prot_H-paniculata_contig53478.12763.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig53478.12763.1
Unique Nameprot_H-paniculata_contig53478.12763.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
BLAST of mRNA_H-paniculata_contig53478.12763.1 vs. uniprot
Match: D7G0Z3_ECTSI (Putative: beta-tubulin folding cofactor E n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z3_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 2.620e-23
Identity = 56/82 (68.29%), Postives = 63/82 (76.83%), Query Frame = 0
Query:    6 RYRELWKLHGDAMVHSASGGAGAGVAVSNLAANMAQVTLTSLVAASCTVEPAKKRLPAS-MTVGKLKQLCRRLFKVDTDQQV 86
            RYRELW LHGD+M     G AG G    ++AA M QVTL SL A SCTVEP KK+LPAS +TVGKLKQLC+RLFK+DTDQQV
Sbjct:  503 RYRELWALHGDSMAFGGRG-AGLGQQGGSMAAGMVQVTLISLAAVSCTVEPVKKKLPASSLTVGKLKQLCKRLFKLDTDQQV 583          
BLAST of mRNA_H-paniculata_contig53478.12763.1 vs. uniprot
Match: A0A6H5L3Q3_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q3_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 7.660e-14
Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 0
Query:   41 QVTLTSLVAASCTVEPAKKRLPAS-MTVGKLKQLCRRLFKVDTDQQV 86
            QVTL SL A SCTVEP KK+LPAS +TVGKLKQLC+RLFKVDTDQQV
Sbjct:  490 QVTLISLAAVSCTVEPIKKKLPASSLTVGKLKQLCKRLFKVDTDQQV 536          
BLAST of mRNA_H-paniculata_contig53478.12763.1 vs. uniprot
Match: A0A7S1C881_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C881_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 2.550e-10
Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    1 LFDRGRYRELWKLHGDAMVHSASGGAGAGVAVSNLAANMAQVTLTSLVAASCTVEPAKKRLPASMTVGKLKQLCRRLFKVDTDQQ 85
            L +  RY +L   HG  +V +A+   GA      LAA++ +VTL S+ AASCTVEP ++RLP SMT+G LK + +++FK +   Q
Sbjct:  500 LAEHPRYFDLLDEHGHVLVAAAADAGGA-----TLAASVVKVTLRSMAAASCTVEPVERRLPLSMTIGSLKVMMQKIFKCELSAQ 579          
BLAST of mRNA_H-paniculata_contig53478.12763.1 vs. uniprot
Match: A0A7S2Y046_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y046_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.940e-10
Identity = 33/84 (39.29%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    6 RYRELWKLHGDAMVHSASGGAGAGVAVSNLAANMAQVTLTSLVAASCTVEPAKKRLPASMTVGKLKQLCRRLFKVDTDQQVCMY 89
            R+REL+  H   +++   G   +G    ++A+++ +VTL SLVA+S + +P  KRL  ++T+GKLKQ+C+ LF V  D+QV  +
Sbjct:   51 RFRELYDQHAHKLLNFGDGSNISGTG--SIASSLIEVTLQSLVASSTSFDPVSKRLSITLTIGKLKQMCKGLFGVPADEQVLYF 132          
BLAST of mRNA_H-paniculata_contig53478.12763.1 vs. uniprot
Match: A0A7S2M1X1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M1X1_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.580e-8
Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = 0
Query:    6 RYRELWKLHGDAMVHSASGGAGAGVAVSNLAANMAQVTLTSLVAASCTVEPAKKRLPASMTVGKLKQLCRRLFKVDTDQQV 86
            ++  L + H D M+  A+ G G+     N+   +  VT+ S+ AASC +EP +KRLP S+ VG++K +C + F+VD D Q+
Sbjct:  216 QFNVLLEKHKDTMLSLANAGCGSSNQ-GNIGEEIINVTIRSMAAASCDMEPLRKRLPRSLKVGRIKTMCAKYFRVDIDLQM 295          
BLAST of mRNA_H-paniculata_contig53478.12763.1 vs. uniprot
Match: A0A7R9WYB4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WYB4_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 5.590e-8
Identity = 35/81 (43.21%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    6 RYRELWKLHGDAMV---HSASGGAGAGVAVSNLAANMAQVTLTSLVAASCTVEPAKKRLPASMTVGKLKQLCRRLFKVDTD 83
            +Y  L   H D +    +S +GGA +G   S L+A +A + + S+ A+SC++EP  +RLP S+TVG+LK LC R F +DTD
Sbjct:   70 QYDTLKDEHRDVIAAASNSTAGGA-SGSGGSTLSATVANLMVRSMAASSCSMEPLVRRLPGSLTVGRLKALCSRYFGLDTD 149          
BLAST of mRNA_H-paniculata_contig53478.12763.1 vs. uniprot
Match: A0A448Z797_9STRA (CAP-Gly domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z797_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 7.220e-8
Identity = 35/83 (42.17%), Postives = 48/83 (57.83%), Query Frame = 0
Query:    1 LFDRGRYRELWKLHGDAMVHSASGGAGAGVAVSNLAANMAQVTLTSLVAASCTVEPAKKRLPASMTVGKLKQLCRRLFKVDTD 83
            L D  RY EL + H         G +G G    +LAA++  +T+ S+ AASCT++P  +RLP SMTV + + LC R F VD D
Sbjct:  452 LDDHPRYPELMEKHNKLAALLTKGTSGGG----SLAASVYNLTIRSMAAASCTMDPVVRRLPGSMTVERTRALCSRAFGVDYD 530          
BLAST of mRNA_H-paniculata_contig53478.12763.1 vs. uniprot
Match: B8C5G5_THAPS (CAP-Gly domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5G5_THAPS)

HSP 1 Score: 57.4 bits (137), Expect = 1.300e-7
Identity = 32/82 (39.02%), Postives = 49/82 (59.76%), Query Frame = 0
Query:    6 RYRELWKLHGDAMVHSASGGAGAGVAVSN-LAANMAQVTLTSLVAASCTVEPAKKRLPASMTVGKLKQLCRRLFKVDTDQQV 86
            R++ L   H D M+   S  AG   + S  +  ++  VT+ S+ A+SC VEP +KRLP S+ VG++K +C R F +D D Q+
Sbjct:  456 RFKHLMTKHKDTMMALNSSAAGTDSSGSGKIGEDVINVTIRSMAASSCDVEPLQKRLPRSLQVGRIKAMCARAFGLDIDLQI 537          
BLAST of mRNA_H-paniculata_contig53478.12763.1 vs. uniprot
Match: A0A7S4UL71_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UL71_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.750e-7
Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    6 RYRELWKLHGDAMVHSASGGAGAGVAVSNLAANMAQVTLTSLVAASCTVEPAKKRLPASMTVGKLKQLCRRLFKVDTD 83
            R+ EL   H D+M+   S  +  G   +N+A +   VT+ S+ A+SC +EP +KRLP ++ VG+LK LC R F +D D
Sbjct:  401 RFDELMNKHKDSMLSIQS--SANGNTRNNIANDAINVTVRSMAASSCAMEPMRKRLPGTLKVGRLKILCSRAFGIDVD 476          
BLAST of mRNA_H-paniculata_contig53478.12763.1 vs. uniprot
Match: A0A7S4QTJ8_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QTJ8_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.790e-7
Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    6 RYRELWKLHGDAMVHSASGGAGAGVAVSNLAANMAQVTLTSLVAASCTVEPAKKRLPASMTVGKLKQLCRRLFKVDTD 83
            R+ EL   H D+M+   S  +  G   +N+A +   VT+ S+ A+SC +EP +KRLP ++ VG+LK LC R F +D D
Sbjct:  521 RFDELMNKHKDSMLSIQS--SANGNTRNNIANDAINVTVRSMAASSCAMEPMRKRLPGTLKVGRLKILCSRAFGIDVD 596          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53478.12763.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7G0Z3_ECTSI2.620e-2368.29Putative: beta-tubulin folding cofactor E n=1 Tax=... [more]
A0A6H5L3Q3_9PHAE7.660e-1482.98CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S1C881_9STRA2.550e-1043.53Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2Y046_9STRA3.940e-1039.29Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
A0A7S2M1X1_9STRA2.580e-838.27Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7R9WYB4_9STRA5.590e-843.21Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A448Z797_9STRA7.220e-842.17CAP-Gly domain-containing protein n=1 Tax=Pseudo-n... [more]
B8C5G5_THAPS1.300e-739.02CAP-Gly domain-containing protein n=1 Tax=Thalassi... [more]
A0A7S4UL71_9STRA1.750e-741.03Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4QTJ8_9STRA1.790e-741.03Hypothetical protein n=5 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 39..89
e-value: 1.1E-7
score: 34.0
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 56..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig53478contigH-paniculata_contig53478:769..1035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig53478.12763.1mRNA_H-paniculata_contig53478.12763.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig53478 769..1035 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig53478.12763.1 ID=prot_H-paniculata_contig53478.12763.1|Name=mRNA_H-paniculata_contig53478.12763.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
LFDRGRYRELWKLHGDAMVHSASGGAGAGVAVSNLAANMAQVTLTSLVAA
SCTVEPAKKRLPASMTVGKLKQLCRRLFKVDTDQQVCMY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf