mRNA_H-paniculata_contig5343.12759.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: D7FU92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU92_ECTSI) HSP 1 Score: 328 bits (840), Expect = 1.710e-99 Identity = 246/655 (37.56%), Postives = 335/655 (51.15%), Query Frame = 1
Query: 1 QIFGGFLAKTYGGKSVLALAFLLWVPASSLTA--VPAGSVQHVLVGVVACRVVIGLAQGMFLPAAHTVLGHWIPSKHRGRHFAFAMSGMYAGAATAMLSAPTLITAYGPASIFHIAGALGASWLLLWLLLGSSSPATTFRIAPGLERETARRMQTTNLPSVESP--TTGSHPSTSGTKGHARH----RSDCSDMESLLSSAQGLRHPG---FRSSDGGGVSDC--------GSTGSGGTRAQGGGAGSSNNGVTEDRNRCGGSATT--------------IMASCNDDSLEGGC--SGNRRVGPRGRRAAGVAPAVYAAAATTDA-----VGGPNVDALPPARREERADSRHLPGDCRRL----------------------PSSLMVGVSSGCASDGGCSRDXXXXSDNXXXXXXXXXXGGKSGGDEASTG--------SSSMPWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLCGVCGVYYVVAAGGDQVLFP 1755
Q+ GG++AK GGK+ L L FLLW P S+ A + +G V+VG CR+ IGLAQGMFLPAA +VLGHWIP++ RGRHFAFAMSGM+AGAA AM++ P +++ +G + F++A +GA+WL +W+ LGS +P + R + T L E T G GT R D D +++ G PG F++ G S C + GSG + +GGG G GV D C A T I DD+ G G G + G+ A AA + ++ V + PPA + A + D R +S A +G C G+ G A T ++ PW+AM AAWA V GNVG G++V+MSW PTY+ EF+ ++LE++ + + LSPYLTM+ FS+LGGV YSWLVN RG+ ++ +SKL+ G S ++ F M L + A T+ +S ALA+ A+SRGGWSTNH EI APEH +ML+SVAN +S+ SV+GI++TG LLD FGG + AWTAAMG +G LCG CGV +V+ A GD+VLFP
Sbjct: 36 QVPGGYMAKRCGGKATLGLCFLLWFPLSAALASSIRSGYAAPVVVG---CRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIVSRFGAHTAFYVAAVMGAAWLAVWICLGSDAPHS---------RREGEKFNTKALRPREGVGVTAGEDTDVDGTTRAGSEDGLPRPDAGDGSCWVAAGLGEGGPGDWSFQNPAAGSPSVCRDPALLRSSNHGSGCSAERGGGGG----GVCLD---CVERAPTEADAAAGRVVDPEPIPPGGGDDTPVGDACGGGGPACGHKSTVVCGLLVAKSAALSWDESKKVAVVCDGRTEGAPPA---DAASATSTDSDTRAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXHAASLAALEGVCEPSSS----------------GRGGRAAAKTTVVKAFERTAAPFPWRAMAACPAAWAFVAGNVGAGMGINVVMSWLPTYYEEFVLVDLEDIHIAELLSPYLTMMAFSVLGGVSYSWLVNGRGLPRARSSKLVAGAAFSLSVAVFPCMGLPRSCAAATVVSSLALASAALSRGGWSTNHMEIAAPEHAAMLYSVANSISAAASVLGISLTGKLLDTFGGGGEPQAWTAAMGTIGALCGACGVLFVLFARGDEVLFP 652
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A6H5JPQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ5_9PHAE) HSP 1 Score: 309 bits (792), Expect = 1.780e-92 Identity = 238/694 (34.29%), Postives = 325/694 (46.83%), Query Frame = 1
Query: 10 GGFLAKTYGGKSVLALAFLLWVPASSLTA--VPAGSVQHVLVGVVACRVVIGLAQGMFLPAAHTVLGHWIPSKHRGRHFAFAMSGMYAGAATAMLSAPTL---------------------------------------ITAYGPASIFHIAGALGASWLLLWLLLGSSSPATTFRIAPGLERETARRMQTTNLPSVESPTTGSHPSTSGTKGHARHRSDCSDMESLLSSAQGLRHPG---FRSSDGGGVSDCGSTGSGGTRAQGGGAGSSNNGVTEDRNRCGGSATTIMASCNDDSLEGGCSGNRRVGPRGRRAAGVAPAVYAAAATTDAVGGPNVD--ALPPARREERADSRHLP------------GDCRRLPSSLMVGVSSGCASDGGCSRDXXXXSDNXXXXXXXXXX----------------------------------------------GGKSGGDEAST--------GSSSMPWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLCGVCGVYYVVAAGGDQVLFP 1755
GG++AK YGGK+ L L FL W P S+ A + +G V+VG CR+ IGLAQGMFLPAA +VLGHWIP++ RGRHFAFAMSGM+AGAA AM++ P + ++ G + F++A +GA+WL +W+ LGS +P T R + R + + + E P +T + R + D +++ G PG F++ G S C ++ S N DS GCS R G RG V A DA G VD A+PP H P G + L+V S+ + D S+ D XX G+ G A T ++ PW+AM AAWA V GNVG G++V+MSW PTY+ EF+ ++LE++ + + LSPYLTM+ FS+LGGV YSWLVN RG+ ++ +SKL+ G S ++ M L + A T+ +S ALA+ A+SRGGWSTNH EI AP+H +ML+SVAN +S+ SV+GI++TG LLD FGG + AWTAAMG +G LCG CGV +V+ A GD+VLFP
Sbjct: 16 GGYMAKRYGGKATLGLCFLFWFPLSAALASSIRSGYAAPVVVG---CRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIGATCIVGDNMADRGRAKASTYIATKDDAFSLLCSPVGLSVSRLGAHTAFYVAAVMGAAWLAVWVCLGSDTPHTR-REGEKFNTKALRPREGVGVTAGEEPDVDG--ATRAGSEDGKPRPEAGDGSCWVAAGLGKGGPGAWSFQNPAAGSPSVC-------------------------------RDPALLRSSNHDS---GCSAQRAGGGRGV----CLDCVERAPTDADAAAGRVVDPEAIPP------GGGGHTPVGDVCGGAGPACGHKSTVVCGLLVAKSATSSLDE--SKKAPVVCDGWTEGALSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAVEDVCKPSSSGRGGRAAAKTIVMKGFERNAAPFPWRAMAACPAAWAFVAGNVGAGMGINVVMSWLPTYYEEFMLVDLEDIHIAELLSPYLTMMAFSVLGGVSYSWLVNGRGLPRARSSKLVAGAAFSLSVAVLPCMGLPRSCAAATVVSSLALASAALSRGGWSTNHMEIAAPQHAAMLYSVANSISAAASVLGISLTGKLLDTFGGGGEPEAWTAAMGTIGALCGACGVLFVLFARGDEVLFP 657
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A250WSN5_9CHLO (MFS domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WSN5_9CHLO) HSP 1 Score: 131 bits (330), Expect = 2.340e-29 Identity = 78/228 (34.21%), Postives = 119/228 (52.19%), Query Frame = 1
Query: 1093 DEASTGSSSM---------PWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLCGVCGVYYVVAAGGDQVL 1749
D A GSSS PWK M S A WA+V+ N V+M+W PTYF L + L LG L PY+ M + S +GG+ WL+ + +S K++ +G S+ VA M +A+ G T+ L AL SRGG+S NH +I AP++ ++ ++N +I+ V+G+ VTG +LD GGA ++ W A + +C + + + V A GD++
Sbjct: 218 DNARNGSSSSIGKGRPAPTPWKRMMSSPAVWAIVINNFSFHYAFYVIMNWLPTYFNSVLKVELSSLGSMKTL-PYIVMFLMSNVGGLAGDWLILQSKMSIGAGRKMVNTIGFISSAVALMLMPMASGTLRGVAATTLTLGALGFSRGGFSVNHMDI-APKYAGVVMGISNTAGTISGVIGVAVTGIILDKLGGASNLFGWFYAHALCASICMIAMMIFNVFARGDRIF 443
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A2J8A4N2_9CHLO (Putative anion transporter 7 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A4N2_9CHLO) HSP 1 Score: 131 bits (329), Expect = 2.820e-29 Identity = 75/209 (35.89%), Postives = 114/209 (54.55%), Query Frame = 1
Query: 1123 PWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLCGVCGVYYVVAAGGDQVL 1749
P++ MF S A WA+VV N G V+M+W PTYF L + L LG + PYL M S +GG WL+ KR S + K + +G S+ A M A++ G T+ L L SRGG+S NH +I AP++ M+ ++N +++ V+G+TVTG++LD FGGA++V W A + +C V + + A G+++
Sbjct: 230 PYRRMFASPAVWAIVVNNFSFHYGFYVIMNWLPTYFNHVLKVELSSLGG-AKTVPYLVMFAMSNVGGWAGDWLILKRRYSTAAGRKAVNSLGFLSSAAALMLMPGASSVTYGVAVTTLTLGCLGFSRGGFSVNHMDI-APKYAGMVMGISNTAGTVSGVIGVTVTGYILDMFGGADNVQGWYMAHAVSAAICLQAMVVFNLFARGERLF 436
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A7R9SW56_9CHLO (Hypothetical protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7R9SW56_9CHLO) HSP 1 Score: 125 bits (313), Expect = 6.410e-29 Identity = 67/189 (35.45%), Postives = 109/189 (57.67%), Query Frame = 1
Query: 1111 SSSMPWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAM 1677
SS +PW+A+ + A+ + N V+M+W PTYF + LGI L +LG ++ PYL+M V +ILGGV + + G+S +++ KL+ VG + A M +A +G + + L ++RGG+S NH ++ AP + ++ ++N +I +VG++VTG +LDAFGG E S W AA+
Sbjct: 20 SSVVPWRALVTAPPVMAIALNNFTFHYSFYVVMNWLPTYFEQLLGIRLADLGAVGKVLPYLSMFVATILGGVLGDKCITRLGMSVASSRKLVNSVGFALGAAALVGMPMADAPDSGLMFATLTLFFHGIARGGFSVNHMDV-APRYAGVVMGISNTCGTIAGIVGVSVTGMVLDAFGGGEHRSGWVAAL 207
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A2V0PH18_9CHLO (Anion transporter-like n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PH18_9CHLO) HSP 1 Score: 129 bits (324), Expect = 2.560e-28 Identity = 75/209 (35.89%), Postives = 112/209 (53.59%), Query Frame = 1
Query: 1123 PWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLCGVCGVYYVVAAGGDQVL 1749
PW+ M S A WA+V+ N V+M+W PTYF LG L +LG + +PYL M + S GG WL+ +RGV A K + G+ ++ A M A A G T+A LAAL SRGG+S NH ++ AP++ +L ++N +++ V+G+ VTG +LDA GGA + W A + G+C + A G+++
Sbjct: 282 PWRGMLGSAAVWAIVLNNFAFHYAFYVIMNWLPTYFNSVLGRELSDLGPL-RTAPYLAMFLTSNAGGWAGDWLILRRGVGVGAARKAVNTAGMLASAAALSVMPAARGALGGVALTTATLAALGFSRGGFSVNHMDV-APKYAGVLMGISNTAGTLSGVIGVAVTGRILDAAGGASVRAGWFTAHAVAAGICLKAAAVFAFFARGERLF 488
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A2K3DEV9_CHLRE (MFS domain-containing protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DEV9_CHLRE) HSP 1 Score: 127 bits (320), Expect = 4.210e-28 Identity = 72/192 (37.50%), Postives = 106/192 (55.21%), Query Frame = 1
Query: 1123 PWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLC 1698
P+K M S A WA+VV N V+M+W PTYF L + L LG + PYL M + S +GG WL+ KR S TA K++ +G S+ +A M A G T+ L L SRGG+S NH +I AP++ M+ ++N +++ V+G+ VTG++LDA+GGA++V W A + +C
Sbjct: 227 PYKRMMSSAAVWAIVVNNFSFHYAFYVIMNWLPTYFNHVLKVELNSLGG-AKTVPYLVMFLMSNVGGWAGDWLILKRRNSTGTARKIVNTLGFVSSAIALMLMPGAQGVTYGVAVTTLTLGCLGFSRGGFSVNHMDI-APKYAGMVMGISNTAGTVSGVIGVAVTGYILDAWGGADNVMGWYVAHAVSAAIC 416
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A830H8S4_9CHLO (MFS domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H8S4_9CHLO) HSP 1 Score: 125 bits (313), Expect = 4.540e-27 Identity = 67/189 (35.45%), Postives = 109/189 (57.67%), Query Frame = 1
Query: 1111 SSSMPWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAM 1677
SS +PW+A+ + A+ + N V+M+W PTYF + LGI L +LG ++ PYL+M V +ILGGV + + G+S +++ KL+ VG + A M +A +G + + L ++RGG+S NH ++ AP + ++ ++N +I +VG++VTG +LDAFGG E S W AA+
Sbjct: 241 SSVVPWRALVTAPPVMAIALNNFTFHYSFYVVMNWLPTYFEQLLGIRLADLGAVGKVLPYLSMFVATILGGVLGDKCITRLGMSVASSRKLVNSVGFALGAAALVGMPMADAPDSGLMFATLTLFFHGIARGGFSVNHMDV-APRYAGVVMGISNTCGTIAGIVGVSVTGMVLDAFGGGEHRSGWVAAL 428
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A150G433_GONPE (MFS domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G433_GONPE) HSP 1 Score: 124 bits (311), Expect = 6.280e-27 Identity = 77/225 (34.22%), Postives = 119/225 (52.89%), Query Frame = 1
Query: 1093 DEASTGSSSMP----WKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTM--ALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLCGVCGVYYVVAAGGDQVL 1749
D ++GS P ++ M S A WA+VV N V+M+W PTYF L + L LG + PYL M + S +GG WL+ +R A K++ +G S+ A M A A+ G T+ L L SRGG+S NH +I AP++ M+ ++N +++ V+G+ VTG++LDAFGGA++V W A + +CG + + V A G+++
Sbjct: 209 DRPASGSKGRPGPTPYRRMMSSPAVWAIVVNNFSFHYAFYVIMNWLPTYFNHVLKVELNSLGG-AKTVPYLVMFLMSNVGGWAGDWLITRRRSPVGAARKVVNTLGFVSSAAALMLMPGAGASGVGYGVAVTTLTLGCLGFSRGGFSVNHMDI-APKYAGMVMGISNTAGTVSGVIGVAVTGYILDAFGGADNVMGWYTAHAVSAAVCGQAMLVFNVFARGERLF 431
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A835XG38_9CHLO (MFS domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XG38_9CHLO) HSP 1 Score: 121 bits (303), Expect = 7.510e-26 Identity = 71/194 (36.60%), Postives = 108/194 (55.67%), Query Frame = 1
Query: 1123 PWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATT--AATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLC 1698
P++ M S A WA+V+ N V+M+W PTYF L + L LG + PYL M + S +GG WL+ KR S +TA K + +G S+ +A M A + A G T+ L L SRGG+S NH +I AP++ M+ ++N +++ V+G+ VTG++LDA GGA++V+ W A + +C
Sbjct: 228 PYRRMMGSAAVWAIVINNFSFHYAFYVIMNWLPTYFNHVLKVELSSLGG-AKTVPYLVMFLMSNVGGWAGDWLILKRRNSTATARKAVNTLGFVSSAIALMLMPGAGSHGIAYGVAVTTLTLGCLGFSRGGFSVNHMDI-APKYAGMVMGISNTAGTVSGVIGVAVTGYILDASGGADNVAGWYTAHAVSAAIC 419 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5343.12759.1 >prot_H-paniculata_contig5343.12759.1 ID=prot_H-paniculata_contig5343.12759.1|Name=mRNA_H-paniculata_contig5343.12759.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=617bp QIFGGFLAKTYGGKSVLALAFLLWVPASSLTAVPAGSVQHVLVGVVACRVback to top mRNA from alignment at H-paniculata_contig5343:7625..11600- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5343.12759.1 ID=mRNA_H-paniculata_contig5343.12759.1|Name=mRNA_H-paniculata_contig5343.12759.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3976bp|location=Sequence derived from alignment at H-paniculata_contig5343:7625..11600- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5343:7625..11600- >mRNA_H-paniculata_contig5343.12759.1 ID=mRNA_H-paniculata_contig5343.12759.1|Name=mRNA_H-paniculata_contig5343.12759.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3702bp|location=Sequence derived from alignment at H-paniculata_contig5343:7625..11600- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |