prot_H-paniculata_contig53995.12827.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig53995.12827.1
Unique Nameprot_H-paniculata_contig53995.12827.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length102
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53995.12827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.40coord: 13..84
e-value: 1.1E-7
score: 33.6
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 28..82
score: 11.381
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 24..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig53995contigH-paniculata_contig53995:45..350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig53995.12827.1mRNA_H-paniculata_contig53995.12827.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig53995 42..350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig53995.12827.1 ID=prot_H-paniculata_contig53995.12827.1|Name=mRNA_H-paniculata_contig53995.12827.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
MRPYVDASLIVGKDVQAVFAAAQHQGEFQISNILDISESRDKKGEYILLV
EWVGLGAEERSWEPVAVIHEDVPQYLRRKLKKTRLDASTWATLKAKYNIV
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR016197Chromo-like_dom_sf