prot_H-paniculata_contig5373.12797.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5373.12797.1
Unique Nameprot_H-paniculata_contig5373.12797.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length179
Homology
BLAST of mRNA_H-paniculata_contig5373.12797.1 vs. uniprot
Match: D7FX43_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX43_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 8.330e-89
Identity = 146/220 (66.36%), Postives = 155/220 (70.45%), Query Frame = 0
Query:    1 MLDEKQGDTICLGADRGGCGTVVQDHK--------VHEGSMYRKFEGEADRSHHGPAPNPLYSTAHNMRTWIGEGK-------------------------------------------DASRLRNLAEDVEMGLSNVGKVDRKTRTAYKDQMKREAFDLINHISGNSDLHETVVVRAKELFAGWRNAKEHVNQKDAVICACLVAAYREVNTEELSRLFD 169
            M D KQGDTICLG D  GCGTVVQDHK        VHEGSMYRKFEGEADRSHHGPAPN LYSTAHNMRTWI EGK                                           DA+RLRNLAEDVEMGLS VGK +RKTRTAYKD+MKREAFDLINHI+GN DLHETV VRAKELFAGWRN KEHV+QK AVICAC++AAYREV TEEL+R+FD
Sbjct:  105 MQDAKQGDTICLGTDGQGCGTVVQDHKARRRGGGGVHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARLSRSRYFLMRCAFFRQAGWLPLCRPAVLGGGGVAPFSWRGHDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTEELTRMFD 324          
BLAST of mRNA_H-paniculata_contig5373.12797.1 vs. uniprot
Match: A0A835ZF02_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF02_9STRA)

HSP 1 Score: 228 bits (581), Expect = 5.040e-69
Identity = 106/164 (64.63%), Postives = 131/164 (79.88%), Query Frame = 0
Query:    1 MLDEKQGDTICLGADRGGCGTVVQDHKVHEGSMYRKFEGEADRSHHGPAPNPLYSTAHNMRTWIGEGK-DASRLRNLAEDVEMGLSNVGKVDRKTRTAYKDQMKREAFDLINHISGNSDLHETVVVRAKELFAGWRNAKEHVNQKDAVICACLVAAYREVNTEE 163
            +LD KQGDTIC+G    GCG VV+DHK HEG+MYR+FEGE DRSHHG  P+ LYSTA+NMRT I +G  D++RL NL+  VEM LS +GK D++TR  YKDQMK++AFD+I+H++ N DLH TV  RAKELFAGWRN KEHV+ K+AVICAC+VAAYR +  +E
Sbjct:   63 VLDAKQGDTICMGVGGAGCGAVVEDHKAHEGNMYRQFEGEVDRSHHGLPPDKLYSTAYNMRTQISKGALDSARLANLSSYVEMNLSQMGKDDKRTRVGYKDQMKKQAFDVIDHMAANCDLHGTVTERAKELFAGWRNVKEHVHHKNAVICACIVAAYRTIAADE 226          
BLAST of mRNA_H-paniculata_contig5373.12797.1 vs. uniprot
Match: A0A7S4DHI7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHI7_HETAK)

HSP 1 Score: 196 bits (497), Expect = 2.150e-60
Identity = 99/161 (61.49%), Postives = 117/161 (72.67%), Query Frame = 0
Query:    3 DEKQGDTICLGADRGGCGTVVQDHKVHEGSMYRKFEGEADRSHHGPAPNPLYSTAHNMRTWIGEG---KDASRLRNLAEDVEMGLSNVGKVD-RKTRTAYKDQMKREAFDLINHISGNSDLHETVVVRAKELFAGWRNAKEHVNQKDAVICACLVAAYREV 159
            D+K GDTIC+G D  GCG VVQD KVHEGSMYR+FEGE DRSHHGPAPN LYS  HNM+T+I  G   KDA  LR ++E VE+ LSN+G    R TR  YKDQ KR+AF+L+ H++ N DLHE VV RAKE FA +RNA+E V   + V+ ACLV  YR V
Sbjct:   54 DKKSGDTICMGKDNLGCGNVVQDRKVHEGSMYRRFEGEEDRSHHGPAPNLLYSNQHNMQTFIVGGTGTKDAGALRRISESVELNLSNMGAEGARATRVGYKDQQKRKAFELLAHVAANLDLHEGVVERAKETFAYYRNAQEKVYHFEEVLAACLVHGYRTV 214          
BLAST of mRNA_H-paniculata_contig5373.12797.1 vs. uniprot
Match: W2RG83_PHYPN (C2H2-type domain-containing protein n=38 Tax=Peronosporaceae TaxID=4777 RepID=W2RG83_PHYPN)

HSP 1 Score: 197 bits (502), Expect = 1.090e-57
Identity = 97/166 (58.43%), Postives = 121/166 (72.89%), Query Frame = 0
Query:    1 MLDEKQGDTICLGADRGGCGTVVQDHKVHEGSMYRKFEGEADRSHHGPAPNPLYSTAHNMRTWIGE-GKDASRLRNLAEDVEMGLSNVGKVDRKTRTAYKDQMKREAFDLINHISGNSDLHETVVVRAKELFAGWRNAKEHVNQKDAVICACLVAAYREVNTEELS 165
            + D  +GDTIC G D  GCGTVVQDH VHEGS YRKFEGE D+SHHGPAPN L+ST HN+RT I + G+ A  LR  AE VEM LS +GK +R+TR  YKDQMK++A  LI+H   N DLHE V  RAK++FA +R+ +EHV+Q DA++  C++AAY E + E  S
Sbjct:  183 ITDYARGDTICNGVDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKEMYS 348          
BLAST of mRNA_H-paniculata_contig5373.12797.1 vs. uniprot
Match: A0A0W8C063_PHYNI (C2H2-type domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C063_PHYNI)

HSP 1 Score: 197 bits (502), Expect = 9.520e-57
Identity = 97/166 (58.43%), Postives = 121/166 (72.89%), Query Frame = 0
Query:    1 MLDEKQGDTICLGADRGGCGTVVQDHKVHEGSMYRKFEGEADRSHHGPAPNPLYSTAHNMRTWIGE-GKDASRLRNLAEDVEMGLSNVGKVDRKTRTAYKDQMKREAFDLINHISGNSDLHETVVVRAKELFAGWRNAKEHVNQKDAVICACLVAAYREVNTEELS 165
            + D  +GDTIC G D  GCGTVVQDH VHEGS YRKFEGE D+SHHGPAPN L+ST HN+RT I + G+ A  LR  AE VEM LS +GK +R+TR  YKDQMK++A  LI+H   N DLHE V  RAK++FA +R+ +EHV+Q DA++  C++AAY E + E  S
Sbjct:  307 ITDYARGDTICNGVDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKEMYS 472          
BLAST of mRNA_H-paniculata_contig5373.12797.1 vs. uniprot
Match: A0A1V9ZD07_9STRA (C2H2-type domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD07_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.970e-56
Identity = 91/157 (57.96%), Postives = 117/157 (74.52%), Query Frame = 0
Query:    1 MLDEKQGDTICLGADRGGCGTVVQDHKVHEGSMYRKFEGEADRSHHGPAPNPLYSTAHNMRTWIGE-GKDASRLRNLAEDVEMGLSNVGKVDRKTRTAYKDQMKREAFDLINHISGNSDLHETVVVRAKELFAGWRNAKEHVNQKDAVICACLVAAY 156
            + D  +GDTIC GAD  GCG VVQDH VHEG+ YRKFEGE D+SHHGPAPN L+ST HN+RT I + G+ ++ LR  AE VEM LS +GK +R+TR  YKDQMK++A  LI+H   N DLHE V  RAK++FA +R+ +EHV+Q +AV+  C++ AY
Sbjct:  112 ITDYARGDTICTGADGHGCGNVVQDHIVHEGNAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKAIRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAY 268          
BLAST of mRNA_H-paniculata_contig5373.12797.1 vs. uniprot
Match: A0A8K1FG42_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG42_PYTOL)

HSP 1 Score: 193 bits (490), Expect = 3.290e-56
Identity = 95/163 (58.28%), Postives = 120/163 (73.62%), Query Frame = 0
Query:    1 MLDEKQGDTICLGADRGGCGTVVQDHKVHEGSMYRKFEGEADRSHHGPAPNPLYSTAHNMRTWIGE-GKDASRLRNLAEDVEMGLSNVGKVDRKTRTAYKDQMKREAFDLINHISGNSDLHETVVVRAKELFAGWRNAKEHVNQKDAVICACLVAAYREVNTE 162
            + D  +GDTIC G D  GCGTVVQDH VHEGS YRKFEGE D+SHHGPAPN L+S++HN+RT I + G+ A  LR  AE VEM LS +GK +R+TR  YKDQMK++A  LI+H   N DLHE V  RAK++FA +R+ +EHV+Q +AV+  C++AAY E   E
Sbjct:  145 ITDYARGDTICNGLDGRGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSSSHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKASRLIDHTISNLDLHEIVGNRAKKMFADFRDLREHVHQFEAVVAGCVIAAYMETAKE 307          
BLAST of mRNA_H-paniculata_contig5373.12797.1 vs. uniprot
Match: A0A024GKS6_9STRA (C2H2-type domain-containing protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GKS6_9STRA)

HSP 1 Score: 192 bits (489), Expect = 3.600e-56
Identity = 93/157 (59.24%), Postives = 118/157 (75.16%), Query Frame = 0
Query:    1 MLDEKQGDTICLGADRGGCGTVVQDHKVHEGSMYRKFEGEADRSHHGPAPNPLYSTAHNMRTWIGE-GKDASRLRNLAEDVEMGLSNVGKVDRKTRTAYKDQMKREAFDLINHISGNSDLHETVVVRAKELFAGWRNAKEHVNQKDAVICACLVAAY 156
            + D  +GDTIC G D  GCGTVVQDH VHEGS YRKFEGE D+SHHGPAPN L+ST+HN+RT I + G+ A  LR  AE VEM LS +GK +R+TR  YKDQMK++A  LI+H   N DLHE V  RAK++FA +R+ +EHV+Q +A++  C++AAY
Sbjct:  137 ITDYARGDTICNGPDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTSHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTVSNLDLHEIVGNRAKKMFAEFRDVREHVHQFEAMVAGCVIAAY 293          
BLAST of mRNA_H-paniculata_contig5373.12797.1 vs. uniprot
Match: A0A7S4A3Y9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3Y9_9STRA)

HSP 1 Score: 188 bits (478), Expect = 3.730e-56
Identity = 89/163 (54.60%), Postives = 119/163 (73.01%), Query Frame = 0
Query:    1 MLDEKQGDTICLGADRGGCGTVVQDHKVHEGSMYRKFEGEADRSHHGPAPNPLYSTAHNMRTWI-----GEGKDASRLRNLAEDVEMGLSNVGKVDRKTRTAYKDQMKREAFDLINHISGNSDLHETVVVRAKELFAGWRNAKEHVNQKDAVICACLVAAYRE 158
            + + K GD +CLG    GCG VV++HK+ EG+ +RKFEGE D+SHHGPAPN LYS AHNM+T +       G+ ASRLR  +E +EMGLSN+G  +RKTRT YKDQMK++AFDLI H + N +LH++VV RA+ELFA +R+ +E V + D V+ AC++ A  E
Sbjct:   89 LHESKDGDVVCLGIGDQGCGNVVEEHKLFEGNQFRKFEGEEDKSHHGPAPNKLYSAAHNMKTSLVPTGGAGGQRASRLRQASETMEMGLSNLGTDERKTRTGYKDQMKKKAFDLIAHAASNLNLHDSVVGRAQELFANYRDEREFVQKFDGVVAACVIQAAEE 251          
BLAST of mRNA_H-paniculata_contig5373.12797.1 vs. uniprot
Match: K3X3Y0_GLOUD (C2H2-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3Y0_GLOUD)

HSP 1 Score: 192 bits (489), Expect = 6.050e-56
Identity = 93/163 (57.06%), Postives = 119/163 (73.01%), Query Frame = 0
Query:    1 MLDEKQGDTICLGADRGGCGTVVQDHKVHEGSMYRKFEGEADRSHHGPAPNPLYSTAHNMRTWIGE-GKDASRLRNLAEDVEMGLSNVGKVDRKTRTAYKDQMKREAFDLINHISGNSDLHETVVVRAKELFAGWRNAKEHVNQKDAVICACLVAAYREVNTE 162
            + D  +GDTIC G D  GCGTVVQDH VHEGS YRKFEGE D+SHHGPAPN L+S+ HN+RT I + G+ A  LR  AE VEM LS +GK +R+TR  YKDQMK++A  LI+H   N DLHE V  RAK++FA +R+ +EHV+Q DA++  C++A+Y +   E
Sbjct:  154 ITDYARGDTICNGLDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSSGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIASYMDTGKE 316          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5373.12797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX43_ECTSI8.330e-8966.36C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A835ZF02_9STRA5.040e-6964.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DHI7_HETAK2.150e-6061.49Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W2RG83_PHYPN1.090e-5758.43C2H2-type domain-containing protein n=38 Tax=Peron... [more]
A0A0W8C063_PHYNI9.520e-5758.43C2H2-type domain-containing protein n=10 Tax=Phyto... [more]
A0A1V9ZD07_9STRA1.970e-5657.96C2H2-type domain-containing protein n=1 Tax=Thraus... [more]
A0A8K1FG42_PYTOL3.290e-5658.28Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024GKS6_9STRA3.600e-5659.24C2H2-type domain-containing protein n=3 Tax=Albugo... [more]
A0A7S4A3Y9_9STRA3.730e-5654.60Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
K3X3Y0_GLOUD6.050e-5657.06C2H2-type domain-containing protein n=1 Tax=Globis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.170coord: 1..175
e-value: 1.4E-16
score: 62.9
NoneNo IPR availablePANTHERPTHR11618:SF13TRANSCRIPTION INITIATION FACTOR IIBcoord: 3..160
IPR000812Transcription factor TFIIBPANTHERPTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDcoord: 3..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5373contigH-paniculata_contig5373:1132..13613 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5373.12797.1mRNA_H-paniculata_contig5373.12797.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5373 1132..13625 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5373.12797.1 ID=prot_H-paniculata_contig5373.12797.1|Name=mRNA_H-paniculata_contig5373.12797.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=179bp
MLDEKQGDTICLGADRGGCGTVVQDHKVHEGSMYRKFEGEADRSHHGPAP
NPLYSTAHNMRTWIGEGKDASRLRNLAEDVEMGLSNVGKVDRKTRTAYKD
QMKREAFDLINHISGNSDLHETVVVRAKELFAGWRNAKEHVNQKDAVICA
CLVAAYREVNTEELSRLFDRKDRDKNGEG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000812TFIIB