prot_H-paniculata_contig538.12808.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig538.12808.1
Unique Nameprot_H-paniculata_contig538.12808.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length743
Homology
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BLAST of mRNA_H-paniculata_contig538.12808.1 vs. uniprot
Match: D7G0F8_ECTSI (SMAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0F8_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.770e-19
Identity = 101/204 (49.51%), Postives = 107/204 (52.45%), Query Frame = 0 
Query:  555 AASVTAAPASADPPRRPRWDKAGPVATAKGVTGSSANPGPPQG------KKLVWGGXXXXXXXXXXXXRTLWATSXXXXXXXXXXXXXXXXXXXGGVKA---PATEVEQRWQEAAAALGPAERQVKFLRLLGAKGAAAGAAXXASGTVSAGRAPENACQEG-------GNPNSASSAHKVMQDLEIQYQKAHRAHFGFQRGLGK 742
            AA+ T    S D PRRPRWDKA P ATA    G SA      G      KKLVW   XXXXXXXXXX R LW  +                   G  +     A  VEQRWQEAAAALGPAERQVKFLRLLGAK  AA   XX                          +   A++A KVMQDLEI YQKAHRAHFGFQRGLGK
Sbjct:  370 AATATVPGTSGDVPRRPRWDKAAPTATA----GLSAAVAKASGRAVAGKKKLVW---XXXXXXXXXXKRPLWGVTTEAGVAAPMGGGNGSGLSPGQAQEGDQQANGVEQRWQEAAAALGPAERQVKFLRLLGAKKGAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDGRAANA-KVMQDLEIHYQKAHRAHFGFQRGLGK 565
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig538.12808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0F8_ECTSI1.770e-1949.51SMAP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028124Small acidic protein-like domainPFAMPF15477SMAPcoord: 656..741
e-value: 5.4E-11
score: 43.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig538contigH-paniculata_contig538:1235..6265 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig538.12808.1mRNA_H-paniculata_contig538.12808.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig538 646..7051 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig538.12808.1 ID=prot_H-paniculata_contig538.12808.1|Name=mRNA_H-paniculata_contig538.12808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=743bp
MLQMARPRLQRPSPPRGNVGQYEPTTNETTIASGSHTYVGGGGGDGRSFR
RERGTGDRGGGAGMRRECADSGGGSGDGYGDRRRADSRDGEHRDRDRSAG
GSAGRGVVRLDSGGSGRDGRESRHEGRRRDDFGRDGRTDDYRNRDMRGEH
GHASAKDTRHTDSRDEQRRQGEGVCVRSGSGGGDSDGCDGDGVTGRIPID
PSSGARNNGHDSSDNQRYEQDDLVRITRNETVGGGDGASRGDRGALEDLR
PSSRHDGRDDSRDRQGARHQSRSSLGHNRNRGRENGDGNSSDARRGLAGS
GSRSWNWPRDRSGDRTGDRTRERTARDRTEEQDRPGFRVGPGDPPRSGDA
RRDYSLNRVGGGHREPGCLRDRRSDDRRNRDSRSRQNMYRYSDRGGGRGR
DHRPRSSYNGEREARNWGDGGWGGGGIGRSDVSRDSSCGWRDSRERRCVS
SRSDDQQGGASAAPKSRDDSSSPVSSAAAGFRDGEWVGSGALKGSGAEGR
RSDEDKTYFGRDRGRTDSAQRSSTIATSTVNTAASTRLPLSSTRVTGFVS
SGSAAASVTAAPASADPPRRPRWDKAGPVATAKGVTGSSANPGPPQGKKL
VWGGSGGGGGGGIGNKRTLWATSKGDEAAAGGGSQGQGGAAAGGVKAPAT
EVEQRWQEAAAALGPAERQVKFLRLLGAKGAAAGAAAAASGTVSAGRAPE
NACQEGGNPNSASSAHKVMQDLEIQYQKAHRAHFGFQRGLGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028124SMAP_dom