prot_H-paniculata_contig537.12793.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig537.12793.1
Unique Nameprot_H-paniculata_contig537.12793.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length378
Homology
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BLAST of mRNA_H-paniculata_contig537.12793.1 vs. uniprot
Match: A0A6H5JIG0_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG0_9PHAE)

HSP 1 Score: 244 bits (623), Expect = 5.320e-75
Identity = 165/341 (48.39%), Postives = 187/341 (54.84%), Query Frame = 0 
Query:  104 IHSAGVTKPEGLKLRVVKASGRTLDDTLFHMEIRTRRPGQMWSVCRKYHEFQDLHMALQKGVHPETTLPRLPRTPFMG---TLELATLERTRAGLQAYVGAVAVDVPSALGNEEFVLFLDREEKGRRLFAGKR-----------------------------------------------KETRRISSRFPQNDFVGKPSTPA------SRLSVTSSPFPSTPESTPESDRQQTEEQKLELAAKEGAAQNHFDGVGAVMNMLVSFSDXXXXXX--ELGLDDDFIDGEDAIRAMLDRDAEEAEDDNLFTIPAGTDFG-ELDDD--------TGDDFDLMYHG 377
            +H+ GV +PEG+KLRVVKASGRTL+DT FHMEIRT RPGQ+WSVCR+Y +FQ LH  LQ    P   LPRLPR P  G    LE ATLER RAGLQAY  AV   VP+A G EE V+FLD EEKGRRLF+                                                  K   R  + FP +    K  TP       S L +                  + EE+KL LAA EGAA NHFDGVGAVMN  VSFS+        E G + DFIDGEDAIRAMLDRDA+EAEDDNLF+IPAGTDFG  LDD         + D FD+ YHG
Sbjct:    1 MHTPGVLRPEGVKLRVVKASGRTLEDTKFHMEIRTLRPGQVWSVCRRYKDFQSLHSCLQ-ATFPALVLPRLPRPPTGGGGMALEPATLERARAGLQAYAAAVVGSVPAAWGLEELVMFLDSEEKGRRLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKPVARKGAAFPPDLVSPKTGTPGVGFGQKSLLDL------------------KVEEKKLALAALEGAAANHFDGVGAVMNAAVSFSEDSDDGASQEFGEESDFIDGEDAIRAMLDRDADEAEDDNLFSIPAGTDFGIPLDDXXXXXXQDCSADAFDITYHG 322
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BLAST of mRNA_H-paniculata_contig537.12793.1 vs. uniprot
Match: D7FV50_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV50_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 1.270e-74
Identity = 171/351 (48.72%), Postives = 195/351 (55.56%), Query Frame = 0 
Query:   95 RTDERETLTIHSAGVTKPEGLKLRVVKASGRTLDDTLFHMEIRTRRPGQMWSVCRKYHEFQDLHMALQKGVHPETTLPRLPRTPFMG---TLELATLERTRAGLQAYVGAVAVDVPSALGNEEFVLFLDREEKGRRLFAGKR----------------------------------------------KETRRISSRFPQNDFVGKPSTPA------SRLSVTSSPFPSTPESTPESDRQQTEEQKLELAAKEGAAQNHFDGVGAVMNMLVSFSDXXXXXX--ELGLDDDFIDGEDAIRAMLDRDAEEAEDDNLFTIPAGTDFG-ELDDD----------TGDDFDLMYHG 377
            R DERE +T+H+ GV +PEG+KLRVVKASGRTL+DT FHMEIRT RPGQ+WSVCR+Y +FQ LH  LQ    P   LPRLPR P  G    LE ATLER RAGLQAY  AV   VP+A G EE V+FLD EEKGRRLF+                                                 K   R ++ FP +    K  TP       S L +                  + EE+KL LAA EGAA NHFDGVGAVMN  VSFS+        E G + DFIDGEDAIRAMLDRDA+EAEDDNLF+IPAGTDFG  LDD           + D FD+ YHG
Sbjct:  460 RRDEREVVTMHTPGVLRPEGVKLRVVKASGRTLEDTKFHMEIRTLRPGQVWSVCRRYKDFQSLHSCLQ-ATFPALVLPRLPRPPTGGGGMALEPATLERARAGLQAYAAAVVGSVPAAWGLEELVMFLDSEEKGRRLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKPVARKAAAFPPDLVSPKAGTPGVGFGQKSLLDL------------------KVEEKKLALAALEGAAANHFDGVGAVMNAAVSFSEDSDDDASQEFGEESDFIDGEDAIRAMLDRDADEAEDDNLFSIPAGTDFGIPLDDXXXXXXXXQDCSADAFDITYHG 791
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig537.12793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JIG0_9PHAE5.320e-7548.39PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FV50_ECTSI1.270e-7448.72PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 112..236
e-value: 3.8E-13
score: 51.2
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 130..222
IPR001683Phox homologous domainPFAMPF00787PXcoord: 126..220
e-value: 1.8E-11
score: 44.0
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 110..226
score: 10.695

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig537contigH-paniculata_contig537:27408..32493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig537.12793.1mRNA_H-paniculata_contig537.12793.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig537 27390..32563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig537.12793.1 ID=prot_H-paniculata_contig537.12793.1|Name=mRNA_H-paniculata_contig537.12793.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=378bp
MGGAKMTQARDAGTAVATGPSRSMRMKEFSRSATTGDTIDRVSSKNASNK
VAGGSKSAGARRTRKLSPEGRSSKPSRIVRSYTTQEYEPCRPRPRTDERE
TLTIHSAGVTKPEGLKLRVVKASGRTLDDTLFHMEIRTRRPGQMWSVCRK
YHEFQDLHMALQKGVHPETTLPRLPRTPFMGTLELATLERTRAGLQAYVG
AVAVDVPSALGNEEFVLFLDREEKGRRLFAGKRKETRRISSRFPQNDFVG
KPSTPASRLSVTSSPFPSTPESTPESDRQQTEEQKLELAAKEGAAQNHFD
GVGAVMNMLVSFSDDDDDDDELGLDDDFIDGEDAIRAMLDRDAEEAEDDN
LFTIPAGTDFGELDDDTGDDFDLMYHG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf
IPR001683Phox