prot_H-paniculata_contig53989.12826.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig53989.12826.1
Unique Nameprot_H-paniculata_contig53989.12826.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
BLAST of mRNA_H-paniculata_contig53989.12826.1 vs. uniprot
Match: A0A6H5KUH3_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH3_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.530e-13
Identity = 37/47 (78.72%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 MMGALDSLHRIFGAEGRAVAAARSVGLSALNVTGPVKRRLALHAMGG 47
            MMGALD LHR+FG++ RAVAAARS GLSALN  GP+KRRLA HAMGG
Sbjct:  429 MMGALDVLHRLFGSDARAVAAARSAGLSALNAAGPLKRRLARHAMGG 475          
BLAST of mRNA_H-paniculata_contig53989.12826.1 vs. uniprot
Match: D7G1J7_ECTSI (Ubiquinone Biosynthesis Monooxygenase COQ6 (C-terminal region) Ubiquinone Biosynthesis Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J7_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.540e-13
Identity = 37/47 (78.72%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 MMGALDSLHRIFGAEGRAVAAARSVGLSALNVTGPVKRRLALHAMGG 47
            MMGALD LHR+FG++ RAVAAARS GLSALN  GP+KRRLA HAMGG
Sbjct:  527 MMGALDVLHRLFGSDARAVAAARSAGLSALNAAGPLKRRLARHAMGG 573          
BLAST of mRNA_H-paniculata_contig53989.12826.1 vs. uniprot
Match: A4S3G5_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S3G5_OSTLU)

HSP 1 Score: 52.8 bits (125), Expect = 1.300e-6
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 MMGALDSLHRIFGAEGRAVAAARSVGLSALNVTGPVKRRLALHAMGGA 48
            MM ALD L ++F  +   VA ARS+GL+A+N TGPV+R++A +AMGGA
Sbjct:  464 MMAALDGLQKLFANDTYPVALARSLGLAAVNATGPVRRKIAWYAMGGA 511          
BLAST of mRNA_H-paniculata_contig53989.12826.1 vs. uniprot
Match: A0A7S0IF53_MICPS (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=3 Tax=Micromonas TaxID=38832 RepID=A0A7S0IF53_MICPS)

HSP 1 Score: 49.3 bits (116), Expect = 2.180e-5
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    1 MMGALDSLHRIFGAEGRAVAAARSVGLSALNVTGPVKRRLALHAMGGA 48
            MM ALD L R+F ++   VA AR  GL+ +N  GP++RR+A +AMGGA
Sbjct:  489 MMAALDGLQRLFASDQPLVAWARGAGLAGVNALGPIRRRIARYAMGGA 536          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53989.12826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KUH3_9PHAE1.530e-1378.72FAD_binding_3 domain-containing protein n=1 Tax=Ec... [more]
D7G1J7_ECTSI1.540e-1378.72Ubiquinone Biosynthesis Monooxygenase COQ6 (C-term... [more]
A4S3G5_OSTLU1.300e-656.25Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
A0A7S0IF53_MICPS2.180e-552.08Ubiquinone biosynthesis monooxygenase COQ6, mitoch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 1..50
e-value: 1.8E-5
score: 25.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig53989contigH-paniculata_contig53989:192..350 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig53989.12826.1mRNA_H-paniculata_contig53989.12826.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig53989 192..350 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig53989.12826.1 ID=prot_H-paniculata_contig53989.12826.1|Name=mRNA_H-paniculata_contig53989.12826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
MMGALDSLHRIFGAEGRAVAAARSVGLSALNVTGPVKRRLALHAMGGASG
GA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf