prot_H-paniculata_contig53987.12825.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig53987.12825.1
Unique Nameprot_H-paniculata_contig53987.12825.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
BLAST of mRNA_H-paniculata_contig53987.12825.1 vs. uniprot
Match: D8LI32_ECTSI (GRIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI32_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.430e-16
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 MSDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSEEVR 43
            + DPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSE+ R
Sbjct:  349 LQDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSEQER 391          
BLAST of mRNA_H-paniculata_contig53987.12825.1 vs. uniprot
Match: A0A7S2C3B8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3B8_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 8.430e-12
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    1 MSDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFS 39
            + DP+LQYLKNLMLKYL T+E EA+EHMERAI TVLQF+
Sbjct:   25 VEDPRLQYLKNLMLKYLCTEEYEAKEHMERAIMTVLQFT 63          
BLAST of mRNA_H-paniculata_contig53987.12825.1 vs. uniprot
Match: A0A7S2S2V8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2V8_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 4.080e-11
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 MSDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSE 40
            + DP+ QYLKNLM+KYL TDE EAREHMERA+ TVLQFS+
Sbjct:  386 LEDPRFQYLKNLMIKYLCTDEFEAREHMERAVMTVLQFSD 425          
BLAST of mRNA_H-paniculata_contig53987.12825.1 vs. uniprot
Match: A0A7S3NPJ7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPJ7_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 9.120e-7
Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    5 KLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSEE 41
            KLQYLKNLM KYL T + + REHMERAI  VL FS++
Sbjct:  462 KLQYLKNLMAKYLATAQAQPREHMERAIVMVLNFSDD 498          
BLAST of mRNA_H-paniculata_contig53987.12825.1 vs. uniprot
Match: A0A397FDV0_9STRA (GRIP domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FDV0_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.170e-6
Identity = 21/33 (63.64%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    7 QYLKNLMLKYLGTDEGEAREHMERAIATVLQFS 39
            +YLKN+++KY+ TD+ E +EHME+AIATVL FS
Sbjct:  103 EYLKNIVIKYMSTDQDEVKEHMEKAIATVLNFS 135          
BLAST of mRNA_H-paniculata_contig53987.12825.1 vs. uniprot
Match: A0A397DQM9_9STRA (GRIP domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DQM9_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.170e-6
Identity = 21/33 (63.64%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    7 QYLKNLMLKYLGTDEGEAREHMERAIATVLQFS 39
            +YLKN+++KY+ TD+ E +EHME+AIATVL FS
Sbjct:  103 EYLKNIVIKYMSTDQDEVKEHMEKAIATVLNFS 135          
BLAST of mRNA_H-paniculata_contig53987.12825.1 vs. uniprot
Match: A0A1V9YAK9_9STRA (GRIP domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAK9_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.250e-6
Identity = 22/33 (66.67%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    7 QYLKNLMLKYLGTDEGEAREHMERAIATVLQFS 39
            +YLKN+++KY+ TD  E +EHME+AIATVLQFS
Sbjct:  402 EYLKNIVVKYMSTDHAEVKEHMEKAIATVLQFS 434          
BLAST of mRNA_H-paniculata_contig53987.12825.1 vs. uniprot
Match: A0A3R8D3U7_9STRA (GRIP domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R8D3U7_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.290e-6
Identity = 21/33 (63.64%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    7 QYLKNLMLKYLGTDEGEAREHMERAIATVLQFS 39
            +YLKN+++KY+ TD+ E +EHME+AIATVL FS
Sbjct:  110 EYLKNIVIKYMSTDQDEVKEHMEKAIATVLNFS 142          
BLAST of mRNA_H-paniculata_contig53987.12825.1 vs. uniprot
Match: A0A835YNU9_9STRA (GRIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU9_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 2.330e-6
Identity = 24/39 (61.54%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    1 MSDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFS 39
            + + KL YL+NL+LKYLGTD+  AR +MERA+  VLQFS
Sbjct:  386 VDESKLPYLRNLLLKYLGTDDAIARANMERAMGVVLQFS 424          
BLAST of mRNA_H-paniculata_contig53987.12825.1 vs. uniprot
Match: W4GAX3_9STRA (GRIP domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAX3_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 3.190e-6
Identity = 21/33 (63.64%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    7 QYLKNLMLKYLGTDEGEAREHMERAIATVLQFS 39
            +YLKN+++KY+ TD+ E +EHME+AIATVL FS
Sbjct:  416 EYLKNIVIKYMSTDQDEVKEHMEKAIATVLNFS 448          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53987.12825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI32_ECTSI1.430e-1690.70GRIP domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2C3B8_9STRA8.430e-1276.92Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2S2V8_9STRA4.080e-1175.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3NPJ7_9STRA9.120e-767.57Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A397FDV0_9STRA1.170e-663.64GRIP domain-containing protein n=3 Tax=Aphanomyces... [more]
A0A397DQM9_9STRA1.170e-663.64GRIP domain-containing protein n=2 Tax=Aphanomyces... [more]
A0A1V9YAK9_9STRA1.250e-666.67GRIP domain-containing protein n=1 Tax=Achlya hypo... [more]
A0A3R8D3U7_9STRA1.290e-663.64GRIP domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A835YNU9_9STRA2.330e-661.54GRIP domain-containing protein n=1 Tax=Tribonema m... [more]
W4GAX3_9STRA3.190e-663.64GRIP domain-containing protein n=2 Tax=Aphanomyces... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.220.60coord: 2..43
e-value: 2.0E-5
score: 26.5
IPR000237GRIP domainPFAMPF01465GRIPcoord: 5..41
e-value: 3.3E-14
score: 52.5
IPR000237GRIP domainPROSITEPS50913GRIPcoord: 1..44
score: 10.958

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig53987contigH-paniculata_contig53987:907..1041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig53987.12825.1mRNA_H-paniculata_contig53987.12825.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig53987 907..1041 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig53987.12825.1 ID=prot_H-paniculata_contig53987.12825.1|Name=mRNA_H-paniculata_contig53987.12825.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
MSDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSEEVRC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000237GRIP_dom