prot_H-paniculata_contig53601.12782.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig53601.12782.1
Unique Nameprot_H-paniculata_contig53601.12782.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length55
Homology
BLAST of mRNA_H-paniculata_contig53601.12782.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI)

HSP 1 Score: 53.9 bits (128), Expect = 5.550e-7
Identity = 22/54 (40.74%), Postives = 36/54 (66.67%), Query Frame = 0
Query:    2 MLSLAAIQDWELRHVDFEQAYLQAPIDHEIFVEIPVKYQEFPGAVGCLDKAIYG 55
            ++S+AA++DW++ H+D + AYL   ++ EI+V  P  + E  G V  L KA+YG
Sbjct:  319 LMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYG 372          
BLAST of mRNA_H-paniculata_contig53601.12782.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI)

HSP 1 Score: 53.9 bits (128), Expect = 5.580e-7
Identity = 22/54 (40.74%), Postives = 36/54 (66.67%), Query Frame = 0
Query:    2 MLSLAAIQDWELRHVDFEQAYLQAPIDHEIFVEIPVKYQEFPGAVGCLDKAIYG 55
            ++S+AA++DW++ H+D + AYL   ++ EI+V  P  + E  G V  L KA+YG
Sbjct:  924 LMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYG 977          
BLAST of mRNA_H-paniculata_contig53601.12782.1 vs. uniprot
Match: A0A0V0GGR6_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0GGR6_SOLCH)

HSP 1 Score: 51.2 bits (121), Expect = 7.970e-7
Identity = 22/55 (40.00%), Postives = 36/55 (65.45%), Query Frame = 0
Query:    1 MMLSLAAIQDWELRHVDFEQAYLQAPIDHEIFVEIPVKYQEFPGAVGCLDKAIYG 55
            ++LSLAA+ +W L+  D + A+L   +D EI++E+P  ++   G V  L KA+YG
Sbjct:   52 ILLSLAAVFNWNLQQFDVKNAFLHGDLDEEIYMEVPPAFESKKGMVCRLKKALYG 106          
BLAST of mRNA_H-paniculata_contig53601.12782.1 vs. uniprot
Match: A0A8H6YZQ1_9AGAR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6YZQ1_9AGAR)

HSP 1 Score: 52.8 bits (125), Expect = 1.430e-6
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    1 MMLSLAAIQDWELRHVDFEQAYLQAPIDHEIFVEIPVKYQEF-----PGA------VGCLDKAIYG 55
            ++L+ AA+ +WE+   D + AYL APID  +++EIP  YQ+F     P A      V  L+K IYG
Sbjct: 1043 VLLTFAAVNNWEIHQADVKNAYLNAPIDETVYMEIPEHYQQFSSKPLPTAAAGRRLVAKLNKGIYG 1108          
BLAST of mRNA_H-paniculata_contig53601.12782.1 vs. uniprot
Match: A0A7S0MH90_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MH90_9CRYP)

HSP 1 Score: 49.7 bits (117), Expect = 1.730e-5
Identity = 21/55 (38.18%), Postives = 35/55 (63.64%), Query Frame = 0
Query:    1 MMLSLAAIQDWELRHVDFEQAYLQAPIDHEIFVEIPVKYQEFPGAVGCLDKAIYG 55
            +++++A  +DW +R  D   AYL API+ EI+VE P  ++E    +  L K++YG
Sbjct:  154 IIIAIATQRDWGIRQFDVSTAYLNAPIEEEIYVEPPPGFEESDKKIWLLKKSLYG 208          
BLAST of mRNA_H-paniculata_contig53601.12782.1 vs. uniprot
Match: A0A0C4ERQ9_PUCT1 (Uncharacterized protein n=1 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A0C4ERQ9_PUCT1)

HSP 1 Score: 49.7 bits (117), Expect = 1.750e-5
Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 0
Query:    1 MMLSLAAIQDWELRHVDFEQAYLQAPIDHEIFVEIPVKYQEFPGAVGCLDKAIYG 55
            ++L+LAA  +W++   DF  AYL APID E++VE P      PG    L K +YG
Sbjct:  878 LILTLAAKFNWKVYSFDFVAAYLNAPIDEEVYVEAPEGMDVKPGEALLLHKTLYG 932          
BLAST of mRNA_H-paniculata_contig53601.12782.1 vs. uniprot
Match: A0A0C4F901_PUCT1 (Uncharacterized protein n=1 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A0C4F901_PUCT1)

HSP 1 Score: 49.7 bits (117), Expect = 1.760e-5
Identity = 23/55 (41.82%), Postives = 35/55 (63.64%), Query Frame = 0
Query:    1 MMLSLAAIQDWELRHVDFEQAYLQAPIDHEIFVEIPVKYQEFPGAVGCLDKAIYG 55
            ++L++AA  +WE++  DF  AYL +PID E++V+ P      PG    L KA+YG
Sbjct: 1231 LLLTVAAAYNWEVQSFDFVAAYLNSPIDEEVWVKPPEGMTTPPGHALLLKKALYG 1285          
BLAST of mRNA_H-paniculata_contig53601.12782.1 vs. uniprot
Match: A0A2N5T525_9BASI (Uncharacterized protein n=1 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5T525_9BASI)

HSP 1 Score: 49.3 bits (116), Expect = 2.410e-5
Identity = 23/55 (41.82%), Postives = 34/55 (61.82%), Query Frame = 0
Query:    1 MMLSLAAIQDWELRHVDFEQAYLQAPIDHEIFVEIPVKYQEFPGAVGCLDKAIYG 55
            ++L++AA  DW +   DF  AYL +PID EI+++ P      PG    L+KA+YG
Sbjct: 1177 LLLTVAAANDWPVHSFDFVAAYLNSPIDEEIWIKPPEGMTVPPGHALRLEKALYG 1231          
BLAST of mRNA_H-paniculata_contig53601.12782.1 vs. uniprot
Match: A0A2S4VZZ4_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Puccinia striiformis TaxID=27350 RepID=A0A2S4VZZ4_9BASI)

HSP 1 Score: 48.9 bits (115), Expect = 3.280e-5
Identity = 22/55 (40.00%), Postives = 34/55 (61.82%), Query Frame = 0
Query:    1 MMLSLAAIQDWELRHVDFEQAYLQAPIDHEIFVEIPVKYQEFPGAVGCLDKAIYG 55
            ++L++AA + W +   DF  AYL +PI+ E++VE P   +  PG    L KA+YG
Sbjct:  742 LILAIAAQKSWPVHSFDFVAAYLNSPIEEELWVEAPEGLKVLPGQACRLKKALYG 796          
BLAST of mRNA_H-paniculata_contig53601.12782.1 vs. uniprot
Match: A0A2N5TGH8_9BASI (Uncharacterized protein n=1 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5TGH8_9BASI)

HSP 1 Score: 48.5 bits (114), Expect = 4.490e-5
Identity = 23/55 (41.82%), Postives = 34/55 (61.82%), Query Frame = 0
Query:    1 MMLSLAAIQDWELRHVDFEQAYLQAPIDHEIFVEIPVKYQEFPGAVGCLDKAIYG 55
            ++L++AA  DW +   DF  AYL +PID E++V+ P   Q   G    L+KA+YG
Sbjct:  851 LLLTVAAANDWPVHSFDFVAAYLNSPIDEEVWVKPPEGMQVPAGHALRLEKALYG 905          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53601.12782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5GI29_9HEMI5.550e-740.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5GGZ1_9HEMI5.580e-740.74Integrase catalytic domain-containing protein (Fra... [more]
A0A0V0GGR6_SOLCH7.970e-740.00Putative ovule protein (Fragment) n=1 Tax=Solanum ... [more]
A0A8H6YZQ1_9AGAR1.430e-640.91Retrovirus-related Pol polyprotein from transposon... [more]
A0A7S0MH90_9CRYP1.730e-538.18Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A0C4ERQ9_PUCT11.750e-543.64Uncharacterized protein n=1 Tax=Puccinia triticina... [more]
A0A0C4F901_PUCT11.760e-541.82Uncharacterized protein n=1 Tax=Puccinia triticina... [more]
A0A2N5T525_9BASI2.410e-541.82Uncharacterized protein n=1 Tax=Puccinia coronata ... [more]
A0A2S4VZZ4_9BASI3.280e-540.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N5TGH8_9BASI4.490e-541.82Uncharacterized protein n=1 Tax=Puccinia coronata ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..55
e-value: 1.7E-7
score: 31.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig53601contigH-paniculata_contig53601:3..167 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig53601.12782.1mRNA_H-paniculata_contig53601.12782.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig53601 3..455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig53601.12782.1 ID=prot_H-paniculata_contig53601.12782.1|Name=mRNA_H-paniculata_contig53601.12782.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp
MMLSLAAIQDWELRHVDFEQAYLQAPIDHEIFVEIPVKYQEFPGAVGCLD
KAIYG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2