prot_H-paniculata_contig5392.12817.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5392.12817.1
Unique Nameprot_H-paniculata_contig5392.12817.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length631
Homology
BLAST of mRNA_H-paniculata_contig5392.12817.1 vs. uniprot
Match: D8LKF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF9_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 5.160e-114
Identity = 291/674 (43.18%), Postives = 353/674 (52.37%), Query Frame = 0
Query:    1 VAGTTRPSPEPQPATIDRWARGWIMSRSTKARGQDSLDR--MSDDGSXXXXXXXXXXXXXXXXSACALGTRSAQRESR----------HNQKVQQEAVPKPFPLGPELEEGQRDPPEGGNMPLDNQGRDRNGRGDSLSWSGEGG--------KSGEGVKKGDIGNAIKVGY----------RNRDTAGWFLRPDLGGREWTIDAAGELLVLDRPQGDTLPGTLVSASYAFRDVVDDCATTEVGGAG----GDAATDEWEARRTGMGGRGANKRSSISSCWARDTSRASVSRRASGRRISRRYS---RRGANNRFFALEPTLQPNLTTSLGRPGPGVSVCDGNSIKEGPEWPQDPNHMSWGEYRQRQRKTDSMSSLNAFGGNNNTDETDVSTLGFSLGSIQSAPAQIAQRETLSQNSAGGGSGCGGHNRGQNXXXXXXXXXXXXXXHSFTAFDNIDPLDGGVRVARATSSPPRNMQSARFGKGYRAPGPLSPLSMSVGDDGAGAGGXGAAGPEWIGDDDDSRDPHLQLLQEPEWKTGTQGQARKAGLLPKIKQHSRERPLTHERPNTRNPRDPPNVPARSQAHSSPKKIGGSGSQQPASWEGRQVTADDSDSIGGST--SFSSLPMSLMGWG--ADGAAIGRSGGMKSEHRRAE---GTITMNKPRELIAQGFLR 630
            +AGT  PSPEP+   IDRWARGW+ SR T  R  D   R   SDDGS                 + A G  SA R             H+   ++++   PFPL PE+ E Q  PP    +P  +    R G GDS +  G GG          GEG ++   G   + G           R  D     L+ DLGGREWTID AGELL++DR QGD +P T+VSA Y FRDV D  A  E GG G         D  +  R G G        S S+ ++++  R+S+S R + R          RR  +  FF LEPTLQPNL  SL RPGPGVSV DG S+KEGP WPQDP HMS  EYR+RQR+ D   S    GG       D S+LGFSLGS+QSAPA       L+ N+A GG   GG      XXXXXXXX       S TAF++++P  GG+RV    +SPP               G LSPL+ SVG  G        AGPE     + S DPHL L+++P+W    +G  ++AG LPK+KQ SRERPLTHERP TRNPRDP NVPAR  AH SPK    S S +       Q T DD    GGST  SF SLPMSL GWG    G ++G+ GG+     R +   G ITM KP+E+I QG LR
Sbjct:    1 MAGTLFPSPEPETPPIDRWARGWVASRRTTVRDWDRFPRGSSSDDGSEGGRSLRSVR-------STATGMTSAHRHGXXXXXHARHRPHSSSCKEDSSGVPFPLAPEVREDQSLPP---TIPGHSVRMSRKG-GDSRAKRGRGGHCAKRTGANRGEGGRRQGSGGESESGCLWDGGTDGSDRQEDDLDSRLK-DLGGREWTIDGAGELLIVDRVQGDAMPKTVVSALYNFRDVRDKLAGGENGGGGVXXXXXXXLDGGKRHRDGSGVGKTRGSISGSASFSKERKRSSLSLRRASRXXXXXXXXXXRRRGSGAFFELEPTLQPNLANSLDRPGPGVSVSDGGSLKEGPSWPQDPEHMSRSEYRERQRRQDLTGSSMLDGGE------DASSLGFSLGSVQSAPALRGLGLGLNGNAAAGGGRDGGXXXXXXXXXXXXXXGVGRGT-SITAFEDVNPFAGGIRV---DTSPPAGGDGRGAAGASGTRGDLSPLTASVG--GQSGSFFPGAGPESSSVGETSDDPHLALVKDPDWGRNVRGSPKEAGYLPKVKQVSRERPLTHERPYTRNPRDPRNVPARPNAHVSPKN---STSSRVGCNADPQYTGDD----GGSTKSSFPSLPMSLTGWGEGGGGGSLGKGGGVPGRPMRGKKGRGMITMTKPKEIIVQGLLR 643          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5392.12817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKF9_ECTSI5.160e-11443.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5392contigH-paniculata_contig5392:4120..8948 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5392.12817.1mRNA_H-paniculata_contig5392.12817.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5392 4120..8948 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5392.12817.1 ID=prot_H-paniculata_contig5392.12817.1|Name=mRNA_H-paniculata_contig5392.12817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=631bp
VAGTTRPSPEPQPATIDRWARGWIMSRSTKARGQDSLDRMSDDGSDGSRS
VRSTPSIRSMRSACALGTRSAQRESRHNQKVQQEAVPKPFPLGPELEEGQ
RDPPEGGNMPLDNQGRDRNGRGDSLSWSGEGGKSGEGVKKGDIGNAIKVG
YRNRDTAGWFLRPDLGGREWTIDAAGELLVLDRPQGDTLPGTLVSASYAF
RDVVDDCATTEVGGAGGDAATDEWEARRTGMGGRGANKRSSISSCWARDT
SRASVSRRASGRRISRRYSRRGANNRFFALEPTLQPNLTTSLGRPGPGVS
VCDGNSIKEGPEWPQDPNHMSWGEYRQRQRKTDSMSSLNAFGGNNNTDET
DVSTLGFSLGSIQSAPAQIAQRETLSQNSAGGGSGCGGHNRGQNSRAGTA
GIGSGSRGHSFTAFDNIDPLDGGVRVARATSSPPRNMQSARFGKGYRAPG
PLSPLSMSVGDDGAGAGGGGAAGPEWIGDDDDSRDPHLQLLQEPEWKTGT
QGQARKAGLLPKIKQHSRERPLTHERPNTRNPRDPPNVPARSQAHSSPKK
IGGSGSQQPASWEGRQVTADDSDSIGGSTSFSSLPMSLMGWGADGAAIGR
SGGMKSEHRRAEGTITMNKPRELIAQGFLR*
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