prot_H-paniculata_contig53983.12823.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig53983.12823.1
Unique Name	prot_H-paniculata_contig53983.12823.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	190

Homology

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BLAST of mRNA_H-paniculata_contig53983.12823.1 vs. uniprot
Match: E6ZEQ5_ECTSI (Ribosomal protein S2 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZEQ5_ECTSI)

HSP 1 Score: 378 bits (971), Expect = 1.670e-132
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0

Query:    1 MFNKKHSRLFSLFIGSSGYLVPFPRNEYSQISKTLHPFLLGKRNIYSFYDLEKSLYGIRATIEVLKNIISSEGKILFIGDDVSMQSRFGQDSNINFLKWERGSITKSKDADLVLLTSVEKENLVEAHRKCLLLVGVGSSTMSRISYPFNLNIESPFLSDWFFGTVYTSCVQGKRMSKGSKKKNQIISLLG 190
            MFNKKHSRLFSLFIGSSGYLVPFPRNEYSQISKTLHPFLLGKRNIYSFYDLEKSLYGIRATIEVLKNIISSEGKILFIGDDVSMQSRFGQDSNINFLKWERGSITKSKDADLVLLTSVEKENLVEAHRKCLLLVGVGSSTMSRISYPFNLNIESPFLSDWFFGTVYTSCVQGKRMSKGSKKKNQIISLLG
Sbjct:    1 MFNKKHSRLFSLFIGSSGYLVPFPRNEYSQISKTLHPFLLGKRNIYSFYDLEKSLYGIRATIEVLKNIISSEGKILFIGDDVSMQSRFGQDSNINFLKWERGSITKSKDADLVLLTSVEKENLVEAHRKCLLLVGVGSSTMSRISYPFNLNIESPFLSDWFFGTVYTSCVQGKRMSKGSKKKNQIISLLG 190

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BLAST of mRNA_H-paniculata_contig53983.12823.1 vs. uniprot
Match: A0A089N0W8_PETFA (Ribosomal protein S2 n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089N0W8_PETFA)

HSP 1 Score: 269 bits (687), Expect = 2.200e-89
Identity = 132/190 (69.47%), Postives = 158/190 (83.16%), Query Frame = 0

Query:    1 MFNKKHSRLFSLFIGSSGYLVPFPRNEYSQISKTLHPFLLGKRNIYSFYDLEKSLYGIRATIEVLKNIISSEGKILFIGDDVSMQSRFGQDSNINFLKWERGSITKSKDADLVLLTSVEKENLVEAHRKCLLLVGVGSSTMSRISYPFNLNIESPFLSDWFFGTVYTSCVQGKRMSKGSKKKNQIISLLG 190
            M NKK +RL S FIGSSGYLVP P NEY +ISKT+HPF+LGKRNI+ FY+LEKSLYGIRAT+EV KNI+++EGKILFI +   +  RFG++ +IN +KW+RG++ KSK+ADLV L  VEKENLVEAHRKCLLLVGVGS TMS++SYPFNLNIESP LSDWFFG++YTS +QGK   K   KK+ I SLLG
Sbjct:    1 MLNKKQARLLSFFIGSSGYLVPRPYNEYVKISKTMHPFILGKRNIHYFYNLEKSLYGIRATMEVFKNIVATEGKILFISNSFPLHRRFGKEPDINCIKWKRGTLAKSKEADLVFLDGVEKENLVEAHRKCLLLVGVGSCTMSKVSYPFNLNIESPLLSDWFFGSIYTSYLQGK---KKKNKKSPINSLLG 187

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BLAST of mRNA_H-paniculata_contig53983.12823.1 vs. uniprot
Match: A0A0U1XD09_9PHAE (Ribosomal protein S2 n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XD09_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 2.910e-89
Identity = 133/190 (70.00%), Postives = 159/190 (83.68%), Query Frame = 0

Query:    1 MFNKKHSRLFSLFIGSSGYLVPFPRNEYSQISKTLHPFLLGKRNIYSFYDLEKSLYGIRATIEVLKNIISSEGKILFIGDDVSMQSRFGQDSNINFLKWERGSITKSKDADLVLLTSVEKENLVEAHRKCLLLVGVGSSTMSRISYPFNLNIESPFLSDWFFGTVYTSCVQGKRMSKGSKKKNQIISLLG 190
            M NKK +RL S FIGSSGYLVP P NEY +ISKT+HPFLLGKRNI+ FY+LEKSLYGIRAT+EV KNIIS+ G ILFI +   ++ RF ++ NIN ++W+RGSI+KSK+ADLV+L  VEKENL+EAHRKCLLLVG+GSSTMS+ISYPFNLNIESP +SDWF G +YTS +QG+R     KKK+QI SLLG
Sbjct:    1 MINKKQARLLSFFIGSSGYLVPRPYNEYVKISKTMHPFLLGKRNIHYFYNLEKSLYGIRATMEVFKNIISNGGNILFISNSSVLRQRFSKEPNINCIQWKRGSISKSKNADLVILDGVEKENLIEAHRKCLLLVGIGSSTMSKISYPFNLNIESPLISDWFLGVLYTSYIQGRR-----KKKSQIKSLLG 185

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BLAST of mRNA_H-paniculata_contig53983.12823.1 vs. uniprot
Match: A0A0U1XC74_SCYLO (Ribosomal protein S2 n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A0U1XC74_SCYLO)

HSP 1 Score: 268 bits (686), Expect = 2.910e-89
Identity = 131/190 (68.95%), Postives = 155/190 (81.58%), Query Frame = 0

Query:    1 MFNKKHSRLFSLFIGSSGYLVPFPRNEYSQISKTLHPFLLGKRNIYSFYDLEKSLYGIRATIEVLKNIISSEGKILFIGDDVSMQSRFGQDSNINFLKWERGSITKSKDADLVLLTSVEKENLVEAHRKCLLLVGVGSSTMSRISYPFNLNIESPFLSDWFFGTVYTSCVQGKRMSKGSKKKNQIISLLG 190
            M NKK +RL S FIGSSGYLVP P NEY +ISKT+HPF+LGKRNI+ FYDLEKSLYGIRAT+EV KNI++S GKILF+ +   ++ RF ++ NIN +KW+RGS+ KSKD DLV L  VEKENLVEAHRKCLLLVGVGS TMS+ISYPFNLN+ESP LSDWF G +YT+ +QGK+     KKK+ I SLLG
Sbjct:    1 MLNKKQARLLSFFIGSSGYLVPRPYNEYVKISKTMHPFILGKRNIHHFYDLEKSLYGIRATMEVFKNIVASGGKILFVSNSFPLRRRFAKEQNINCIKWKRGSLAKSKDVDLVFLDGVEKENLVEAHRKCLLLVGVGSPTMSKISYPFNLNLESPLLSDWFLGAIYTTYLQGKK-----KKKSSITSLLG 185

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BLAST of mRNA_H-paniculata_contig53983.12823.1 vs. uniprot
Match: A0A1I9LW48_9PHAE (Ribosomal protein S2 n=2 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW48_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 4.440e-88
Identity = 128/190 (67.37%), Postives = 158/190 (83.16%), Query Frame = 0

Query:    1 MFNKKHSRLFSLFIGSSGYLVPFPRNEYSQISKTLHPFLLGKRNIYSFYDLEKSLYGIRATIEVLKNIISSEGKILFIGDDVSMQSRFGQDSNINFLKWERGSITKSKDADLVLLTSVEKENLVEAHRKCLLLVGVGSSTMSRISYPFNLNIESPFLSDWFFGTVYTSCVQGKRMSKGSKKKNQIISLLG 190
            M NKK +RL  LFI  SGYLVP P N+Y +ISKT+HPFL+GKR+IY FY+LEKSLYGIRAT+EV KNI+++EGKILFI D + +QS F +D NI+ +KW+RGSI KSK+ADLV L+++ KEN+VEAHRKCLLLVG+GS TMS+I+YPFNLN++S FLSDWFFG +YTS VQGKR+S  SK     +SLLG
Sbjct:    1 MLNKKDARLLFLFIRYSGYLVPRPLNDYVKISKTMHPFLVGKRDIYYFYELEKSLYGIRATLEVFKNIVANEGKILFISDSLPLQSCFSRDPNIDCIKWKRGSILKSKNADLVFLSNINKENMVEAHRKCLLLVGLGSPTMSKIAYPFNLNLDSSFLSDWFFGAIYTSYVQGKRLSNKSKNXXXXLSLLG 190

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BLAST of mRNA_H-paniculata_contig53983.12823.1 vs. uniprot
Match: Q94Z20_PYLLI (Ribosomal protein S2 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94Z20_PYLLI)

HSP 1 Score: 264 bits (675), Expect = 1.930e-87
Identity = 126/190 (66.32%), Postives = 156/190 (82.11%), Query Frame = 0

Query:    1 MFNKKHSRLFSLFIGSSGYLVPFPRNEYSQISKTLHPFLLGKRNIYSFYDLEKSLYGIRATIEVLKNIISSEGKILFIGDDVSMQSRFGQDSNINFLKWERGSITKSKDADLVLLTSVEKENLVEAHRKCLLLVGVGSSTMSRISYPFNLNIESPFLSDWFFGTVYTSCVQGKRMSKGSKKKNQIISLLG 190
            M NKKH RL S FIGSSGYLVP P+NEY +ISKT+H +LLGKRN + FY+LEKSLYGIRAT+EV KNI++ EGKIL I + ++++SRF  +SNIN+LKW+RGS++KS+D DLV L+ V +ENLVEAHRKCLLL GVGSSTMS+I+YP NLNIESP LSDWF G +YTS +QG++M K  K    ++ LLG
Sbjct:    1 MVNKKHERLLSFFIGSSGYLVPRPQNEYVKISKTMHCYLLGKRNNFYFYNLEKSLYGIRATLEVFKNIVAKEGKILLISNSLTLESRFALESNINYLKWKRGSLSKSQDVDLVFLSGVNRENLVEAHRKCLLLSGVGSSTMSKIAYPVNLNIESPLLSDWFLGALYTSYIQGQKMKKTRKTSLPVVRLLG 190

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BLAST of mRNA_H-paniculata_contig53983.12823.1 vs. uniprot
Match: A0A3G5FPL4_9PHAE (Ribosomal protein S2 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPL4_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 6.620e-87
Identity = 130/190 (68.42%), Postives = 153/190 (80.53%), Query Frame = 0

Query:    1 MFNKKHSRLFSLFIGSSGYLVPFPRNEYSQISKTLHPFLLGKRNIYSFYDLEKSLYGIRATIEVLKNIISSEGKILFIGDDVSMQSRFGQDSNINFLKWERGSITKSKDADLVLLTSVEKENLVEAHRKCLLLVGVGSSTMSRISYPFNLNIESPFLSDWFFGTVYTSCVQGKRMSKGSKKKNQIISLLG 190
            M NKKH+RL SLF+G SGYLVP P NEY +ISKT++PFLLGKRNIY FYDLEKSLYGIRAT+EVLKNI+++EGK+LFI D   + SRF   +N+N +KW+RGS+ KSK+ADLV L+ VEKENLVEAHRKCLLLVG+GSSTMS+ISYPFNLN  SP LSDW FG +  SCV+G R  +   KK  I   LG
Sbjct:    1 MLNKKHARLISLFVGYSGYLVPRPYNEYVKISKTIYPFLLGKRNIYYFYDLEKSLYGIRATMEVLKNIVANEGKVLFISDSPVLHSRFNLGANLNCIKWKRGSLAKSKNADLVFLSGVEKENLVEAHRKCLLLVGIGSSTMSKISYPFNLNCNSPLLSDWLFGALSISCVRGLRELR---KKRPIPKFLG 187

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BLAST of mRNA_H-paniculata_contig53983.12823.1 vs. uniprot
Match: A0A4D6E4R0_9PHAE (Ribosomal protein S2 n=1 Tax=Nereocystis luetkeana TaxID=117523 RepID=A0A4D6E4R0_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 1.210e-83
Identity = 126/190 (66.32%), Postives = 151/190 (79.47%), Query Frame = 0

Query:    1 MFNKKHSRLFSLFIGSSGYLVPFPRNEYSQISKTLHPFLLGKRNIYSFYDLEKSLYGIRATIEVLKNIISSEGKILFIGDDVSMQSRFGQDSNINFLKWERGSITKSKDADLVLLTSVEKENLVEAHRKCLLLVGVGSSTMSRISYPFNLNIESPFLSDWFFGTVYTSCVQGKRMSKGSKKKNQIISLLG 190
            M   +HSRL S  IGSSGYLVP P NE   ISKT+HP+LLGKRNIY FY+LEKSLYGIRAT+EVLKNIIS+EGKILF+ D   ++     +SNI+++KW+R  + KSKDADLV+L+++EKENLVEAHRKCLLLVGVGS TMS++SYPFNLNIESP LS WFF  +Y +CV+  RM K  KK+    SLLG
Sbjct:    1 MIRTEHSRLISFLIGSSGYLVPRPFNEDVLISKTMHPYLLGKRNIYYFYNLEKSLYGIRATLEVLKNIISAEGKILFVSDSPLLKICISHESNISYIKWKRSYLAKSKDADLVVLSNIEKENLVEAHRKCLLLVGVGSPTMSKVSYPFNLNIESPLLSSWFFSLIYMTCVRSNRM-KSKKKRRVFSSLLG 189

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BLAST of mRNA_H-paniculata_contig53983.12823.1 vs. uniprot
Match: A0A2H4ZR15_9PHAE (Ribosomal protein S2 n=2 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A2H4ZR15_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 1.330e-83
Identity = 128/190 (67.37%), Postives = 151/190 (79.47%), Query Frame = 0

Query:    1 MFNKKHSRLFSLFIGSSGYLVPFPRNEYSQISKTLHPFLLGKRNIYSFYDLEKSLYGIRATIEVLKNIISSEGKILFIGDDVSMQSRFGQDSNINFLKWERGSITKSKDADLVLLTSVEKENLVEAHRKCLLLVGVGSSTMSRISYPFNLNIESPFLSDWFFGTVYTSCVQGKRMSKGSKKKNQIISLLG 190
            M NK  +RL S  IGSSGYLVP P NEY +ISKT+HPF+LGKRNI+ FY+LEKS+YGIRAT+EV KNIIS+EGK LFI +   +  RF ++ NIN +KW+RG + KSKDADLV L  VEKENLVEAHRKCLLLVGVGS TMS+ISYPFNLNIES  L+DWFFG +YTS ++GK   K   K++ I SLLG
Sbjct:    1 MKNKNQARLLSFLIGSSGYLVPRPYNEYVKISKTMHPFILGKRNIHYFYNLEKSVYGIRATMEVFKNIISNEGKTLFISNSFPLSQRFVKEPNINCIKWKRGVLAKSKDADLVFLDGVEKENLVEAHRKCLLLVGVGSPTMSKISYPFNLNIESSLLTDWFFGIIYTSYLKGKEKKK---KRSPINSLLG 187

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BLAST of mRNA_H-paniculata_contig53983.12823.1 vs. uniprot
Match: A0A8F0FDQ0_9PHAE (Ribosomal protein S2 n=9 Tax=Alariaceae TaxID=2887 RepID=A0A8F0FDQ0_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 6.090e-82
Identity = 124/190 (65.26%), Postives = 147/190 (77.37%), Query Frame = 0

Query:    1 MFNKKHSRLFSLFIGSSGYLVPFPRNEYSQISKTLHPFLLGKRNIYSFYDLEKSLYGIRATIEVLKNIISSEGKILFIGDDVSMQSRFGQDSNINFLKWERGSITKSKDADLVLLTSVEKENLVEAHRKCLLLVGVGSSTMSRISYPFNLNIESPFLSDWFFGTVYTSCVQGKRMSKGSKKKNQIISLLG 190
            M   +HSRL S  IGSSGYLVP P NEY +ISKT+HP+LLGKRNIY FY+LEKSLYGIRAT+EVLKNII SEGKILFI D   ++     + NI+++KW+R  + KSKD DLV L+ +EKENLVEAHRKCLLLVGVGS TMS++SYPFNLNIESP L+ WFF  +Y +CV+  RM K  K+     SLLG
Sbjct:    1 MVKTEHSRLLSFLIGSSGYLVPRPFNEYVRISKTIHPYLLGKRNIYYFYNLEKSLYGIRATLEVLKNIILSEGKILFISDSPLLKICLSHEPNISYIKWKRSYLAKSKDVDLVFLSDIEKENLVEAHRKCLLLVGVGSPTMSKVSYPFNLNIESPLLASWFFSLIYITCVKSNRM-KSKKQGRTFSSLLG 189

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig53983.12823.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig53983.12823.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
E6ZEQ5_ECTSI	1.670e-132	100.00	Ribosomal protein S2 n=2 Tax=Ectocarpus siliculosu...	[more]
A0A089N0W8_PETFA	2.200e-89	69.47	Ribosomal protein S2 n=1 Tax=Petalonia fascia TaxI...	[more]
A0A0U1XD09_9PHAE	2.910e-89	70.00	Ribosomal protein S2 n=1 Tax=Colpomenia peregrina ...	[more]
A0A0U1XC74_SCYLO	2.910e-89	68.95	Ribosomal protein S2 n=1 Tax=Scytosiphon lomentari...	[more]
A0A1I9LW48_9PHAE	4.440e-88	67.37	Ribosomal protein S2 n=2 Tax=Pleurocladia lacustri...	[more]
Q94Z20_PYLLI	1.930e-87	66.32	Ribosomal protein S2 n=1 Tax=Pylaiella littoralis ...	[more]
A0A3G5FPL4_9PHAE	6.620e-87	68.42	Ribosomal protein S2 n=1 Tax=Cladosiphon okamuranu...	[more]
A0A4D6E4R0_9PHAE	1.210e-83	66.32	Ribosomal protein S2 n=1 Tax=Nereocystis luetkeana...	[more]
A0A2H4ZR15_9PHAE	1.330e-83	67.37	Ribosomal protein S2 n=2 Tax=Endarachne binghamiae...	[more]
A0A8F0FDQ0_9PHAE	6.090e-82	65.26	Ribosomal protein S2 n=9 Tax=Alariaceae TaxID=2887...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.10490		coord: 26..175 e-value: 7.1E-7 score: 30.5
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..190
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 9..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..8
IPR023591	Ribosomal protein S2, flavodoxin-like domain superfamily	SUPERFAMILY	52313	Ribosomal protein S2	coord: 29..173

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig53983	contig	H-paniculata_contig53983:595..1164 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig53983.12823.1	mRNA_H-paniculata_contig53983.12823.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig53983 595..1164 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig53983.12823.1 ID=prot_H-paniculata_contig53983.12823.1|Name=mRNA_H-paniculata_contig53983.12823.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp
MFNKKHSRLFSLFIGSSGYLVPFPRNEYSQISKTLHPFLLGKRNIYSFYD
LEKSLYGIRATIEVLKNIISSEGKILFIGDDVSMQSRFGQDSNINFLKWE
RGSITKSKDADLVLLTSVEKENLVEAHRKCLLLVGVGSSTMSRISYPFNL
NIESPFLSDWFFGTVYTSCVQGKRMSKGSKKKNQIISLLG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023591	Ribosomal_S2_flav_dom_sf