mRNA_H-paniculata_contig5343.12759.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5343.12759.1
Unique NamemRNA_H-paniculata_contig5343.12759.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: D7FU92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU92_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 1.710e-99
Identity = 246/655 (37.56%), Postives = 335/655 (51.15%), Query Frame = 1
Query:    1 QIFGGFLAKTYGGKSVLALAFLLWVPASSLTA--VPAGSVQHVLVGVVACRVVIGLAQGMFLPAAHTVLGHWIPSKHRGRHFAFAMSGMYAGAATAMLSAPTLITAYGPASIFHIAGALGASWLLLWLLLGSSSPATTFRIAPGLERETARRMQTTNLPSVESP--TTGSHPSTSGTKGHARH----RSDCSDMESLLSSAQGLRHPG---FRSSDGGGVSDC--------GSTGSGGTRAQGGGAGSSNNGVTEDRNRCGGSATT--------------IMASCNDDSLEGGC--SGNRRVGPRGRRAAGVAPAVYAAAATTDA-----VGGPNVDALPPARREERADSRHLPGDCRRL----------------------PSSLMVGVSSGCASDGGCSRDXXXXSDNXXXXXXXXXXGGKSGGDEASTG--------SSSMPWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLCGVCGVYYVVAAGGDQVLFP 1755
            Q+ GG++AK  GGK+ L L FLLW P S+  A  + +G    V+VG   CR+ IGLAQGMFLPAA +VLGHWIP++ RGRHFAFAMSGM+AGAA AM++ P +++ +G  + F++A  +GA+WL +W+ LGS +P +         R    +  T  L   E    T G      GT          R D  D    +++  G   PG   F++   G  S C         + GSG +  +GGG G    GV  D   C   A T              I     DD+  G     G    G +     G+  A  AA +  ++     V     +  PPA   + A +     D R                                +S  A +G C                     G+ G   A T         ++  PW+AM    AAWA V GNVG   G++V+MSW PTY+ EF+ ++LE++ + + LSPYLTM+ FS+LGGV YSWLVN RG+ ++ +SKL+ G   S ++  F  M L  + A  T+ +S ALA+ A+SRGGWSTNH EI APEH +ML+SVAN +S+  SV+GI++TG LLD FGG  +  AWTAAMG +G LCG CGV +V+ A GD+VLFP
Sbjct:   36 QVPGGYMAKRCGGKATLGLCFLLWFPLSAALASSIRSGYAAPVVVG---CRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIVSRFGAHTAFYVAAVMGAAWLAVWICLGSDAPHS---------RREGEKFNTKALRPREGVGVTAGEDTDVDGTTRAGSEDGLPRPDAGDGSCWVAAGLGEGGPGDWSFQNPAAGSPSVCRDPALLRSSNHGSGCSAERGGGGG----GVCLD---CVERAPTEADAAAGRVVDPEPIPPGGGDDTPVGDACGGGGPACGHKSTVVCGLLVAKSAALSWDESKKVAVVCDGRTEGAPPA---DAASATSTDSDTRAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXHAASLAALEGVCEPSSS----------------GRGGRAAAKTTVVKAFERTAAPFPWRAMAACPAAWAFVAGNVGAGMGINVVMSWLPTYYEEFVLVDLEDIHIAELLSPYLTMMAFSVLGGVSYSWLVNGRGLPRARSSKLVAGAAFSLSVAVFPCMGLPRSCAAATVVSSLALASAALSRGGWSTNHMEIAAPEHAAMLYSVANSISAAASVLGISLTGKLLDTFGGGGEPQAWTAAMGTIGALCGACGVLFVLFARGDEVLFP 652          
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A6H5JPQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ5_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 1.780e-92
Identity = 238/694 (34.29%), Postives = 325/694 (46.83%), Query Frame = 1
Query:   10 GGFLAKTYGGKSVLALAFLLWVPASSLTA--VPAGSVQHVLVGVVACRVVIGLAQGMFLPAAHTVLGHWIPSKHRGRHFAFAMSGMYAGAATAMLSAPTL---------------------------------------ITAYGPASIFHIAGALGASWLLLWLLLGSSSPATTFRIAPGLERETARRMQTTNLPSVESPTTGSHPSTSGTKGHARHRSDCSDMESLLSSAQGLRHPG---FRSSDGGGVSDCGSTGSGGTRAQGGGAGSSNNGVTEDRNRCGGSATTIMASCNDDSLEGGCSGNRRVGPRGRRAAGVAPAVYAAAATTDAVGGPNVD--ALPPARREERADSRHLP------------GDCRRLPSSLMVGVSSGCASDGGCSRDXXXXSDNXXXXXXXXXX----------------------------------------------GGKSGGDEAST--------GSSSMPWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLCGVCGVYYVVAAGGDQVLFP 1755
            GG++AK YGGK+ L L FL W P S+  A  + +G    V+VG   CR+ IGLAQGMFLPAA +VLGHWIP++ RGRHFAFAMSGM+AGAA AM++ P +                                       ++  G  + F++A  +GA+WL +W+ LGS +P T  R       +  R  +   + + E P      +T       + R +  D    +++  G   PG   F++   G  S C                                   ++ S N DS   GCS  R  G RG         V  A    DA  G  VD  A+PP          H P            G    +   L+V  S+  + D   S+      D         XX                                               G+ G   A T         ++  PW+AM    AAWA V GNVG   G++V+MSW PTY+ EF+ ++LE++ + + LSPYLTM+ FS+LGGV YSWLVN RG+ ++ +SKL+ G   S ++     M L  + A  T+ +S ALA+ A+SRGGWSTNH EI AP+H +ML+SVAN +S+  SV+GI++TG LLD FGG  +  AWTAAMG +G LCG CGV +V+ A GD+VLFP
Sbjct:   16 GGYMAKRYGGKATLGLCFLFWFPLSAALASSIRSGYAAPVVVG---CRLGIGLAQGMFLPAAQSVLGHWIPARRRGRHFAFAMSGMFAGAAIAMVTVPPIGATCIVGDNMADRGRAKASTYIATKDDAFSLLCSPVGLSVSRLGAHTAFYVAAVMGAAWLAVWVCLGSDTPHTR-REGEKFNTKALRPREGVGVTAGEEPDVDG--ATRAGSEDGKPRPEAGDGSCWVAAGLGKGGPGAWSFQNPAAGSPSVC-------------------------------RDPALLRSSNHDS---GCSAQRAGGGRGV----CLDCVERAPTDADAAAGRVVDPEAIPP------GGGGHTPVGDVCGGAGPACGHKSTVVCGLLVAKSATSSLDE--SKKAPVVCDGWTEGALSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAVEDVCKPSSSGRGGRAAAKTIVMKGFERNAAPFPWRAMAACPAAWAFVAGNVGAGMGINVVMSWLPTYYEEFMLVDLEDIHIAELLSPYLTMMAFSVLGGVSYSWLVNGRGLPRARSSKLVAGAAFSLSVAVLPCMGLPRSCAAATVVSSLALASAALSRGGWSTNHMEIAAPQHAAMLYSVANSISAAASVLGISLTGKLLDTFGGGGEPEAWTAAMGTIGALCGACGVLFVLFARGDEVLFP 657          
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A250WSN5_9CHLO (MFS domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WSN5_9CHLO)

HSP 1 Score: 131 bits (330), Expect = 2.340e-29
Identity = 78/228 (34.21%), Postives = 119/228 (52.19%), Query Frame = 1
Query: 1093 DEASTGSSSM---------PWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLCGVCGVYYVVAAGGDQVL 1749
            D A  GSSS          PWK M  S A WA+V+ N        V+M+W PTYF   L + L  LG    L PY+ M + S +GG+   WL+ +  +S     K++  +G  S+ VA   M +A+    G   T+  L AL  SRGG+S NH +I AP++  ++  ++N   +I+ V+G+ VTG +LD  GGA ++  W  A  +   +C +  + + V A GD++ 
Sbjct:  218 DNARNGSSSSIGKGRPAPTPWKRMMSSPAVWAIVINNFSFHYAFYVIMNWLPTYFNSVLKVELSSLGSMKTL-PYIVMFLMSNVGGLAGDWLILQSKMSIGAGRKMVNTIGFISSAVALMLMPMASGTLRGVAATTLTLGALGFSRGGFSVNHMDI-APKYAGVVMGISNTAGTISGVIGVAVTGIILDKLGGASNLFGWFYAHALCASICMIAMMIFNVFARGDRIF 443          
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A2J8A4N2_9CHLO (Putative anion transporter 7 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A4N2_9CHLO)

HSP 1 Score: 131 bits (329), Expect = 2.820e-29
Identity = 75/209 (35.89%), Postives = 114/209 (54.55%), Query Frame = 1
Query: 1123 PWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLCGVCGVYYVVAAGGDQVL 1749
            P++ MF S A WA+VV N     G  V+M+W PTYF   L + L  LG   +  PYL M   S +GG    WL+ KR  S +   K +  +G  S+  A   M  A++   G   T+  L  L  SRGG+S NH +I AP++  M+  ++N   +++ V+G+TVTG++LD FGGA++V  W  A  +   +C    V + + A G+++ 
Sbjct:  230 PYRRMFASPAVWAIVVNNFSFHYGFYVIMNWLPTYFNHVLKVELSSLGG-AKTVPYLVMFAMSNVGGWAGDWLILKRRYSTAAGRKAVNSLGFLSSAAALMLMPGASSVTYGVAVTTLTLGCLGFSRGGFSVNHMDI-APKYAGMVMGISNTAGTVSGVIGVTVTGYILDMFGGADNVQGWYMAHAVSAAICLQAMVVFNLFARGERLF 436          
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A7R9SW56_9CHLO (Hypothetical protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7R9SW56_9CHLO)

HSP 1 Score: 125 bits (313), Expect = 6.410e-29
Identity = 67/189 (35.45%), Postives = 109/189 (57.67%), Query Frame = 1
Query: 1111 SSSMPWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAM 1677
            SS +PW+A+  +    A+ + N        V+M+W PTYF + LGI L +LG   ++ PYL+M V +ILGGV     + + G+S +++ KL+  VG +    A   M +A    +G +  +  L    ++RGG+S NH ++ AP +  ++  ++N   +I  +VG++VTG +LDAFGG E  S W AA+
Sbjct:   20 SSVVPWRALVTAPPVMAIALNNFTFHYSFYVVMNWLPTYFEQLLGIRLADLGAVGKVLPYLSMFVATILGGVLGDKCITRLGMSVASSRKLVNSVGFALGAAALVGMPMADAPDSGLMFATLTLFFHGIARGGFSVNHMDV-APRYAGVVMGISNTCGTIAGIVGVSVTGMVLDAFGGGEHRSGWVAAL 207          
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A2V0PH18_9CHLO (Anion transporter-like n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PH18_9CHLO)

HSP 1 Score: 129 bits (324), Expect = 2.560e-28
Identity = 75/209 (35.89%), Postives = 112/209 (53.59%), Query Frame = 1
Query: 1123 PWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLCGVCGVYYVVAAGGDQVL 1749
            PW+ M  S A WA+V+ N        V+M+W PTYF   LG  L +LG   + +PYL M + S  GG    WL+ +RGV    A K +   G+ ++  A   M  A  A  G   T+A LAAL  SRGG+S NH ++ AP++  +L  ++N   +++ V+G+ VTG +LDA GGA   + W  A  +  G+C      +   A G+++ 
Sbjct:  282 PWRGMLGSAAVWAIVLNNFAFHYAFYVIMNWLPTYFNSVLGRELSDLGPL-RTAPYLAMFLTSNAGGWAGDWLILRRGVGVGAARKAVNTAGMLASAAALSVMPAARGALGGVALTTATLAALGFSRGGFSVNHMDV-APKYAGVLMGISNTAGTLSGVIGVAVTGRILDAAGGASVRAGWFTAHAVAAGICLKAAAVFAFFARGERLF 488          
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A2K3DEV9_CHLRE (MFS domain-containing protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DEV9_CHLRE)

HSP 1 Score: 127 bits (320), Expect = 4.210e-28
Identity = 72/192 (37.50%), Postives = 106/192 (55.21%), Query Frame = 1
Query: 1123 PWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLC 1698
            P+K M  S A WA+VV N        V+M+W PTYF   L + L  LG   +  PYL M + S +GG    WL+ KR  S  TA K++  +G  S+ +A   M  A     G   T+  L  L  SRGG+S NH +I AP++  M+  ++N   +++ V+G+ VTG++LDA+GGA++V  W  A  +   +C
Sbjct:  227 PYKRMMSSAAVWAIVVNNFSFHYAFYVIMNWLPTYFNHVLKVELNSLGG-AKTVPYLVMFLMSNVGGWAGDWLILKRRNSTGTARKIVNTLGFVSSAIALMLMPGAQGVTYGVAVTTLTLGCLGFSRGGFSVNHMDI-APKYAGMVMGISNTAGTVSGVIGVAVTGYILDAWGGADNVMGWYVAHAVSAAIC 416          
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A830H8S4_9CHLO (MFS domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H8S4_9CHLO)

HSP 1 Score: 125 bits (313), Expect = 4.540e-27
Identity = 67/189 (35.45%), Postives = 109/189 (57.67%), Query Frame = 1
Query: 1111 SSSMPWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAM 1677
            SS +PW+A+  +    A+ + N        V+M+W PTYF + LGI L +LG   ++ PYL+M V +ILGGV     + + G+S +++ KL+  VG +    A   M +A    +G +  +  L    ++RGG+S NH ++ AP +  ++  ++N   +I  +VG++VTG +LDAFGG E  S W AA+
Sbjct:  241 SSVVPWRALVTAPPVMAIALNNFTFHYSFYVVMNWLPTYFEQLLGIRLADLGAVGKVLPYLSMFVATILGGVLGDKCITRLGMSVASSRKLVNSVGFALGAAALVGMPMADAPDSGLMFATLTLFFHGIARGGFSVNHMDV-APRYAGVVMGISNTCGTIAGIVGVSVTGMVLDAFGGGEHRSGWVAAL 428          
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A150G433_GONPE (MFS domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G433_GONPE)

HSP 1 Score: 124 bits (311), Expect = 6.280e-27
Identity = 77/225 (34.22%), Postives = 119/225 (52.89%), Query Frame = 1
Query: 1093 DEASTGSSSMP----WKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTM--ALATTAATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLCGVCGVYYVVAAGGDQVL 1749
            D  ++GS   P    ++ M  S A WA+VV N        V+M+W PTYF   L + L  LG   +  PYL M + S +GG    WL+ +R      A K++  +G  S+  A   M  A A+    G   T+  L  L  SRGG+S NH +I AP++  M+  ++N   +++ V+G+ VTG++LDAFGGA++V  W  A  +   +CG   + + V A G+++ 
Sbjct:  209 DRPASGSKGRPGPTPYRRMMSSPAVWAIVVNNFSFHYAFYVIMNWLPTYFNHVLKVELNSLGG-AKTVPYLVMFLMSNVGGWAGDWLITRRRSPVGAARKVVNTLGFVSSAAALMLMPGAGASGVGYGVAVTTLTLGCLGFSRGGFSVNHMDI-APKYAGMVMGISNTAGTVSGVIGVAVTGYILDAFGGADNVMGWYTAHAVSAAVCGQAMLVFNVFARGERLF 431          
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Match: A0A835XG38_9CHLO (MFS domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XG38_9CHLO)

HSP 1 Score: 121 bits (303), Expect = 7.510e-26
Identity = 71/194 (36.60%), Postives = 108/194 (55.67%), Query Frame = 1
Query: 1123 PWKAMFCSRAAWAVVVGNVGCSTGVSVMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNKRGVSKSTASKLITGVGLSSALVAFFTMALATT--AATGTLTTSAALAALAVSRGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAEDVSAWTAAMGMVGGLC 1698
            P++ M  S A WA+V+ N        V+M+W PTYF   L + L  LG   +  PYL M + S +GG    WL+ KR  S +TA K +  +G  S+ +A   M  A +   A G   T+  L  L  SRGG+S NH +I AP++  M+  ++N   +++ V+G+ VTG++LDA GGA++V+ W  A  +   +C
Sbjct:  228 PYRRMMGSAAVWAIVINNFSFHYAFYVIMNWLPTYFNHVLKVELSSLGG-AKTVPYLVMFLMSNVGGWAGDWLILKRRNSTATARKAVNTLGFVSSAIALMLMPGAGSHGIAYGVAVTTLTLGCLGFSRGGFSVNHMDI-APKYAGMVMGISNTAGTVSGVIGVAVTGYILDASGGADNVAGWYTAHAVSAAIC 419          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5343.12759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU92_ECTSI1.710e-9937.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPQ5_9PHAE1.780e-9234.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A250WSN5_9CHLO2.340e-2934.21MFS domain-containing protein n=1 Tax=Chlamydomona... [more]
A0A2J8A4N2_9CHLO2.820e-2935.89Putative anion transporter 7 n=1 Tax=Tetrabaena so... [more]
A0A7R9SW56_9CHLO6.410e-2935.45Hypothetical protein n=1 Tax=Pycnococcus provasoli... [more]
A0A2V0PH18_9CHLO2.560e-2835.89Anion transporter-like n=1 Tax=Raphidocelis subcap... [more]
A0A2K3DEV9_CHLRE4.210e-2837.50MFS domain-containing protein n=4 Tax=Chlamydomona... [more]
A0A830H8S4_9CHLO4.540e-2735.45MFS domain-containing protein n=1 Tax=Pycnococcus ... [more]
A0A150G433_GONPE6.280e-2734.22MFS domain-containing protein n=1 Tax=Gonium pecto... [more]
A0A835XG38_9CHLO7.510e-2636.60MFS domain-containing protein n=1 Tax=Edaphochlamy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5343contigH-paniculata_contig5343:7625..11600 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score337.8
Seed ortholog evalue1.1e-89
Seed eggNOG ortholog2880.D7FU92
KEGG koko:K08193,ko:K12301,ko:K12303
KEGG TC2.A.1.14,2.A.1.14.10,2.A.1.14.21
KEGG Pathwayko04142,map04142
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.transmembrane transport
EggNOG OGsKOG2532@1,KOG2532@2759
Ec32 ortholog descriptionMajor facilitator superfamily domain
Ec32 orthologEc-18_001330.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons4
Model size1852
Cds size1851
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5343.12759.1prot_H-paniculata_contig5343.12759.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5343 7626..11600 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930543.9453323-CDS-H-paniculata_contig5343:7625..81981622930543.9453323-CDS-H-paniculata_contig5343:7625..8198Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5343 7626..8198 -
1691481341.2942138-CDS-H-paniculata_contig5343:7625..81981691481341.2942138-CDS-H-paniculata_contig5343:7625..8198Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5343 7626..8198 -
1622930543.9653847-CDS-H-paniculata_contig5343:9276..99931622930543.9653847-CDS-H-paniculata_contig5343:9276..9993Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5343 9277..9993 -
1691481341.3161185-CDS-H-paniculata_contig5343:9276..99931691481341.3161185-CDS-H-paniculata_contig5343:9276..9993Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5343 9277..9993 -
1622930543.9796472-CDS-H-paniculata_contig5343:10575..108321622930543.9796472-CDS-H-paniculata_contig5343:10575..10832Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5343 10576..10832 -
1691481341.3279266-CDS-H-paniculata_contig5343:10575..108321691481341.3279266-CDS-H-paniculata_contig5343:10575..10832Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5343 10576..10832 -
1622930543.998066-CDS-H-paniculata_contig5343:11296..116001622930543.998066-CDS-H-paniculata_contig5343:11296..11600Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5343 11297..11600 -
1691481341.3392446-CDS-H-paniculata_contig5343:11296..116001691481341.3392446-CDS-H-paniculata_contig5343:11296..11600Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5343 11297..11600 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5343.12759.1

>prot_H-paniculata_contig5343.12759.1 ID=prot_H-paniculata_contig5343.12759.1|Name=mRNA_H-paniculata_contig5343.12759.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=617bp
QIFGGFLAKTYGGKSVLALAFLLWVPASSLTAVPAGSVQHVLVGVVACRV
VIGLAQGMFLPAAHTVLGHWIPSKHRGRHFAFAMSGMYAGAATAMLSAPT
LITAYGPASIFHIAGALGASWLLLWLLLGSSSPATTFRIAPGLERETARR
MQTTNLPSVESPTTGSHPSTSGTKGHARHRSDCSDMESLLSSAQGLRHPG
FRSSDGGGVSDCGSTGSGGTRAQGGGAGSSNNGVTEDRNRCGGSATTIMA
SCNDDSLEGGCSGNRRVGPRGRRAAGVAPAVYAAAATTDAVGGPNVDALP
PARREERADSRHLPGDCRRLPSSLMVGVSSGCASDGGCSRDRNCSSDNDN
DNDNDAGAGGKSGGDEASTGSSSMPWKAMFCSRAAWAVVVGNVGCSTGVS
VMMSWQPTYFREFLGINLEELGVFDQLSPYLTMLVFSILGGVWYSWLVNK
RGVSKSTASKLITGVGLSSALVAFFTMALATTAATGTLTTSAALAALAVS
RGGWSTNHAEICAPEHGSMLFSVANCVSSITSVVGITVTGWLLDAFGGAE
DVSAWTAAMGMVGGLCGVCGVYYVVAAGGDQVLFPGSFSGSLSEGIGGGG
VIAGSASGSGGGETEDR
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mRNA from alignment at H-paniculata_contig5343:7625..11600-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5343.12759.1 ID=mRNA_H-paniculata_contig5343.12759.1|Name=mRNA_H-paniculata_contig5343.12759.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3976bp|location=Sequence derived from alignment at H-paniculata_contig5343:7625..11600- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGATATTTGGGGGATTCCTGGCGAAAACATACGGCGGCAAGTCAGTGTT GGCTCTGGCGTTCTTGTTGTGGGTACCTGCTTCATCATTAACGGCTGTGC CGGCCGGCAGCGTGCAGCATGTCTTGGTTGGCGTGGTGGCGTGTAGGGTT GTGATTGGACTGGCACAGGGGATGTTTTTGCCCGCCGCTCATACTGTTCT GGGGCACTGGATTCCCTCGAAGCACCGAGGGCGCCACTTCGCATTTGCTA TGTCTGGAATGTACGCGGGTGCAGCCACGGCTATGCTTTCGGCGCCGACT TTGAGTGAGTCCTTGTTCGTACATGTGAAGCGTTGTGTTGTGCTGTTCAG TTGGTAGGTATTTTTGGTGCTCACATGGGGGCGCACGACATGCGAAGTGG CATTTATGTCTGTATTGTACGTCACTCTTCATTTCAGAAGTGCTCGTAAA CGGGAAAATAGAGAAGGCTTGTACTACTGATGGCGACTTGTTTCGGGCCA GCCGTACACATGTCGCTGCATTTATAGTGCAAAATGCGCGCTACATTTGG CTTCATTGAAAGAAGCCATGCACGTGCAATGCAGACTCCACTCCTGTCCT GTCCTGTCCTGTCCTGTCGCTAAGCTCTGTCCCGTGCACCTCTTAACATT GTACCGCACGTCGTAGCAGTGGTAAATCGTGTCCATGCCGACAAGGTGAC CTTCCCGACGTCCTCCCTCTTTCATCTATTCGTTTTTTTTCGTACCATAT TTTTTCTCACACTTGCAGTCACGGCCTACGGCCCGGCCTCCATCTTCCAC ATCGCCGGCGCCTTGGGCGCGAGCTGGCTGCTCCTCTGGCTCTTGCTCGG CTCCAGCTCTCCTGCCACAACATTCCGAATAGCACCAGGACTAGAACGAG AAACAGCGCGCAGAATGCAAACAACAAACTTGCCCTCGGTGGAAAGTCCA ACAACAGGGTCCCATCCGAGCACATCGGGCACGAAAGGGCACGCCAGACA CCGAAGCGATTGCTCCGACATGGAAGTAGAGGAGGAGGAGGAATCGCGCA CAGACGCATGGAAGGATTTCGGGATCCCGGCGCCGAGTTCCGACTGGTTC TCATTTTCCAACTTCGCTTTGTACGAGCAGTGCTCTTGGGAGGCGGACCA GCTCAGCAAATTTCCTTCGTCGAGTTCGCTGTGCTCGCCGACCCCGTCTC CCGTAACCGGCCCCTCGTTTCCGCGCTCGATAACATCGCTGTATCCTCAA GAGTCGGAAAAGACGACGGTGGTATGGAATGGCCACCATCTTGGCCGACA TTCCAGGGTACCGCTTGGAGCTCCCAGTGGCCGATCACGCATGGCGTACG GCGATTGCCACAGCGGTAGTAGTGGTGGTGGTGGTGGTGGTGGTAGTAGA CATGGAGGTACAAGAGCGGATCGGTCTATATCGGGTGGTACCTCCAGACG TGGCGAGAACAGCAAAGGTAATGGCAGCGACCCGGACGGCAGGACCCAGA GTTCGAGTACATCAACTGCACCTGCCACGCCAAACTCGATACGGAGTTCG TCTATCGATGCCCAGCATCGACTTAGCGGCCATTTTGTCACTGTGCAACG GCTCCAGTCATTATTGTCGTCAGCACAAGGACTACGACACCCCGGTTTCC GTTCCAGCGATGGAGGTGGAGTTTCGGATTGCGGCAGCACTGGTAGTGGC GGCACTCGGGCACAGGGCGGTGGTGCAGGTAGCAGCAACAACGGCGTGAC CGAAGACCGTAATCGGTGCGGCGGCAGCGCAACAACCATAATGGCGAGTT GCAATGACGACAGCTTGGAGGGAGGGTGCAGTGGAAACCGCCGCGTCGGA CCGCGGGGAAGACGAGCAGCTGGTGTAGCTCCTGCTGTTTATGCTGCTGC TGCTACTACTGATGCTGTTGGTGGTCCAAATGTTGATGCACTTCCACCTG CCCGTCGGGAGGAACGAGCCGATTCGCGGCATCTCCCGGGAGACTGCAGG CGACTGCCTTCGAGTCTCATGGTCGGGGTCAGTTCAGGATGTGCCAGCGA CGGTGGCTGCTCCCGTGATCGCAATTGCAGCAGCGACAACGACAACGACA ACGACAACGACGCTGGCGCTGGTGGTAAGAGTGGTGGCGACGAGGCAAGC ACTGGTTCGTCTTCGATGCCCTGGAAAGCGATGTTCTGCAGTCGGGCGGC GTGGGCGGTCGTGGTCGGGAACGTCGGGTGCAGCACGGGTGTCTCGGTCA TGATGAGCTGGCAACCAACCTATTTCAGGGAATTTCTTGGCATCAACCTC GAGGAACTCGGCGTATTTGACCAGGTCTGTTTCTCAAATGTTCATGCATT CATGATTATCTTCTTGTCCTGAAGTAATGTAGCCGAATGGAATGCTGGAT GCTGTATGACCTATTGATCTATTTACTTGGCTATTTCTTTTCACGACCCT CGTAAGAGCTAGACGAGATAAAGCCAGAAGACACTTGACACCTTTTTTAG TTCAAATCTTACTGTACATACATACATGCATACATACATACATACACGCA ATTTGCGCCTACAGGAAAATATACATAACTACAACAGTAGCACATATAAC CGCAAGAACAACGAGCATCTTTATCGAATTGCTGATGCACAACCAGAGTG TTGTATTGTATCACAGCTGCGTATTGATCATCCATTCCTACAAGCTGGGC CCACCAAGACAGGCAAAAAACCTTCGCGGAGTCAGTCTCATTCGAAATTT GGGAGTTTTGACCTAAAATTGTGAGGAAATGAGCGCACCATGGATATCGA GGTTTCAATGGAGTGAGCGTTTTTTTTTCTCAGGGTTTGCAGACATTTTC CTGATTTTCGGTTTCCAAGTTCCGTCCATATCTCAAGAGCAAAAAATAAA AATGCACGCTCCATTAAAACCTGGGTATGCATGATGCGCTCATGTCCTCA AGATTTCAGGTCAACATTCCCAAAATTCGAACGAGACTGACCTGTTGAAT ATATCCGTAGTACCAGCGTCCAAATTCCGTACATTTTTGTAGATATTTTC CCCAATGTTTTGCTCGTTATAACTTTTAAACGACGATAAATAAGGAGTCG AAAGAAGTATATTCTTCTCGATGTAGTATCGACGAAAGGTACATACTTTT TCAGGACGATCAGGCACAATGTCGATTATCTTGAAATTTGTACCAAAACT GCCTGTAATGAAGAACAAGTATACAAATTGCCGATCCGAGCGTGCGGTGC ACTCCGGGATGCTTTTAGGGCTGCAAGAAACCCCATAATTGCGGTCCAGA ACTCATTTTTCGTGTGTTTGGTCCGTCGACTATTTTTGCGCCTTCTTGGT GGACCCAACCTGTACGCATAACCCCCCCTCACCCATCCACCCCTTTCGAC AGCTATCCCCGTACCTGACGATGTTGGTGTTTTCGATCCTGGGAGGCGTA TGGTACTCATGGCTGGTTAACAAACGTGGAGTGTCCAAATCCACCGCATC GAAGCTGATCACCGGTGTCGGACTCTCGTCGGCCCTCGTGGCGTTCTTCA CCATGGCACTCGCTACGACGGCGGCCACGGGCACCCTGACCACTTCCGCC GCTCTTGCCGCCTTGGCCGTCTCTCGGGGCGGTTGGTCCACGAATCACGC CGAGATTTGCGCTCCCGAGCACGGCTCCATGCTCTTTTCGGTGGCCAACT GCGTCAGTTCCATCACGAGCGTCGTCGGGATCACCGTCACCGGGTGGTTG CTCGACGCGTTTGGCGGAGCCGAGGATGTCAGCGCATGGACAGCGGCGAT GGGCATGGTCGGCGGTCTCTGCGGCGTGTGCGGAGTGTATTACGTGGTGG CTGCGGGTGGAGACCAAGTGTTGTTCCCGGGATCCTTCTCTGGCTCGTTG TCGGAAGGTATCGGCGGCGGTGGTGTTATTGCTGGTAGTGCTAGTGGTAG CGGCGGTGGTGAGACGGAGGACAGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig5343:7625..11600-

>mRNA_H-paniculata_contig5343.12759.1 ID=mRNA_H-paniculata_contig5343.12759.1|Name=mRNA_H-paniculata_contig5343.12759.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3702bp|location=Sequence derived from alignment at H-paniculata_contig5343:7625..11600- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGATATTTGGGGGATTCCTGGCGAAAACATACGGCGGCAAGTCAGTGTT
GGCTCTGGCGTTCTTGTTGTGGGTACCTGCTTCATCATTAACGGCTGTGC
CGGCCGGCAGCGTGCAGCATGTCTTGGTTGGCGTGGTGGCGTGTAGGGTT
GTGATTGGACTGGCACAGGGGATGTTTTTGCCCGCCGCTCATACTGTTCT
GGGGCACTGGATTCCCTCGAAGCACCGAGGGCGCCACTTCGCATTTGCTA
TGTCTGGAATGTACGCGGGTGCAGCCACGGCTATGCTTTCGGCGCCGACT
TTGACAGATATTTGGGGGATTCCTGGCGAAAACATACGGCGGCAAGTCAG
TGTTGGCTCTGGCGTTCTTGTTGTGGGTACCTGCTTCATCATTAACGGCT
GTGCCGGCCGGCAGCGTGCAGCATGTCTTGGTTGGCGTGGTGGCGTGTAG
GGTTGTGATTGGACTGGCACAGGGGATGTTTTTGCCCGCCGCTCATACTG
TTCTGGGGCACTGGATTCCCTCGAAGCACCGAGGGCGCCACTTCGCATTT
GCTATGTCTGGAATGTACGCGGGTGCAGCCACGGCTATGCTTTCGGCGCC
GACTTTGATCACGGCCTACGGCCCGGCCTCCATCTTCCACATCGCCGGCG
CCTTGGGCGCGAGCTGGCTGCTCCTCTGGCTCTTGCTCGGCTCCAGCTCT
CCTGCCACAACATTCCGAATAGCACCAGGACTAGAACGAGAAACAGCGCG
CAGAATGCAAACAACAAACTTGCCCTCGGTGGAAAGTCCAACAACAGGGT
CCCATCCGAGCACATCGGGCACGAAAGGGCACGCCAGACACCGAAGCGAT
TGCTCCGACATGGAATCACGGCCTACGGCCCGGCCTCCATCTTCCACATC
GCCGGCGCCTTGGGCGCGAGCTGGCTGCTCCTCTGGCTCTTGCTCGGCTC
CAGCTCTCCTGCCACAACATTCCGAATAGCACCAGGACTAGAACGAGAAA
CAGCGCGCAGAATGCAAACAACAAACTTGCCCTCGGTGGAAAGTCCAACA
ACAGGGTCCCATCCGAGCACATCGGGCACGAAAGGGCACGCCAGACACCG
AAGCGATTGCTCCGACATGGAATCATTATTGTCGTCAGCACAAGGACTAC
GACACCCCGGTTTCCGTTCCAGCGATGGAGGTGGAGTTTCGGATTGCGGC
AGCACTGGTAGTGGCGGCACTCGGGCACAGGGCGGTGGTGCAGGTAGCAG
CAACAACGGCGTGACCGAAGACCGTAATCGGTGCGGCGGCAGCGCAACAA
CCATAATGGCGAGTTGCAATGACGACAGCTTGGAGGGAGGGTGCAGTGGA
AACCGCCGCGTCGGACCGCGGGGAAGACGAGCAGCTGGTGTAGCTCCTGC
TGTTTATGCTGCTGCTGCTACTACTGATGCTGTTGGTGGTCCAAATGTTG
ATGCACTTCCACCTGCCCGTCGGGAGGAACGAGCCGATTCGCGGCATCTC
CCGGGAGACTGCAGGCGACTGCCTTCGAGTCTCATGGTCGGGGTCAGTTC
AGGATGTGCCAGCGACGGTGGCTGCTCCCGTGATCGCAATTGCAGCAGCG
ACAACGACAACGACAACGACAACGACGCTGGCGCTGGTGGTAAGAGTGGT
GGCGACGAGGCAAGCACTGGTTCGTCTTCGATGCCCTGGAAAGCGATGTT
CTGCAGTCGGGCGGCGTGGGCGGTCGTGGTCGGGAACGTCGGGTGCAGCA
CGGGTGTCTCGGTCATGATGAGCTGGCAACCAACCTATTTCAGGGAATTT
CTTGGCATCAACCTCGAGGAACTCGGCGTATTTGACCAGTCATTATTGTC
GTCAGCACAAGGACTACGACACCCCGGTTTCCGTTCCAGCGATGGAGGTG
GAGTTTCGGATTGCGGCAGCACTGGTAGTGGCGGCACTCGGGCACAGGGC
GGTGGTGCAGGTAGCAGCAACAACGGCGTGACCGAAGACCGTAATCGGTG
CGGCGGCAGCGCAACAACCATAATGGCGAGTTGCAATGACGACAGCTTGG
AGGGAGGGTGCAGTGGAAACCGCCGCGTCGGACCGCGGGGAAGACGAGCA
GCTGGTGTAGCTCCTGCTGTTTATGCTGCTGCTGCTACTACTGATGCTGT
TGGTGGTCCAAATGTTGATGCACTTCCACCTGCCCGTCGGGAGGAACGAG
CCGATTCGCGGCATCTCCCGGGAGACTGCAGGCGACTGCCTTCGAGTCTC
ATGGTCGGGGTCAGTTCAGGATGTGCCAGCGACGGTGGCTGCTCCCGTGA
TCGCAATTGCAGCAGCGACAACGACAACGACAACGACAACGACGCTGGCG
CTGGTGGTAAGAGTGGTGGCGACGAGGCAAGCACTGGTTCGTCTTCGATG
CCCTGGAAAGCGATGTTCTGCAGTCGGGCGGCGTGGGCGGTCGTGGTCGG
GAACGTCGGGTGCAGCACGGGTGTCTCGGTCATGATGAGCTGGCAACCAA
CCTATTTCAGGGAATTTCTTGGCATCAACCTCGAGGAACTCGGCGTATTT
GACCAGCTATCCCCGTACCTGACGATGTTGGTGTTTTCGATCCTGGGAGG
CGTATGGTACTCATGGCTGGTTAACAAACGTGGAGTGTCCAAATCCACCG
CATCGAAGCTGATCACCGGTGTCGGACTCTCGTCGGCCCTCGTGGCGTTC
TTCACCATGGCACTCGCTACGACGGCGGCCACGGGCACCCTGACCACTTC
CGCCGCTCTTGCCGCCTTGGCCGTCTCTCGGGGCGGTTGGTCCACGAATC
ACGCCGAGATTTGCGCTCCCGAGCACGGCTCCATGCTCTTTTCGGTGGCC
AACTGCGTCAGTTCCATCACGAGCGTCGTCGGGATCACCGTCACCGGGTG
GTTGCTCGACGCGTTTGGCGGAGCCGAGGATGTCAGCGCATGGACAGCGG
CGATGGGCATGGTCGGCGGTCTCTGCGGCGTGTGCGGAGTGTATTACGTG
GTGGCTGCGGGTGGAGACCAAGTGTTGTTCCCGGGATCCTTCTCTGGCTC
GTTGTCGGAAGGTATCGGCGGCGGTGGTGTTATTGCTGGTAGTGCTAGTG
GTAGCGGCGGTGGTGAGACGGAGGACAGGCTATCCCCGTACCTGACGATG
TTGGTGTTTTCGATCCTGGGAGGCGTATGGTACTCATGGCTGGTTAACAA
ACGTGGAGTGTCCAAATCCACCGCATCGAAGCTGATCACCGGTGTCGGAC
TCTCGTCGGCCCTCGTGGCGTTCTTCACCATGGCACTCGCTACGACGGCG
GCCACGGGCACCCTGACCACTTCCGCCGCTCTTGCCGCCTTGGCCGTCTC
TCGGGGCGGTTGGTCCACGAATCACGCCGAGATTTGCGCTCCCGAGCACG
GCTCCATGCTCTTTTCGGTGGCCAACTGCGTCAGTTCCATCACGAGCGTC
GTCGGGATCACCGTCACCGGGTGGTTGCTCGACGCGTTTGGCGGAGCCGA
GGATGTCAGCGCATGGACAGCGGCGATGGGCATGGTCGGCGGTCTCTGCG
GCGTGTGCGGAGTGTATTACGTGGTGGCTGCGGGTGGAGACCAAGTGTTG
TTCCCGGGATCCTTCTCTGGCTCGTTGTCGGAAGGTATCGGCGGCGGTGG
TGTTATTGCTGGTAGTGCTAGTGGTAGCGGCGGTGGTGAGACGGAGGACA
GG
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