prot_H-paniculata_contig5342.12758.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5342.12758.1
Unique Nameprot_H-paniculata_contig5342.12758.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length514
Homology
BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A6H5JEW8_9PHAE (53EXOc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW8_9PHAE)

HSP 1 Score: 444 bits (1143), Expect = 3.000e-152
Identity = 222/275 (80.73%), Postives = 248/275 (90.18%), Query Frame = 0
Query:  186 AQSPPLTHEQLPDESIYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPLDG 460
            A  PPLTH+QLP+ESIY+LDGTSMLFRAFYGRGAGGYLA++GATEVGAVLAMGIEFAQFINEV PRYVAMAFDVGR+TTFRR+++P YKA RKP P+D+TLQ+PLAKAL+EALGCRT  +EG+EADDVMATL RW RSVGLGVVVCSSDKDMCQLVRDRVHVM PR + Y ILG +EV AKFGV+PS+LPDLFGL+GDVADNIPGVKGIG KGGSRLLE+F  LEG+FAG+  VG+M IRGSKGLQ LLS+PGIQEEAMLYREIATL DE  + G
Sbjct:    2 ADPPPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSDEVLAKFGVQPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMGIRGSKGLQTLLSQPGIQEEAMLYREIATLDDEGSVSG 276          
BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A835ZC56_9STRA (5'-3' exonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC56_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.320e-66
Identity = 112/173 (64.74%), Postives = 133/173 (76.88%), Query Frame = 0
Query:  193 HEQLPDESIYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEA 365
            H  +PDE++++LDGTSMLFRA +G+G+  YLAADGATEV AVLAMGIE AQFI EV PRY+A+AFDV R++TFRR++ P YKAHR PHP D+ LQ+PLA AL + LGC  LS  G+EADDVMATL  W RS+GL VV+ S DKDM QLVR+RVHVM PR        H EV A
Sbjct:   57 HTDVPDETLWVLDGTSMLFRAHFGKGSQSYLAADGATEVAAVLAMGIELAQFIEEVQPRYLAVAFDVDRNSTFRRQLMPTYKAHRPPHPRDLLLQLPLATALTKCLGCTCLSQRGYEADDVMATLATWGRSIGLSVVLVSEDKDMLQLVRERVHVMAPRRCVTCSTNHFEVAA 229          
BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A2E9QWV8_9DELT (53EXOc domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E9QWV8_9DELT)

HSP 1 Score: 176 bits (446), Expect = 1.930e-47
Identity = 111/301 (36.88%), Postives = 163/301 (54.15%), Query Frame = 0
Query:  198 DESIYIL-DGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVH-VMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPLDGVEDINSSFFLYRGVSRQAEGVMKVLGFTAPLRMIQE 496
            D S + L DGTSMLFR++YG  +  +L+ DG  EVG V  +G      +    P   A+ FD G+  TFR EI+  YKA+R   P D+  Q  L + +  +LG R   + G+EADD++ATLT  AR  G G  + S DKD+CQLV D+   V++  +          V  + GV+PS   D   LVGD  DNIPG+KG+G K    LL+ F +++ I+A +  V  ++ RG+K L + L     +E+  + R++ TL  +VP+D      +    + G    A+G    LGF  PL  ++E
Sbjct:    6 DRSFFTLYDGTSMLFRSYYGMRS--FLSPDG-VEVGGVFGVGQTLVSMMRRQRPHNCAVVFDAGQ-RTFRNEIYELYKANRGEPPEDLIPQFDLVQEMIRSLGFRCYCVPGYEADDLIATLTSLARKSGFGTRIVSVDKDICQLVTDQQPPVVIYHAKKRLFYNEAGVFERMGVKPSQAIDYQALVGDSTDNIPGIKGVGPKAAQALLDSFENIDAIYADIDRVQTLSFRGAKSLAKKLEAG--REQVAIARQLVTLKHDVPIDTTIASFADETRWEGPMLNADGFFDQLGFHRPLYQLRE 300          
BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A2D5BSF5_9BACT (Exodeoxyribonuclease IX n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5BSF5_9BACT)

HSP 1 Score: 172 bits (435), Expect = 4.800e-46
Identity = 114/291 (39.18%), Postives = 161/291 (55.33%), Query Frame = 0
Query:  201 IYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPLDGVEDINSSFFLYRGVSRQAEGVMKVLGFTAPL 491
            +++LDGT+ LFRA++        A DG  EVGAV   G    + +    P ++A+ FD G   TFR EI+P YKA+R   P D+  Q  LA  L  ALG  +   +G+EADD+MATL R A   GL   + + DKD+ QLV D V V+ P+  D AI G   V+ +FGV  S L D   L GD  DN+PGVKG+G K    L+  FG ++G++  +  V  +++RG+KGL + L +   +EEA L R +  L +E P++  E         RG    A+     +GF +PL
Sbjct:    6 LHVLDGTAALFRAWFS--VNERPAPDG-VEVGAVWGFGQWLGKVVRRTRPTHLAVVFDAGM-WTFRNEIWPDYKANRGEPPDDLVPQFDLAYDLCVALGFPSFRTDGYEADDLMATLARRAVGAGLEAALVTPDKDVLQLVSDAVCVLDPKELD-AIDG-PMVKERFGVEASQLVDYLALAGDPTDNVPGVKGVGPKTAQALIAAFGSVDGLYEDLDRVATLDVRGAKGLGDKLREH--EEEARLSRRLVVLDEEAPMEP-EIRTLGDLRLRGTPDGADRFFSRVGFPSPL 287          
BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A353MEJ4_9DELT (Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422 RepID=A0A353MEJ4_9DELT)

HSP 1 Score: 175 bits (443), Expect = 3.170e-45
Identity = 102/259 (39.38%), Postives = 147/259 (56.76%), Query Frame = 0
Query:  201 IYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPLD 459
            +Y+LDG+S ++RA+YG       A  G     AVL       + + E  P Y A+ FD  R+ TFRR+I+P YKAHR+  P D+ LQ+P  + + +AL    L   GFEADDV+ATL R   + G+ V V + DKD+ Q+V DR+ ++       +  G +EV  +FGV P  + D+ GL GD ADNIPGV GIG K  + L++RFG LEG+   +  V   + R S  L          ++A L + +AT+  +VPL+
Sbjct:    7 LYLLDGSSYIYRAYYGFRES---ATSGGMPTNAVLGFTRMLLELVQEHRPEYFAVVFDPPREETFRRDIYPAYKAHREAVPEDLLLQLPYIRRILQALNVPALEAPGFEADDVIATLAREYAAAGIEVTVVTGDKDLLQIVSDRIALLDTMKGKRS--GPQEVLDRFGVAPELVADVLGLAGDSADNIPGVPGIGEKTAAMLVQRFGSLEGVLQWITLVNGKSRRESLHLHA--------DQARLSKRLATVRYDVPLE 252          
BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A7C5BBV9_9DELT (DNA polymerase I n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C5BBV9_9DELT)

HSP 1 Score: 177 bits (449), Expect = 3.450e-44
Identity = 103/263 (39.16%), Postives = 152/263 (57.79%), Query Frame = 0
Query:  197 PDESIYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPLD 459
            P + +Y++DGTS L+RAF+   A  +L+        A+        + + E  P  +A+ FD G   +FR+++F  YKAHR P P D+ LQ+P  K + EA+    L LEGFEADDV+ATLT  A+  G+ VV+ S DKD+ Q+V + V ++    N+      E+V  KFGV P  +PD  GLVGD +DNIPG++GIG K    LLER+  LE I   + H+ +  ++ S  L+E L K G     +L + +  +  +VPL+
Sbjct:    8 PFQKLYLIDGTSYLYRAFF---ALPHLSTSKGFPTNAIFGFTSMLLKLLREEKPEGLAVVFD-GPKPSFRKDLFADYKAHRPPAPQDLKLQIPYVKKILEAMRIPVLELEGFEADDVIATLTEKAKKEGISVVIVSGDKDLLQIVSEEVSLLDTMKNER--FTPEKVREKFGVSPEQIPDFLGLVGDQSDNIPGIEGIGPKTTQALLERYNSLESILENLDHIPDSLLKPS--LKEKLRKAG--NRVLLNKRLIQIRKDVPLE 260          
BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A6I1KD06_9DELT (Ribonuclease (Fragment) n=1 Tax=Geobacteraceae bacterium TaxID=2282154 RepID=A0A6I1KD06_9DELT)

HSP 1 Score: 169 bits (427), Expect = 5.390e-44
Identity = 106/259 (40.93%), Postives = 145/259 (55.98%), Query Frame = 0
Query:  201 IYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPLD 459
            +Y+LDG+S ++RA+YG      LA  G     AV          + E  P Y+A+ FD  R+ TFRREI+P YKAHR   P D+  Q+P  + + +AL    L   GFEADDV+ATL R   + G+ V V + DKD+ Q+V DR+  +L   ND    G +EV  +FGV P  + D+ GL GD ADNIPGV GIG K  ++L++RFG LEG       V     R      E LS     ++A L + +AT+  +VPL+
Sbjct:   18 LYLLDGSSYIYRAYYGIRE---LATPGGMPTNAVFGFTRMLLALLQENRPDYLAVVFDPPREETFRREIYPAYKAHRDAMPEDLVPQLPYIRKVLQALNIPVLEAAGFEADDVIATLARTYAAEGIEVTVVTGDKDLLQIVGDRIG-LLDTMNDKRS-GPQEVLDRFGVPPELVADVLGLAGDTADNIPGVPGIGEKTAAKLVKRFGSLEGALQWKSLVNGKTRR------ESLSSHA--DQARLSKRLATVRYDVPLE 263          
BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A1F9K7W9_9DELT (53EXOc domain-containing protein n=1 Tax=Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22 TaxID=1797892 RepID=A0A1F9K7W9_9DELT)

HSP 1 Score: 166 bits (420), Expect = 9.040e-44
Identity = 95/262 (36.26%), Postives = 152/262 (58.02%), Query Frame = 0
Query:  197 PDESIYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPL 458
            P   +Y++DG+S +FRAF+       L         A+L       +F+    P Y+A+A D G++T FR +I+  YK +R   P  +  Q P  + + +A+    L LEGFEADD++ATL +   + GL VV+ S DKD+ QLV ++V ++      +  +    V+ KFGV P  + ++ GL+GD  DNIPGVKGIG K  S L++R+  LE +FA +  V   +++G++ ++  L+    +EEA+L RE+AT+  +VP+
Sbjct:    4 PPPCVYLVDGSSYIFRAFFALPP---LTNSAGLPTQAILGFTTMTLKFLKTYKPEYLAVALDAGKET-FRNQIYQAYKGNRPEAPPQLIPQFPYIRKVLKAMSVVVLELEGFEADDIIATLAKDFSARGLSVVIVSGDKDLMQLVGEKVKLLDTAKEKW--IDAAAVKEKFGVAPEKVTEVMGLMGDAIDNIPGVKGIGEKTASALIQRYESLENLFAHLDDVEKSDLKGARRIRNALADR--KEEALLSRELATVRTDVPI 257          
BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A7C4BK48_9DELT (DNA polymerase I (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C4BK48_9DELT)

HSP 1 Score: 170 bits (431), Expect = 9.110e-44
Identity = 101/263 (38.40%), Postives = 150/263 (57.03%), Query Frame = 0
Query:  197 PDESIYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPLD 459
            P + +Y++DGTS L+RAF+   A   L+        A+        + + E  P  +A+ FD G   +FR+++F  YKAHR   P D+ LQ+P  K + EA+    L LEGFEADDV+ATLT  A+  G+ VV+ S DKD+ Q+V + V +     N+      E+V  KFGV P  +PD  GLVGD +DNI G++GIG K    LLER+G LE I   + H+ +  ++ S  L+E L K   +   +L + +A +  ++PL+
Sbjct:    8 PLQKLYLIDGTSYLYRAFF---ALPRLSTSKGFPTNAIFGFTSMLLKLLREEKPEGLAVVFD-GPKPSFRKDLFADYKAHRPSAPQDLKLQIPYVKKILEAMRIHILELEGFEADDVIATLTEKAKEEGISVVIVSGDKDLLQIVSEEVLLFDTMKNER--FTPEKVREKFGVSPEQIPDFLGLVGDQSDNILGIEGIGPKTAQALLERYGSLESILKNLDHIPDSLLKPS--LKEKLRKA--ENRVLLNKRLAQIRKDIPLE 260          
BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A533SDF6_9BACT (Ribonuclease H n=1 Tax=bacterium TaxID=1869227 RepID=A0A533SDF6_9BACT)

HSP 1 Score: 171 bits (432), Expect = 1.040e-43
Identity = 104/258 (40.31%), Postives = 148/258 (57.36%), Query Frame = 0
Query:  201 IYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPL 458
            +Y+LDG+S ++RAFYG      LA  G     AV          + E  P Y+A+ FD  RD TFRREI+P YKA+R   P D+  Q+P  + + EAL   TL   GFEADDV+ATL R     G+ V V + DKD+ Q+V D++  +L    D +  G +EV  +FGV P  +PD+ GL GD +DNIPGV GIG K  ++L+++FG LEG+           + G K  + L +    Q++A+L + +AT+  +V L
Sbjct:    7 LYLLDGSSYIYRAFYGVRD---LATSGGMPTNAVFGFTRMLLGLLQEHTPEYLAVVFDRPRDETFRREIYPEYKANRDAMPEDLVPQIPYIRKVLEALNIPTLEAPGFEADDVIATLARRTAEEGIRVTVVTGDKDLMQIVNDKI-CLLDTMKD-SCSGPQEVLERFGVPPERVPDVLGLSGDTSDNIPGVPGIGEKTAAKLVKQFGSLEGVLR-----WRSLVNGKKCRENLHA---YQDQALLSKTLATVRYDVDL 251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEW8_9PHAE3.000e-15280.7353EXOc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835ZC56_9STRA1.320e-6664.745'-3' exonuclease n=1 Tax=Tribonema minus TaxID=30... [more]
A0A2E9QWV8_9DELT1.930e-4736.8853EXOc domain-containing protein n=1 Tax=Deltaprot... [more]
A0A2D5BSF5_9BACT4.800e-4639.18Exodeoxyribonuclease IX n=1 Tax=Planctomycetes bac... [more]
A0A353MEJ4_9DELT3.170e-4539.38Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422... [more]
A0A7C5BBV9_9DELT3.450e-4439.16DNA polymerase I n=1 Tax=Deltaproteobacteria bacte... [more]
A0A6I1KD06_9DELT5.390e-4440.93Ribonuclease (Fragment) n=1 Tax=Geobacteraceae bac... [more]
A0A1F9K7W9_9DELT9.040e-4436.2653EXOc domain-containing protein n=1 Tax=Deltaprot... [more]
A0A7C4BK48_9DELT9.110e-4438.40DNA polymerase I (Fragment) n=1 Tax=Deltaproteobac... [more]
A0A533SDF6_9BACT1.040e-4340.31Ribonuclease H n=1 Tax=bacterium TaxID=1869227 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0024215'-3' exonuclease, N-terminalSMARTSM0047553exo3coord: 201..467
e-value: 6.9E-74
score: 261.4
IPR008918Helix-hairpin-helix motif, class 2SMARTSM00279HhH_4coord: 371..406
e-value: 6.4E-9
score: 45.6
NoneNo IPR availableGENE3D1.10.150.20coord: 372..453
e-value: 4.7E-64
score: 218.1
NoneNo IPR availableGENE3D3.40.50.1010coord: 202..459
e-value: 4.7E-64
score: 218.1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..513
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..33
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.495
IPR0200465'-3' exonuclease, alpha-helical arch, N-terminalPFAMPF027395_3_exonuc_Ncoord: 201..368
e-value: 6.5E-40
score: 136.6
IPR020045DNA polymerase I-like, H3TH domainPFAMPF013675_3_exonuccoord: 369..463
e-value: 7.3E-18
score: 65.0
IPR038969Flap endonucleasePANTHERPTHR42646FAMILY NOT NAMEDcoord: 199..461
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 200..354
IPR0362795'-3' exonuclease, C-terminal domain superfamilySUPERFAMILY478075' to 3' exonuclease, C-terminal subdomaincoord: 369..461

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5342contigH-paniculata_contig5342:4524..11236 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5342.12758.1mRNA_H-paniculata_contig5342.12758.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5342 4499..12187 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5342.12758.1 ID=prot_H-paniculata_contig5342.12758.1|Name=mRNA_H-paniculata_contig5342.12758.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=514bp
MPPLHCRRRIVMTATAVAAATALSIGTSSSSFTARRFSSFVGPPSCVTFG
RSNCGGDSFASLYGSGSASSTAAGTGAADARPKRQRSRRRSRPAWGRLDY
QIQMLCSRGESNSRISRELGMNRLVYQLAGTASGSRAEDGDADAEALPDA
DVIGAGPITPVSTTLKGNTAVDTKRSTAVAGTRTSAQSPPLTHEQLPDES
IYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNP
RYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGC
RTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLP
RSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGS
RLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIA
TLHDEVPLDGVEDINSSFFLYRGVSRQAEGVMKVLGFTAPLRMIQEGKST
QSPIAEESSQLVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0024215-3_exonuclease_N
IPR008918HhH2
IPR0200465-3_exonucl_a-hlix_arch_N
IPR020045DNA_polI_H3TH
IPR038969FEN_bact-like
IPR029060PIN-like_dom_sf
IPR0362795-3_exonuclease_C_sf