prot_H-paniculata_contig5354.12775.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5354.12775.1
Unique Nameprot_H-paniculata_contig5354.12775.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length284
Homology
BLAST of mRNA_H-paniculata_contig5354.12775.1 vs. uniprot
Match: A0A8J2T2D7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2D7_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.040e-32
Identity = 72/187 (38.50%), Postives = 99/187 (52.94%), Query Frame = 0
Query:    5 EGRLTPFMVFYTEHRESVKANLDKVSGGAARPEDISKEVARMWRSLGMERTRDYCLLSNLYAESRAKHAAAGTATSGNGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDEGLPKLPVSSFMWFSRHHRAILRSENQELSFCEVGKTVGALWKAATPADKRPFEDLAAEDKERYTRELAEYK 191
            E RLTPFM+FY E R+ V+    K+      P ++S E+AR W++L  +++R Y +LS  YAE +                                                KD   PK   S++M+FS+HHR +L+ EN  L+F ++GKTVGA+WKAATP +K+PFEDLAA D+ RY REL EYK
Sbjct:    3 EERLTPFMLFYCEVRDKVEKESPKLQ-----PHEVSSEIARRWKALPADQSRAYSVLSATYAEQK-------------------------KFQKDSPKVPPSPKPVKKRKERYKDPRAPKSATSAYMYFSKHHRTLLKRENASLTFGDLGKTVGAMWKAATPGEKKPFEDLAARDRARYARELEEYK 159          
BLAST of mRNA_H-paniculata_contig5354.12775.1 vs. uniprot
Match: A0A7S3JW32_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW32_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.520e-30
Identity = 72/198 (36.36%), Postives = 108/198 (54.55%), Query Frame = 0
Query:    7 RLTPFMVFYTEHRESVKANLDKVSGGAARPEDISKEVARMWRSLGMERTRDYCLLSNLYAESRAKHAAAGTAT------------SGNGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDEGLPKLPVSSFMWFSRHHRAILRSENQELSFCEVGKTVGALWKAATPADKRPFEDLAAEDKERYTRELAEYKA 192
            RLTPFM+F+ EH++ V+      +  +A P ++S+ +A  W++L  E+ R Y +LS  Y E +  ++ A +              +GNG +                               +KD   PK   S++M+FS+HHR +L+ EN  L+F ++GKTVGA+WKAATP +KRPFE+LAAEDK RY  EL +YK+
Sbjct:    4 RLTPFMLFFCEHKDVVQQ-----ANPSAAPHEVSQIIADNWKALAPEKARAYSVLSATYTEQKKANSLATSKXXXXXXXXXXXXETGNGGAKVNGK--------------------------EKDPKAPKSATSAYMYFSKHHRMLLKQENSYLTFGDLGKTVGAMWKAATPEEKRPFEELAAEDKNRYVNELHDYKS 170          
BLAST of mRNA_H-paniculata_contig5354.12775.1 vs. uniprot
Match: A0A6H5JGF1_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF1_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 2.030e-23
Identity = 50/78 (64.10%), Postives = 62/78 (79.49%), Query Frame = 0
Query:  131 MWFSRHHRAILRSENQELSFCEVGKTVGALWKAATPADKRPFEDLAAEDKERYTRELAEYKAWVAHTHAQQGNTNEGG 208
            MWFSRHHRAILR++N+E+SF ++GK VG LWK+AT   KRPF+DL+AEDK RY RELAEYKAW+     +QG+T   G
Sbjct:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWLL---LKQGSTENKG 75          
BLAST of mRNA_H-paniculata_contig5354.12775.1 vs. uniprot
Match: F0YAN0_AURAN (HMG box domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAN0_AURAN)

HSP 1 Score: 91.7 bits (226), Expect = 4.950e-20
Identity = 39/64 (60.94%), Postives = 54/64 (84.38%), Query Frame = 0
Query:  127 VSSFMWFSRHHRAILRSENQELSFCEVGKTVGALWKAATPADKRPFEDLAAEDKERYTRELAEY 190
             S++M+FS+HHR +L+ EN +L+F ++GKTVGA+WKAATP +K+PFEDLAA D+ RY  EL+EY
Sbjct:   20 TSAYMYFSKHHRLLLKRENSDLTFGDLGKTVGAMWKAATPQEKKPFEDLAAADRTRYNSELSEY 83          
BLAST of mRNA_H-paniculata_contig5354.12775.1 vs. uniprot
Match: A0A1Y1XKB3_9FUNG (High mobility group box (Fragment) n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XKB3_9FUNG)

HSP 1 Score: 80.5 bits (197), Expect = 8.070e-16
Identity = 36/71 (50.70%), Postives = 53/71 (74.65%), Query Frame = 0
Query:  117 KKDEGLPKLPVSSFMWFSRHHRAILRSENQELSFCEVGKTVGALWKAATPADKRPFEDLAAEDKERYTREL 187
            +K+EG PK P++SFM+FS+  RA ++ +N + SF E+GK +G LWK A+P +K  +E  A+EDKERY RE+
Sbjct:    8 QKEEGAPKRPITSFMFFSQDKRAEVKRDNPDASFGELGKIIGNLWKNASPEEKEKYEKKASEDKERYRREM 78          
BLAST of mRNA_H-paniculata_contig5354.12775.1 vs. uniprot
Match: D7G1C1_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C1_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.950e-15
Identity = 33/48 (68.75%), Postives = 42/48 (87.50%), Query Frame = 0
Query:  131 MWFSRHHRAILRSENQELSFCEVGKTVGALWKAATPADKRPFEDLAAE 178
            MWFSRHHRAILR++N+E+SF ++GK VG LWK+AT   KRPF+DL+AE
Sbjct:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAE 48          
BLAST of mRNA_H-paniculata_contig5354.12775.1 vs. uniprot
Match: G0VJW2_NAUCC (HMG box domain-containing protein n=1 Tax=Naumovozyma castellii (strain ATCC 76901 / BCRC 22586 / CBS 4309 / NBRC 1992 / NRRL Y-12630) TaxID=1064592 RepID=G0VJW2_NAUCC)

HSP 1 Score: 79.3 bits (194), Expect = 3.030e-15
Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 0
Query:  117 KKDEGLPKLPVSSFMWFSRHHRAILRSENQELSFCEVGKTVGALWKAATPADKRPFEDLAAEDKERYTRELAEYKAWVA 195
            KKD   PK  +SS+M+F+   R I+RSEN +++F +VGK +G  WKA TP +K PFE  A +DKERY  E A Y A +A
Sbjct:   16 KKDPNAPKRALSSYMFFANATRDIVRSENPDVTFGQVGKLLGERWKALTPEEKEPFELKAKQDKERYASEKALYDATLA 94          
BLAST of mRNA_H-paniculata_contig5354.12775.1 vs. uniprot
Match: A0A5C5G4Q3_9BASI (High mobility group box domain-containing protein n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5G4Q3_9BASI)

HSP 1 Score: 79.0 bits (193), Expect = 6.630e-15
Identity = 35/74 (47.30%), Postives = 52/74 (70.27%), Query Frame = 0
Query:  117 KKDEGLPKLPVSSFMWFSRHHRAILRSENQELSFCEVGKTVGALWKAATPADKRPFEDLAAEDKERYTRELAEY 190
            KKD   PK P+S++M FS+  R++++ EN +++F E+GK +G  WK AT  DK+P+E+ A  DKERY +E A Y
Sbjct:   19 KKDPNAPKRPLSAYMHFSQDMRSVVKEENPDVTFGEIGKLLGVKWKEATENDKKPYEEKAKADKERYEKEKAAY 92          
BLAST of mRNA_H-paniculata_contig5354.12775.1 vs. uniprot
Match: A0A7S0V335_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0V335_9CHLO)

HSP 1 Score: 79.0 bits (193), Expect = 6.990e-15
Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 0
Query:  117 KKDEGLPKLPVSSFMWFSRHHRAILRSENQELSFCEVGKTVGALWKAATPADKRPFEDLAAEDKERYTRELAEYKA 192
            +KD   PK P  ++MWF +  R  ++SEN E+S  ++GK +G LWK ++  +K+ F  LA +DKERY +ELAEYK+
Sbjct:   38 EKDPNAPKKPCGAYMWFCKEKREGVKSENPEMSVTDIGKRLGQLWKESSEEEKQRFHALAKKDKERYDKELAEYKS 113          
BLAST of mRNA_H-paniculata_contig5354.12775.1 vs. uniprot
Match: A0A1Y1VI96_9FUNG (HMG box domain-containing protein (Fragment) n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VI96_9FUNG)

HSP 1 Score: 77.4 bits (189), Expect = 1.360e-14
Identity = 35/70 (50.00%), Postives = 51/70 (72.86%), Query Frame = 0
Query:  117 KKDEGLPKLPVSSFMWFSRHHRAILRSENQELSFCEVGKTVGALWKAATPADKRPFEDLAAEDKERYTRE 186
            +K++G PK P+ SFM+FS+  RA ++ +N + SF E+GK +G LWK A+P +K+ +E  A EDKERY RE
Sbjct:   19 RKEDGAPKRPMISFMFFSQDKRAEVKRDNPDASFGEIGKIIGNLWKNASPEEKKKYEKKALEDKERYKRE 88          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5354.12775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J2T2D7_9STRA2.040e-3238.50Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JW32_9STRA2.520e-3036.36Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6H5JGF1_9PHAE2.030e-2364.10HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
F0YAN0_AURAN4.950e-2060.94HMG box domain-containing protein (Fragment) n=1 T... [more]
A0A1Y1XKB3_9FUNG8.070e-1650.70High mobility group box (Fragment) n=1 Tax=Anaerom... [more]
D7G1C1_ECTSI1.950e-1568.75HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
G0VJW2_NAUCC3.030e-1550.63HMG box domain-containing protein n=1 Tax=Naumovoz... [more]
A0A5C5G4Q3_9BASI6.630e-1547.30High mobility group box domain-containing protein ... [more]
A0A7S0V335_9CHLO6.990e-1546.05Hypothetical protein n=1 Tax=Polytomella parva Tax... [more]
A0A1Y1VI96_9FUNG1.360e-1450.00HMG box domain-containing protein (Fragment) n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00886HIGHMOBLTY12coord: 156..175
score: 29.26
coord: 138..156
score: 28.07
coord: 175..195
score: 37.74
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 8..73
NoneNo IPR availablePANTHERPTHR13711:SF302HIGH MOBILITY GROUP PROTEIN DSP1-RELATEDcoord: 106..238
coord: 8..73
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 106..238
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 3..77
e-value: 1.5
score: 10.7
coord: 122..192
e-value: 1.1E-22
score: 91.4
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 123..191
e-value: 2.0E-18
score: 66.6
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 123..191
score: 17.542
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 108..194
e-value: 8.0E-24
score: 85.7
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 5..77
e-value: 5.3E-6
score: 28.9
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 7..56
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 110..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5354contigH-paniculata_contig5354:10563..12559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5354.12775.1mRNA_H-paniculata_contig5354.12775.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5354 10282..13465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5354.12775.1 ID=prot_H-paniculata_contig5354.12775.1|Name=mRNA_H-paniculata_contig5354.12775.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=284bp
MMEEEGRLTPFMVFYTEHRESVKANLDKVSGGAARPEDISKEVARMWRSL
GMERTRDYCLLSNLYAESRAKHAAAGTATSGNGASGGTGGGTSIGGGVGT
GGSGGGGGATKRRAKKKKDEGLPKLPVSSFMWFSRHHRAILRSENQELSF
CEVGKTVGALWKAATPADKRPFEDLAAEDKERYTRELAEYKAWVAHTHAQ
QGNTNEGGPPDGKKQKQESTPPPPQQHVSSTPTASPQAHRPAETLKQEKV
APSEAVAASNAASSGDASANGRTEGAPVPPCSI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf