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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 849 |
| Cds size | 846 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5396.12820.1 >prot_H-paniculata_contig5396.12820.1 ID=prot_H-paniculata_contig5396.12820.1|Name=mRNA_H-paniculata_contig5396.12820.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp
SSAEEEAVAAAAVAAVGLGRTEEGEGRGGTDTASGSDSKSVHSGSSAEEG
REGEVSGFGFKSAGLPPAAAAPIMGISEATAASAAALDIGERAGGGSGDG
DVAVLNAERLVQEDEREAAALALRSNTNVNANVNAHATGSTGGGSASGRP
RVVPPVSGGGRGGGRGIAEVGGTSGIPPMSRPGGTVAGRGLNVGSGGSPF
HSSAGTESFATTDFEGSDYDNSDTPKAALGTRAAKAGGAEATKMQYKQSK
RRAQISQEAGFKLDTGRDGQVVVVPVGLRLGR back to topmRNA from alignment at H-paniculata_contig5396:1640..8998+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5396.12820.1 ID=mRNA_H-paniculata_contig5396.12820.1|Name=mRNA_H-paniculata_contig5396.12820.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7359bp|location=Sequence derived from alignment at H-paniculata_contig5396:1640..8998+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCGTCGGCGGAGGAGGAAGCAGTGGCCGCAGCAGCGGTGGCGGCGGTGGG
TTTGGGCAGGACAGAAGAGGGGGAAGGAAGAGGAGGAACTGATACTGCTT
CTGGTTCTGATTCGAAGAGTGTTCATTCGGGTAGTTCTGCTGAGGAAGGA
CGAGAAGGAGAAGTGTCGGGTTTTGGTTTCAAGAGTGCTGGTTTACCGCC
TGCCGCTGCTGCACCAATCATGGGTATTTCAGAGGCGACTGCGGCTTCTG
CTGCTGCGCTTGATATCGGCGAACGAGCAGGTGGCGTTTTGTCTTTGTGG
AGGTGGGGGGTCGGGATTGGGCTTATTAGAGGGTTTGACATAAGGCAGCA
GGGGGGAGATGGGGGGGGTTAGATGGTATGCAGAGTGTATGTTCCTCATT
GTCAAGCGGGGGGGGGGGGGGAGCTATAGGATGAATGCCTTGTAAGTGGA
GGTTATTGGTTGATATAGTCATGGCTATACGAGGTTTTGCCCATGAGCAA
TTTTGAAATTAGTAAATAATAGGGCTAATTATTTATGGCTGACTTCTAAA
GCCTGAATGAATCAGAATTGGCAGCAGCTAGCCTGTGAAGTAGTGTCTAT
TCGGCAGATTCTCCAAAAGACAATCAATCCATCGGTTCGTTATTGGTTAC
TGGTTATTGGTTGTTGGTATGGAACCGTTTCAACTAAAGGGGCGGGGCAA
ACATCAATTTTCGATGAAGGTGTCTTGATTTTCGTGTGGGATCATTCCGG
AACAGTTTGTTTTTTTGCCGTTCAAGTTTTTACGTCTTGGTAACATGTAA
GTAGCGTACTCGACCGATGCTTTGCCTTGGGCATAGTGCAAATGTTGCAC
CCCCCCCAGACAAATACGAATACTTGCAAATGTTTTTTACAATAAACAGA
AAGTATTCGCCTGAGTTACAGAATGAGCTCATGTATCGTTCTATGTGCCC
CCGGCCATTCACGACTGCTAATAATACTCGTAAATTGAAAGCACATGGGT
GAGTACTTTGTTCTATTTGTCTGCTTGTCCTGAACTCAGGCAGATATTTT
TGTTTTTTTTGGGAAAATTATTTGCAAGTATTCGTATTTGTCCAGGGGGT
GAAATATCAGTGCCGAAGGTCAGGTCCGCTTTTGAACTGTTCACGCGCTT
AGCTTGAAACGTAAAGCTTGTCAACGTGTAGTTATTATCTACTTTGTGTG
GGACTGTTTAGCTGCTTGCACTGCTAGATGTATCGTTTGTCCAGATAGAA
CTGTCGCGTTTAACCCTTGGGGGGGCTCACACCTCGCGAGTATATTTTTA
CGGCATCCTCTTTTCTGGCCATTTGTTTTCGATGGCAAAAGGGGCGTACA
CATAAGTGGAAGGAGTGATATCTCGTCCCTCCTATCTGAGAAGAACATCG
GCGAAGGTGCACCAGTAGATGATTCGCGCTCATATTGCACGCCCCGAGGG
GGTTATAAACGCTCGCACCTCGCGAGTATTTACCTCCGGTTTTCACTGTA
TCACTGACATATGTCAGTTTTGCGCTAGAATTGTATAATTCGGGAGAGAC
CGTAAAACAACCCTCCTTTACTAAAATTTCCCTGCCACAGTCAGCTAAAG
TATGACTCTAAGGGTTAGGGTTACATATTTATGCACTTGGTGTTAATCTG
CACTTGGTGTTGAATTTTATCAGCTAAATCAGATTGATGACTAGTAAGCA
GGTAGTAAAACGTAAGGGATCAAACCTCTTTGGGGTCGTTTTTTTTGTTT
TTTTTAAGCCAAACGATTAATGATGGGGTTACAGTATACCGCTGCCAACG
ACGACGAATCACACAACCAGTTAATTTTTTTCTCAGAGGTGAGATGAATC
AACCCGCACAACCCCCCCCCCCGAGAATGCACATTAAGACATGTGTGTCA
TTTGCAAGAATTAACTATTCGCGTAACGACTGAAATGAAAAGTTCAACAC
ACACATATATATCAGTGTGAGTGAAGTAGCATGCTCGCACAAGATTTTTT
TCGACAAAAGAAAATTAGTAGCTGTTACATGAAAAAATGGGACATGCGAA
TACGATTTCATCATATTTCATCATATTGCCCTCCACCTTGTTCCACCAAA
CAGTAAGTACAACAGGTCAGTACCGTTTGTAAAATATAAAAAAAATAAAA
AAAAATGCGCTGAACGATAAGATCCATTTGATATCATTTGATTTCTAACA
TCTCCATCTCAGTCTTGAGCTTTGTCAGAAAAAATTTCGACGCGCGGTTA
TGACAGCCCCGCGTCGAAATAGGGAGGCGGGGGTACCGAATTTCGAGAGA
CAGAATTGTTTTTTTTCGGGTTTAGATCAGATCCGCGTGTCGGCAAACAG
CGGGATTGTGACTTGTTTTGGTGATCTATAGTGTATCCATTTAGAGTGTC
AGATATGGACACTAGGTGTAAATGAGTGTCGGCTTTTTTACAATATTTAC
GTACGTCAAGGGCTGGCACAGCAGCCGGAGTGCCTTTCGCTTGGTGTTAC
AGTATTGCAACTGGCAGGTGACGGTACATCAGTTGGTGTACTATTGCATG
CAATGCCATTTCTGTGGCAGTTGGCTGGCACCAGCATATCCCGTGAGTTC
CGTGTCGAATCATGGTCGCTGCGTGTGCGGTCTTCTGTCAGGACAAGCAG
TGTCCACAGGCACAGCAGCAGGCATTCTACGACAGTCGTGGTGGTTGGGA
CGTGACAACATGACTGATGTCTAGTGAAGTTGGCTCTTAGGCGTTGGGGG
TCCCTGAAACAAAGTTGTTTCTACCTGTAGCTTTTTCTTTTCCCCAGGTG
TAAAGGAGTTACAGGTGATGAAGTGAGGTGCACAACTTCAACATCGATGC
TTGACTCCTCCCTTCCTCACGCCCTCTTTGGAGTAGGACTAGGTATAGGT
ACGAACGCGCGACTGGCTAGTTTCCATCGGAAATCGCTCCGATAGAAGCA
AAGCTCTGTCCTCCCGAGTATGCGTAGTCATTGGTCTAATAGGTGCGACA
TGCAGAACACGAGTTCGCCCCCCCCCCCCTGTTGGTCATTATCAAATTTT
GCAGATAAGTCTATACAACTGCAGATGAACGTTAGCTGCACATATATATA
TAACTAATTAATCTCAGGCGGTGGCAGCGGAGACGGGGATGTGGCTGTTT
TGAACGCGGAGAGATTGGTGCAAGAAGATGAGAGGGAGGCGGCAGCGCTC
GCGCTGCGAAGTAACACCAACGTTAACGCTAATGTCAATGCCCATGCTAC
TGGATCAACGGGTGGAGGCTCCGCGAGCGGCCGTCCTCGGGTGGTTCCTC
CCGTTTCCGGTGGTGGACGAGGTGGGGGAAGAGGGATTGCGGAAGTGGGG
GGCACTTCGGGGATACCCCCGATGTCTAGACCTGGAGGAACTGTGGCGGG
CAGGTGCGGGATGGGTGGTGGTGTGATGGGTGTGCAGATGACGTTTGTTT
TGATGTGGAGCAAAGTTGAGTGGCGTGAGATTGAGGAAGGCTGTTGCCTG
CTGTTTCAATTAAGTGAAGGAGGGTGCTGAAGTGACCCCCTGTGGCGCCA
AAGCCCCACAAGAATAATGACATTACTTGACAGTCCCGCAGCGAAACCGC
CTCGATGAGGGGGGGGGGTCTGAATTTAAGTCAGGTATACCCCGCTGGCG
TAGCTGTGGCCTGTATAGTTTGTCTAGTATGTAGAGTACCGATACGACAG
TTATGCCGATACCCATAGTGACTGACTGCCTCTACTAATTTTGTTTCGTC
GGGGAACAGGGGGCTCAACGTAGGGTCGGGAGGATCACCGTTCCACTCTT
CCGCGGGAACGGAGTCATTTGCCACGACCGACTTTGAGGGATCCGACTAC
GATAACAGCGATACCCCCAAGGCGGCATTGGGAACGAGGGCCGCGAAGGC
GGGAGGAGCGGAGGCGACGAAGATGCAGTACAAACAGTCGAAGCGGCGAG
CACAGATTTCGCAGGTTGGTTGGTTCAGTGGTGGGTTGTCGCGGTTCTAT
TAAGTACGGTTTACTCTGGTTTGGTCCGTCTGGTCTATTCTTATTTGGCA
TGATTTAATTTTGATCTTAACAAAGGAGGTACAGTACGAATTTGTTCTTT
CGGATTTGGTTTGGTTTGATGTAATTTCAGTACGGCACGGGTCCGGACCG
GACCGGACCGGACCAGTCCGGACTGTTTTTGTGTGACGTATGTTATCCTA
CTCGCAGCCTTTACCATCGCACCTCCTCCCTACCCCGCTATTGCAGCGAA
GGAGTTATTTGCCGTTTGCACCGGGTGCGTCATCACATCCGGCCCCCTCG
AAAATGCGCACGTACCCAACTCGATTTTGAGAACGCGGTGCTACGATTGA
TTGATGAATCGATCCACGCAGCCCCCCCCCCCCCCGATTGACCTTTGAAC
ACTAGGCACTCATCGTGCTGTATTACTAAAAGCGGCTTTTGCGTCAGTCA
TTTCCCTTATGTGTTCCGTTTGTGAATATAGCGAGGTACTCAAAATTGTT
GAAATTACTGATTACATGTCTGTACCTGTACCGTACGTCCTACTCCAATT
TGTTCGGTTGGGGGAATAATCTCCCTTCCCTCCGCCACCGTCGCCGCCGC
CTCATCTCCTTCATGTGTACAATACAGAGCTTTAATGTTTCTTCTCTGTA
GTAGTTAGTCAAATATATTCAACATACGGTTTCCACTGTAGTTAGTCGGA
TGTGTAATGTGTAATGTAGCTCATTTCAATGTATATATTCATGGATAGTG
AAGCTTGGAGAGGGTGCCGTGGAGGGAAGCGTTCTCTTTTCGGGGTAGAT
TTTTCCGAAAGGCATGGTATGTAGTCACACCAAAAGTTGGTTGGTTGTGA
AGATTTATTCGAGATCTGGCGATACAACTAGTGCAGGTCCTTGTCCTCTT
TCAAATAGTGCACGTCCTTGCTTTTAGGCAAAGTTGACCTTGAAAAATGA
CCCCCCCCCCCCTCCCCCAGGGGCGTTCTCTCCGACCTTCACAAGTAACA
CAAACATTCCACCCTCCGGATGGCTATCAATTGGCCTAGTTGCGAATGTT
TATGGAACACGGCGATGGACTGGAACAGGTACACGTTGATGTTAATCGGA
CTAAAGCAGATACAATTATGGTGCAGTCGCGCGAGCACAAAAAACCGACA
CGGAGACAATGTACAGACAGTACCGTACAATGGGTATGCGAACAAGAACA
ATATATCTTCAACAACAGTACACGCAGCGAAAGCACAAACCCCAGAGTGA
GCTTCGGGAAGAATTGCTGGTCCAAGGCCCTCCACACCACGTACAACAGC
ACTGCGTGTAGCGAGCGTGCGCACTATGTGTGTAGTCTGCATGACGTGTA
ACTCGGATGCAACTGTATATCTATGTAATTATCTATGTATATATATTGGT
GCCTTCATTTTCTCGGGCACTGCTTACATACAGCACTCATACCTTGCGAA
GTACCTATTACATTCATGTTGACACGGTACGTTTGATGCGGTTGATGCCC
TCTTTACGACCAAGCAATCCGTCATGTCCTGAGTTTTTTGGTCAATATTG
GTCGCTGACTTGGACATTCTGTGTTCTCTTCCTCGTGTGGTCTCTCATCT
CTTGTATGTTTTCTGTTGTCTGTACTGTACCCGCTTTAAAATCGATAGAA
TATGGTCCGACACCCGTTCTATTCCATGGATCATCTGTTAAGTCATGTAC
GCTCAGAACGTGCTCTGCATCCATACTGTACTACTACTTGACAAAAGTAA
AACGGACACCATGTGTTCAGTTAGTGCGTGATGGACTACTCAGAGTGGCC
AGTCAACCTCGAAGTAATGGTATTGTCAATCATCTCGTTGTACTATTCGT
TGTTTGACATCACCCCGTCCTATTTATTACCTGAACGTAGTCACACTGCA
GTGTCATAGACAGGTATCTGCGCTACGCTTCGTTTCCATTTCCGTTCATG
TACATGTGAATTCACTCCAACAGGGCATCGGGGTTTCGCGGCCAAACATT
TCCCAGCATGTTTATTCAACATGGTTTACATACATACATACACATGATAG
ATGCACAGTGCCTGTAGTAGTGTTTGCATACGTATTCGTGATTTATGCAT
GTTGTGTGTGCCGTATATTGCGGAAACTAACCTATTAAATTACTGCCGGC
GCACCTGGAGAGTGGGGGGGGCATCGAGTTACCCGTCCGTGGCCATACGG
TCTCTCTCTCTGCCTCTCCGAGAGAAATGGCGAGCGAGGTGCACAGAGTG
TTTTGTGTGTGACACGCCAGTGTATTGTTGCCTCTTTGTATTTCTCCCAT
GAGAGGTATACGTTTATCCCGAAATCACTGGAGTTCGCTACCCTGCGTGC
ATGGCAATGGCGTTAGTGTCGGCCCAATTCTCCCATATTTGTGAACAAAC
CGCAGCAACACAGCTTTAGTACGGTTGTTTATCCGTCACGAAACGGCTTG
AAGAAGCGGTTTCTTTTTGTGTATCCATGGTTGGTATTTTATTTCCGACT
CTAAAAGTTCCGAGAATAGTATGTTGGGAAGTTGGGCCGTTTATTGGATC
AGTGGCAAAGATCCACGTATCATGGTTGGTGTTTGGGTGCGCGGGTCTAT
GGTGCACAAGTTTGACCCAGACAGGTACAAATGATCGAAGTTAGACGAAA
ACAGTTGTTCTGGTGGGGACTAGAATAGGCGACGACCAGTTTCTTTGGCT
GTGGTCAGACTACCTGGTTAAACCGTGGACTAAGGCAGGTACATTGTCTC
ATTGGTGGAAAGTTCGAATTTGCAATTGGTAGTTTGAGGCGAGGATGGTA
TTGATGTTGAGTTTTTATGTCGGGGAAGTGTTGCAATGACCCAACAATGA
CTGAGGTATGTGCATGCAAAAAAGCTAACGTAAAACGGTGGTCTGTATCG
TTTTTTTTTGTGCTTCCGCCACTGTAACCGTAATTGTCCCAAAGATCCTG
AAGTGTACCTGTTTGAGTCCATTACACTTGAACAAATAGTAGTCACCTGA
GTTTCAGAATATGTGGAATGGATGATAACACATAAAATAGAGTGTTGGTC
GTCTGTTTTTTCGTTTTTCCAGTATTCGGAGCAATCGTTGATGGTCCGGG
GCATATGAAACTAAAGTGCTTCCGTTGGAATTCCAGCGACTATTTTTTTG
AATGGTCCCAACTAGTTGCAGTCGTTCGTCCAGGGGGGTACAACATTCCA
AGTCATTTTCAACTCTTCTTCTGTTCGTTTCTCTATCTCTATCTCTATCT
TTGTTTGTCTTTCTGTCTGTCCGTTAATACAGGAGGCGGGCTTCAAGCTA
GACACCGGGCGCGACGGGCAGGTAGTCGTCGTTCCAGTGGGATTAAGACT
GGGTCGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5396:1640..8998+ >mRNA_H-paniculata_contig5396.12820.1 ID=mRNA_H-paniculata_contig5396.12820.1|Name=mRNA_H-paniculata_contig5396.12820.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1692bp|location=Sequence derived from alignment at H-paniculata_contig5396:1640..8998+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCGTCGGCGGAGGAGGAAGCAGTGGCCGCAGCAGCGGTGGCGGCGGTGGG
TTTGGGCAGGACAGAAGAGGGGGAAGGAAGAGGAGGAACTGATACTGCTT
CTGGTTCTGATTCGAAGAGTGTTCATTCGGGTAGTTCTGCTGAGGAAGGA
CGAGAAGGAGAAGTGTCGGGTTTTGGTTTCAAGAGTGCTGGTTTACCGCC
TGCCGCTGCTGCACCAATCATGGGTATTTCAGAGGCGACTGCGGCTTCTG
CTGCTGCGCTTGATATCGGCGAACGAGCAGTCGTCGGCGGAGGAGGAAGC
AGTGGCCGCAGCAGCGGTGGCGGCGGTGGGTTTGGGCAGGACAGAAGAGG
GGGAAGGAAGAGGAGGAACTGATACTGCTTCTGGTTCTGATTCGAAGAGT
GTTCATTCGGGTAGTTCTGCTGAGGAAGGACGAGAAGGAGAAGTGTCGGG
TTTTGGTTTCAAGAGTGCTGGTTTACCGCCTGCCGCTGCTGCACCAATCA
TGGGTATTTCAGAGGCGACTGCGGCTTCTGCTGCTGCGCTTGATATCGGC
GAACGAGCAGGCGGTGGCAGCGGAGACGGGGATGTGGCTGTTTTGAACGC
GGAGAGATTGGTGCAAGAAGATGAGAGGGAGGCGGCAGCGCTCGCGCTGC
GAAGTAACACCAACGTTAACGCTAATGTCAATGCCCATGCTACTGGATCA
ACGGGTGGAGGCTCCGCGAGCGGCCGTCCTCGGGTGGTTCCTCCCGTTTC
CGGTGGTGGACGAGGTGGGGGAAGAGGGATTGCGGAAGTGGGGGGCACTT
CGGGGATACCCCCGATGTCTAGACCTGGAGGAACTGTGGCGGGCAGGCGG
TGGCAGCGGAGACGGGGATGTGGCTGTTTTGAACGCGGAGAGATTGGTGC
AAGAAGATGAGAGGGAGGCGGCAGCGCTCGCGCTGCGAAGTAACACCAAC
GTTAACGCTAATGTCAATGCCCATGCTACTGGATCAACGGGTGGAGGCTC
CGCGAGCGGCCGTCCTCGGGTGGTTCCTCCCGTTTCCGGTGGTGGACGAG
GTGGGGGAAGAGGGATTGCGGAAGTGGGGGGCACTTCGGGGATACCCCCG
ATGTCTAGACCTGGAGGAACTGTGGCGGGCAGGGGGCTCAACGTAGGGTC
GGGAGGATCACCGTTCCACTCTTCCGCGGGAACGGAGTCATTTGCCACGA
CCGACTTTGAGGGATCCGACTACGATAACAGCGATACCCCCAAGGCGGCA
TTGGGAACGAGGGCCGCGAAGGCGGGAGGAGCGGAGGCGACGAAGATGCA
GTACAAACAGTCGAAGCGGCGAGCACAGATTTCGCAGGGGGCTCAACGTA
GGGTCGGGAGGATCACCGTTCCACTCTTCCGCGGGAACGGAGTCATTTGC
CACGACCGACTTTGAGGGATCCGACTACGATAACAGCGATACCCCCAAGG
CGGCATTGGGAACGAGGGCCGCGAAGGCGGGAGGAGCGGAGGCGACGAAG
ATGCAGTACAAACAGTCGAAGCGGCGAGCACAGATTTCGCAGGAGGCGGG
CTTCAAGCTAGACACCGGGCGCGACGGGCAGGTAGTCGTCGTTCCAGTGG
GATTAAGACTGGGTCGGGAGGCGGGCTTCAAGCTAGACACCGGGCGCGAC
GGGCAGGTAGTCGTCGTTCCAGTGGGATTAAGACTGGGTCGG back to top
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