIAQTAAQAGFQ---VVAVDMNQAGLDAGMKRIEGSLNKIVGRNVKKGTITEEDAQQQIAKTLGLITPTTSQDDLADCDLVIEAIIENVNVKKDFYANLGRIVKPSAIFASNTSSLAI---------------------------------------SDFAGSSGRASQVVGLHFFNPVQLMKLVEVVRTDATDPAVFEASKNWVHAIGKHPVSCKDTPGFIVNRLLVPYLAQAIALYERGDATKEDIDVSMQFGAGHPMGPITLADYVGLDTTLFILEGWVRDHPNEPAFFVPEIVRQKVAEGKLGRKTGEGFYKWDGDKR 328          
BLAST of mRNA_H-paniculata_contig54.12835.1 vs. uniprot
Match: H3G9F5_PHYRM (Uncharacterized protein n=21 Tax=Phytophthora TaxID=4783 RepID=H3G9F5_PHYRM)

HSP 1 Score: 339 bits (869), Expect = 4.500e-104
Identity = 181/333 (54.35%), Postives = 225/333 (67.57%), Query Frame = 1
Query:    1 VGVCGLGLMGHGIVQVAAMVASPAHAVVAVETNQAALDAGRNRIDESLSKMLSRKVKNGSLSAKDADMQKQQTLSRISYVSDMDAVFDCDIVIEAITENPKIKLPFYEDLGRITRPDCILASNTSSLSIMVRNLSGTRLRSGRIIRWFLTLDREYVSHQLFLLSIPLLQDMALASRRPTHVVGLHFFNPVQMMKLVEVVQTDRTDPGVFEQCKSWVNQIGKHPVSCKDTPGFIVNRLLVPGLAQGMLMLDRGDGSVEDIDRSMELGAGHPMGPLTLADYVGLDTCLSILDGWVNKYPMEPSFVVPECLRRKVAAGKLGRKTGVGFYVWNGDKR 999
            VG+ GLGLMGHGI Q AA   S    VVA++ N   L++G  RI+ SL+K+LSR VK G+++ + AD Q    L RI+  +++ A+ DCD+VIEAI EN ++K  FY +LG++ +P  ILASNTSSL+I                                        D A +S R + VVGLHFFNPVQ+MKLVEV++TD TDP VF+ CK WV  IGKHPVSCKDTPGFIVNRLLVP LAQ + + +RGD + EDID SM+ GAGHPMGP+TLADYVGLDT L IL+GWV  +P EP+F VP+ +R+KVA GKLGRKTG GFY W+GDKR
Sbjct:   33 VGMVGLGLMGHGIAQTAA---SAGFDVVALDANPQGLESGMKRIEGSLTKLLSRGVKKGTITQQQADDQAAAALGRITPTTELQALADCDLVIEAIVENVEVKKEFYANLGQVAKPSAILASNTSSLAI---------------------------------------SDFAGSSGRASQVVGLHFFNPVQLMKLVEVIRTDATDPKVFDACKQWVLDIGKHPVSCKDTPGFIVNRLLVPYLAQAISLYERGDATKEDIDVSMQFGAGHPMGPITLADYVGLDTTLFILEGWVRDHPNEPAFFVPDIVRKKVAEGKLGRKTGEGFYKWDGDKR 323          
BLAST of mRNA_H-paniculata_contig54.12835.1 vs. uniprot
Match: A0A662Y269_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y269_9STRA)

HSP 1 Score: 338 bits (867), Expect = 1.110e-103
Identity = 182/333 (54.65%), Postives = 222/333 (66.67%), Query Frame = 1
Query:    1 VGVCGLGLMGHGIVQVAAMVASPAHAVVAVETNQAALDAGRNRIDESLSKMLSRKVKNGSLSAKDADMQKQQTLSRISYVSDMDAVFDCDIVIEAITENPKIKLPFYEDLGRITRPDCILASNTSSLSIMVRNLSGTRLRSGRIIRWFLTLDREYVSHQLFLLSIPLLQDMALASRRPTHVVGLHFFNPVQMMKLVEVVQTDRTDPGVFEQCKSWVNQIGKHPVSCKDTPGFIVNRLLVPGLAQGMLMLDRGDGSVEDIDRSMELGAGHPMGPLTLADYVGLDTCLSILDGWVNKYPMEPSFVVPECLRRKVAAGKLGRKTGVGFYVWNGDKR 999
            VG+ GLGLMGHGI Q AA   S    VVA+++N   L +G  RI+ SL K+L R VK G+L+   AD Q   TL+RI+  +++  + DCD+VIEAI EN ++K  FY +LGR+ +P  ILASNTSSL+I                                        D A +S R   VVGLHFFNPVQ+MKLVEVV+TD TDP +FE CK WV  IGKHPVSCKDTPGFIVNRLLVP L+Q + + +RGD + EDID SM+ GAGHPMGP+TLADYVGLDT L IL+GWV  +P EP+F VP+ +R+KVA GKLGRKTG GFY W+GDKR
Sbjct:   40 VGMVGLGLMGHGIAQTAA---SAGFDVVALDSNAKGLKSGMKRIEGSLGKLLGRSVKKGTLTQAQADEQAAATLARITPTTELADLGDCDLVIEAIVENVEVKKEFYANLGRVAKPSAILASNTSSLAI---------------------------------------SDFAGSSGRAPQVVGLHFFNPVQLMKLVEVVRTDATDPAIFEACKQWVLDIGKHPVSCKDTPGFIVNRLLVPYLSQAIALYERGDATKEDIDVSMQYGAGHPMGPITLADYVGLDTTLFILEGWVRDHPNEPAFFVPDVIRKKVAEGKLGRKTGEGFYKWDGDKR 330          
BLAST of mRNA_H-paniculata_contig54.12835.1 vs. uniprot
Match: A0A3M6VA69_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA69_9STRA)

HSP 1 Score: 337 bits (863), Expect = 3.210e-103
Identity = 181/333 (54.35%), Postives = 222/333 (66.67%), Query Frame = 1
Query:    1 VGVCGLGLMGHGIVQVAAMVASPAHAVVAVETNQAALDAGRNRIDESLSKMLSRKVKNGSLSAKDADMQKQQTLSRISYVSDMDAVFDCDIVIEAITENPKIKLPFYEDLGRITRPDCILASNTSSLSIMVRNLSGTRLRSGRIIRWFLTLDREYVSHQLFLLSIPLLQDMALASRRPTHVVGLHFFNPVQMMKLVEVVQTDRTDPGVFEQCKSWVNQIGKHPVSCKDTPGFIVNRLLVPGLAQGMLMLDRGDGSVEDIDRSMELGAGHPMGPLTLADYVGLDTCLSILDGWVNKYPMEPSFVVPECLRRKVAAGKLGRKTGVGFYVWNGDKR 999
            VG+ GLGLMGHGI Q AA   +    VVA++ N   L +G  RI+ SLSK+  R VK G+++ + AD Q    L+RI+  +++D + DCD+VIEAI EN  +K  FY DLG++ +P  ILASNTSSL+I                                        D A +S R + VVGLHFFNPVQ+MKLVEVV+TD TDP +F+ CK WV  IGKHPVSCKDTPGFIVNRLLVP LAQ + + +RGD + EDID SM+LGAGHPMGP+TLADYVGLDT L IL+GWV  +P EP+F VPE + +KVA GKLGRKTG GFY W+GDKR
Sbjct:   32 VGMVGLGLMGHGIAQTAA---AAGFDVVALDANPKGLQSGMKRIEMSLSKLRGRDVKKGTITQQQADDQIAAALARITPTTELDGLTDCDLVIEAIVENVDVKKKFYADLGKVAKPTAILASNTSSLAI---------------------------------------SDFAGSSGRASQVVGLHFFNPVQLMKLVEVVRTDVTDPKIFDACKQWVLDIGKHPVSCKDTPGFIVNRLLVPYLAQAISLYERGDATKEDIDISMQLGAGHPMGPITLADYVGLDTMLFILEGWVRDHPNEPAFYVPEIIHKKVAEGKLGRKTGEGFYKWDGDKR 322          
BLAST of mRNA_H-paniculata_contig54.12835.1 vs. uniprot
Match: A0A5D6YQW8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQW8_9STRA)

HSP 1 Score: 337 bits (863), Expect = 4.070e-103
Identity = 183/333 (54.95%), Postives = 221/333 (66.37%), Query Frame = 1
Query:    1 VGVCGLGLMGHGIVQVAAMVASPAHAVVAVETNQAALDAGRNRIDESLSKMLSRKVKNGSLSAKDADMQKQQTLSRISYVSDMDAVFDCDIVIEAITENPKIKLPFYEDLGRITRPDCILASNTSSLSIMVRNLSGTRLRSGRIIRWFLTLDREYVSHQLFLLSIPLLQDMALASRRPTHVVGLHFFNPVQMMKLVEVVQTDRTDPGVFEQCKSWVNQIGKHPVSCKDTPGFIVNRLLVPGLAQGMLMLDRGDGSVEDIDRSMELGAGHPMGPLTLADYVGLDTCLSILDGWVNKYPMEPSFVVPECLRRKVAAGKLGRKTGVGFYVWNGDKR 999
            VG+ GLGLMGHGI Q AA        VVA++ ++A L+AG  RI+ SL+K++ R VK G+LS   A  Q + TL+RI+  +D  A+ DCD+VIEAI EN  +K  FY +LGR+ +P  I ASNTSSL+I                                        D A AS R   VVGLHFFNPVQ+MKLVEVV+TD TD  VF+  K+WV+ IGKHPVSCKDTPGFIVNRLLVP LAQ + + +RGD S EDID SM+ GAGHPMGP+TLADYVGLDT L IL+GWV  +P +P+F VPE +R KVA GKLGRKTG GFY W+GDKR
Sbjct:   39 VGMVGLGLMGHGIAQTAAQAGFQ---VVALDMHEAGLEAGMKRIEGSLAKLVGRAVKKGALSEDAAQAQVRDTLARITPTTDQQALADCDLVIEAIVENVDVKKDFYANLGRLVKPSAIFASNTSSLAI---------------------------------------SDFAGASGRAAQVVGLHFFNPVQLMKLVEVVRTDATDAAVFDAAKNWVHAIGKHPVSCKDTPGFIVNRLLVPYLAQAIALYERGDASKEDIDVSMQFGAGHPMGPITLADYVGLDTTLFILEGWVRDHPNDPAFFVPEIVRHKVAEGKLGRKTGEGFYKWDGDKR 329          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig54.12835.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL69_ECTSI8.130e-14266.86Hydroxyacyl-Coenzyme A dehydrogenase n=2 Tax=Ectoc... [more]
A0A835YNC1_9STRA2.000e-12360.83Hydroxyacyl-coenzyme A dehydrogenase n=1 Tax=Tribo... [more]
A0A7S2SEQ6_9STRA6.530e-10755.26Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A3F2RFQ7_9STRA1.910e-10655.96Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
F0WF14_9STRA9.420e-10654.49Hydroxyacylcoenzyme A dehydrogenase putative n=1 T... [more]
K3X1E9_GLOUD1.900e-10555.86Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3G9F5_PHYRM4.500e-10454.35Uncharacterized protein n=21 Tax=Phytophthora TaxI... [more]
A0A662Y269_9STRA1.110e-10354.65Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A3M6VA69_9STRA3.210e-10354.35Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A5D6YQW8_9STRA4.070e-10354.95Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig54contigH-paniculata_contig54:31800..35312 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score431.8
Seed ortholog evalue2.9e-118
Seed eggNOG ortholog2880.D7FL69
Preferred nameHADH
KEGG rclassRC00029,RC00099,RC00103,RC00117,RC00241,RC00525
KEGG koko:K00022
KEGG ReactionR01778,R01975,R04203,R04737,R04739,R04741,R04743,R04745,R04748,R05066,R06941,R08094
KEGG Pathwayko00062,ko00071,ko00280,ko00281,ko00310,ko00380,ko00650,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00062,map00071,map00280,map00281,map00310,map00380,map00650,map00930,map01100,map01110,map01120,map01130,map01212
KEGG ModuleM00032,M00085,M00087
Hectar predicted targeting categorysignal peptide
GOsGO:0002791,GO:0002792,GO:0003674,GO:0003824,GO:0003857,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0010646,GO:0010648,GO:0010817,GO:0014823,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019395,GO:0019752,GO:0023051,GO:0023057,GO:0030258,GO:0031974,GO:0031981,GO:0032787,GO:0032868,GO:0032879,GO:0032880,GO:0034440,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043434,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046676,GO:0046883,GO:0046888,GO:0048519,GO:0048523,GO:0050708,GO:0050709,GO:0050789,GO:0050794,GO:0050796,GO:0050896,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051223,GO:0051224,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0070201,GO:0071704,GO:0072329,GO:0090087,GO:0090276,GO:0090278,GO:1901575,GO:1901652,GO:1901698,GO:1901700,GO:1903530,GO:1903531,GO:1904950
EggNOG free text desc.3-hydroxyacyl-CoA dehydrogenase activity
EggNOG OGsCOG1250@1,KOG2304@2759
Ec32 ortholog descriptionhydroxyacyl-Coenzyme A dehydrogenase
Ec32 orthologEc-19_005290.1
EC1.1.1.35
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons3
Model size3290
Cds size993
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig54.12835.1prot_H-paniculata_contig54.12835.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig54 34073..35288 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930553.4881363-UTR-H-paniculata_contig54:31799..340721622930553.4881363-UTR-H-paniculata_contig54:31799..34072Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig54 31800..34072 -
1691481345.4642625-UTR-H-paniculata_contig54:31799..340721691481345.4642625-UTR-H-paniculata_contig54:31799..34072Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig54 31800..34072 -
1622930553.5533426-UTR-H-paniculata_contig54:35288..353121622930553.5533426-UTR-H-paniculata_contig54:35288..35312Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig54 35289..35312 -
1691481345.5086467-UTR-H-paniculata_contig54:35288..353121691481345.5086467-UTR-H-paniculata_contig54:35288..35312Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig54 35289..35312 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930553.50341-CDS-H-paniculata_contig54:34072..342581622930553.50341-CDS-H-paniculata_contig54:34072..34258Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig54 34073..34258 -
1691481345.4790225-CDS-H-paniculata_contig54:34072..342581691481345.4790225-CDS-H-paniculata_contig54:34072..34258Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig54 34073..34258 -
1622930553.5221007-CDS-H-paniculata_contig54:34371..344951622930553.5221007-CDS-H-paniculata_contig54:34371..34495Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig54 34372..34495 -
1691481345.488734-CDS-H-paniculata_contig54:34371..344951691481345.488734-CDS-H-paniculata_contig54:34371..34495Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig54 34372..34495 -
1622930553.5383534-CDS-H-paniculata_contig54:34605..352881622930553.5383534-CDS-H-paniculata_contig54:34605..35288Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig54 34606..35288 -
1691481345.4987109-CDS-H-paniculata_contig54:34605..352881691481345.4987109-CDS-H-paniculata_contig54:34605..35288Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig54 34606..35288 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig54.12835.1

>prot_H-paniculata_contig54.12835.1 ID=prot_H-paniculata_contig54.12835.1|Name=mRNA_H-paniculata_contig54.12835.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=331bp
MGHGIVQVAAMVASPAHAVVAVETNQAALDAGRNRIDESLSKMLSRKVKN
GSLSAKDADMQKQQTLSRISYVSDMDAVFDCDIVIEAITENPKIKLPFYE
DLGRITRPDCILASNTSSLSIMVRNLSGTRLRSGRIIRWFLTLDREYVSH
QLFLLSIPLLQDMALASRRPTHVVGLHFFNPVQMMKLVEVVQTDRTDPGV
FEQCKSWVNQIGKHPVSCKDTPGFIVNRLLVPGLAQGMLMLDRGDGSVED
IDRSMELGAGHPMGPLTLADYVGLDTCLSILDGWVNKYPMEPSFVVPECL
RRKVAAGKLGRKTGVGFYVWNGDKRAHVAP*
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mRNA from alignment at H-paniculata_contig54:31800..35312-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig54.12835.1 ID=mRNA_H-paniculata_contig54.12835.1|Name=mRNA_H-paniculata_contig54.12835.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3513bp|location=Sequence derived from alignment at H-paniculata_contig54:31800..35312- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGGGGGTTTGCGGATTGGGGCTTATGGGCCACGGAATCGTCCAAGTTGC GGCAATGGTCGCCTCTCCTGCGCACGCTGTTGTTGCTGTGGAAACCAACC AAGCTGCCCTTGATGCTGGACGCAACCGGATAGATGAATCCCTTTCAAAG ATGCTATCAAGGAAAGTCAAGAATGGATCTCTGAGCGCTAAGGACGCGGA CATGCAGAAGCAACAGACCTTGTCGCGTATTTCTTATGTCTCTGACATGG ATGCGGTGTTCGACTGTGACATTGTGATCGAAGCCATCACGGAGAATCCG AAGATCAAGCTCCCCTTTTACGAGGATCTTGGACGCATTACTCGGCCTGA TTGCATTCTTGCTTCCAACACGTCGTCGCTCAGCATTATGGTGAGGAATT TATCGGGAACTCGGCTGAGAAGCGGTAGGATTATACGCTGGTTCCTGACC CTTGACCGCGAATATGTATCCCACCAATTATTTCTTCTTTCTATCCCTCT TCTTCAGGATATGGCGTTGGCATCGCGACGTCCCACGCACGTGGTTGGGT TGCACTTCTTCAACCCGGTGCAGATGATGAAGCTTGTAGAAGTCGTACAA ACCGACAGAACGGACCCCGGCGTGTTTGAGCAATGCAAATCATGGGTGAA TCAAATCGGCAAGCACCCAGTGTCGTGCAAAGATACCCCAGGTTTTATCG TGAACAGGTCAGTCTGTGGTCATCCATTATCCACTTATCTTTGGGGTTGT GTTATCGTTATCGCGATATAGAAGCCCATGTGCTCAAGGCCCCCGCACTC GCGTTTGTGTTGACCAGACTCCTCGTGCCTGGGCTGGCGCAGGGTATGCT AATGCTCGACCGAGGTGATGGGTCGGTGGAAGACATAGACAGGTCTATGG AACTTGGAGCAGGCCATCCTATGGGTCCACTGACACTGGCGGTGAGAGGG TACTTCGCAAGGGCAATGCATCGAGTACACCGCAGAGTAGCTTTGTGTCG TGTCGTCCTCATCATGATGTATTTACTTTTGCCGCCTACTGCCCTAAAAC ACAGGATTACGTTGGGCTGGATACGTGTCTTTCCATCCTGGATGGCTGGG TGAACAAATACCCCATGGAACCGTCGTTTGTGGTGCCAGAATGCCTCAGA CGAAAGGTTGCGGCTGGCAAGCTTGGTCGAAAAACGGGCGTGGGCTTTTA CGTTTGGAATGGTGACAAGCGCGCCCATGTGGCACCTTGAGTCAGTGGTG CAAGCAACTGCCGCCGACTTGCAATTTCTATTTGTATCCGAAAGTGTATC CGAATTGGTGATTTCCACTCAGTCAGCTGTTGTATGATGTGTGGTTCCAA TTATTATGTCAAGCACCAATTCCCTGGCATGGCTCAAACTATAGTGTAGA TCTATTGAATCTTCAGTCACATCGGTAATGAATGCTGTGTGTTGCCTTGT TACTTTGATGAGTCCGCGTGCGATAGACAAAGCGTGGTGAATGGGGGGGG TCTCACGAATTATAGGTTCTCGAGGCCACCGACACAGAGTCGCGGCGGAT TCTTTGGTATGGCGACTTTGGAAGTATTCTATCTAGGTTCCCGACCCAAA ATCACCGAAGTGACTCGCACTTGTTCGCTTTTTTTAACCGTGTCATGTGT GAACGCCAGAGTTAGAAAATGTTACAACCTAGTGACTAATGACTACTGAT CACTTGACGATTGCCCCGTGACGCCTGTGCCGCTCGAAAAATTGAATTCT TCGTAAAGAGCGAGATATTTCGTACATGTTGTTAATTGTGAAAGCAAACA AATGTATCTCACCTACACTGCGAAATTTCCTGAATTGAGGCGTTCCAAAG ATCGTTTAGTTTATCCTACTGTTGGAGGGTTCGGCACGTAAATGTTCAAC TCGATGGTCAAGCCTTTGAAGCAAAGTTGTGACGTTCCTCGTCGAACCAC GGCGGGGGTTCCTAGACACTGCAACCTAAACACATGTGCGTGTATCAGCG GGATATTCTGCCTTTTTGCCAGTCCCTCTTCACGGCTCTTCAACACGATC AGGACCATTGCCCTTCTACGGGTAGACCGTACATGTAATCCTCTTTCCAT AGATATAACTATATTTCCTCTGTCCCATAAGTCTGTAGTTACATCGTATG GGAAAAATCCGAGCAGATCACTCGAAAGCCCGCAACTTCGGCTTGAACAC AAATATCTCCAGAATATGTTTCCAGTACAAAATGGTTGAGGAAATGGTAT TTCAACCGTAGTATAGTAAGAGTGACATTGTGCCACCTCCCCCCGATCCG AGCCTGGAGCACAAGCTTGGACGTGCAAGCGGTCATTCAAGAAGCGTGGA GCGCCTGAGAACATGTACGACGTGAACTGCGGGCTAATACCCTGAGCGCC ACCCTCAACAAGTCGCTCAAGGTGACTGACAAAGCCTTTGAAAAGGTGAG AGCGGACGCGGTACACAGTTTCCTGGACGAGCACCTCGTGGAGATGGAGG TACACCTTCACAAGCAGGACCAGGCAAGCCTCTTCTCCGATATCAAGGCA ATTAATCTGGAGGGAAAGCAGCCCTGCACGTCTCAGTATGTTAAGAGCGA ACTGGGCAACCCACTGCGGGACAAGTCGCTGATCCTCCAACGCTGGGTAC GGTATCTCTCCGCGCTCAACATGAAGTCTGCCAACATGGACCCTATATCG TGGACCAAGTCGATGTACAACCCGAATTCGCTCCTCTTCGTAGATGAACT GAAAATCGATGGAGTTAAGTTCGCGTTGCTCAAGGTGGCGAATGGGAAAG CAGTTGGACCGGATGACCTCTCCTGAGCTCCTGAAGCTCGGTGTGCGTGA GGAACCCGCCATCTTGTAATCATGTTCGTCATGCGCAAACTGCACGAACT CGCCCGGGAACAAAAGACGCTTCTCTACACATGCTTCGTTGACCTTCAGA AGGCGTATGACTCAGTAGACCGTACCATTCTGTTGGAAGTGCTCACACGC TTTGGCGTACTGCGGTTGGTGTCGATTATCCGCTCGTTACATGCGTGAAT GGAACACAGGCTAGGTAGCGAAGACTCATGCCCGGAAGCGCGAGAGGACA TTGCCTTGCTGCCTTTCTCTGTAGATGGTCCACCCTGATGGACACTGTGA CCTTGGCGCGTGTGTCTTTGGCTTTGGTTTTCCTTGGTTACTTTTTCTGT TTTTGTTTTGTGTTTGTTTACCTCTTCTGCGGTTTTATCCTGGTTTTATT TTCCCTTTTTATGAGAGCTCCATTCGTTTTTATGGCTTATTCTGTTATTA TACACAATCGCCGTTTACCCTGCACCCACAGGTCTGAAGGCCCGGCTAAT ATATGAACAAAATATTTTTATTATGATTACGATTACGATCACGATCACGA TCACGATTACTAATACTATTACTTTTATTATTATCGTTATCATTATCATT ATCATCATCACTATCATTATTACTAGTAGTAGTAGTATTATCATAATCAA ATTAACGTCAGAC
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Coding sequence (CDS) from alignment at H-paniculata_contig54:31800..35312-

>mRNA_H-paniculata_contig54.12835.1 ID=mRNA_H-paniculata_contig54.12835.1|Name=mRNA_H-paniculata_contig54.12835.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1986bp|location=Sequence derived from alignment at H-paniculata_contig54:31800..35312- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCCACGGAATCGTCCAAGTTGCGGCAATGGTCGCCTCTCCTGCGCA
CGCTGTTGTTGCTGTGGAAACCAACCAAGCTGCCCTTGATGCTGGACGCA
ACCGGATAGATGAATCCCTTTCAAAGATGCTATCAAGGAAAGTCAAGAAT
GGATCTCTGAGCGCTAAGGACGCGGACATGCAGAAGCAACAGACCTTGTC
GCGTATTTCTTATGTCTCTGACATGGATGCGGTGTTCGACTGTGACATTG
TGATCGAAGCCATCACGGAGAATCCGAAGATCAAGCTCCCCTTTTACGAG
GATCTTGGACGCATTACTCGGCCTGATTGCATTCTTGCTTCCAACACGTC
GTCGCTCAGCATTATGGTGAGGAATTTATCGGGAACTCGGCTGAGAAGCG
GTAGGATTATACGCTGGTTCCTGACCCTTGACCGCGAATATGTATCCCAC
CAATTATTTCTTCTTTCTATCCCTCTTCTTCAGGATATGGCGTTGGCATC
GCGACGTCCCACGCACGTGGTTGGGTTGCACTTCTTCAACCCGGTGCAGA
TGATGAAGCTTGTAGAAGTCGTACAAACCGACAGAACGGACCCCGGCGTG
TTTGAGCAATGCAAATCATGGGTGAATCAAATCGGCAAGCACCCAGTGTC
GTGCAAAGATACCCCAGGTTTTATCGTGAACAGATGGGCCACGGAATCGT
CCAAGTTGCGGCAATGGTCGCCTCTCCTGCGCACGCTGTTGTTGCTGTGG
AAACCAACCAAGCTGCCCTTGATGCTGGACGCAACCGGATAGATGAATCC
CTTTCAAAGATGCTATCAAGGAAAGTCAAGAATGGATCTCTGAGCGCTAA
GGACGCGGACATGCAGAAGCAACAGACCTTGTCGCGTATTTCTTATGTCT
CTGACATGGATGCGGTGTTCGACTGTGACATTGTGATCGAAGCCATCACG
GAGAATCCGAAGATCAAGCTCCCCTTTTACGAGGATCTTGGACGCATTAC
TCGGCCTGATTGCATTCTTGCTTCCAACACGTCGTCGCTCAGCATTATGG
TGAGGAATTTATCGGGAACTCGGCTGAGAAGCGGTAGGATTATACGCTGG
TTCCTGACCCTTGACCGCGAATATGTATCCCACCAATTATTTCTTCTTTC
TATCCCTCTTCTTCAGGATATGGCGTTGGCATCGCGACGTCCCACGCACG
TGGTTGGGTTGCACTTCTTCAACCCGGTGCAGATGATGAAGCTTGTAGAA
GTCGTACAAACCGACAGAACGGACCCCGGCGTGTTTGAGCAATGCAAATC
ATGGGTGAATCAAATCGGCAAGCACCCAGTGTCGTGCAAAGATACCCCAG
GTTTTATCGTGAACAGACTCCTCGTGCCTGGGCTGGCGCAGGGTATGCTA
ATGCTCGACCGAGGTGATGGGTCGGTGGAAGACATAGACAGGTCTATGGA
ACTTGGAGCAGGCCATCCTATGGGTCCACTGACACTGGCGACTCCTCGTG
CCTGGGCTGGCGCAGGGTATGCTAATGCTCGACCGAGGTGATGGGTCGGT
GGAAGACATAGACAGGTCTATGGAACTTGGAGCAGGCCATCCTATGGGTC
CACTGACACTGGCGGATTACGTTGGGCTGGATACGTGTCTTTCCATCCTG
GATGGCTGGGTGAACAAATACCCCATGGAACCGTCGTTTGTGGTGCCAGA
ATGCCTCAGACGAAAGGTTGCGGCTGGCAAGCTTGGTCGAAAAACGGGCG
TGGGCTTTTACGTTTGGAATGGTGACAAGCGCGCCCATGTGGCACCTTGA
GATTACGTTGGGCTGGATACGTGTCTTTCCATCCTGGATGGCTGGGTGAA
CAAATACCCCATGGAACCGTCGTTTGTGGTGCCAGAATGCCTCAGACGAA
AGGTTGCGGCTGGCAAGCTTGGTCGAAAAACGGGCGTGGGCTTTTACGTT
TGGAATGGTGACAAGCGCGCCCATGTGGCACCTTGA
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