mRNA_H-paniculata_contig5342.12758.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5342.12758.1
Unique NamemRNA_H-paniculata_contig5342.12758.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A6H5JEW8_9PHAE (53EXOc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW8_9PHAE)

HSP 1 Score: 444 bits (1143), Expect = 8.110e-148
Identity = 222/275 (80.73%), Postives = 248/275 (90.18%), Query Frame = 2 
Query:  581 AQSPPLTHEQLPDESIYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPLDG 1405
            A  PPLTH+QLP+ESIY+LDGTSMLFRAFYGRGAGGYLA++GATEVGAVLAMGIEFAQFINEV PRYVAMAFDVGR+TTFRR+++P YKA RKP P+D+TLQ+PLAKAL+EALGCRT  +EG+EADDVMATL RW RSVGLGVVVCSSDKDMCQLVRDRVHVM PR + Y ILG +EV AKFGV+PS+LPDLFGL+GDVADNIPGVKGIG KGGSRLLE+F  LEG+FAG+  VG+M IRGSKGLQ LLS+PGIQEEAMLYREIATL DE  + G
Sbjct:    2 ADPPPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSDEVLAKFGVQPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMGIRGSKGLQTLLSQPGIQEEAMLYREIATLDDEGSVSG 276
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BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A835ZC56_9STRA (5'-3' exonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC56_9STRA)

HSP 1 Score: 224 bits (570), Expect = 5.420e-64
Identity = 112/173 (64.74%), Postives = 133/173 (76.88%), Query Frame = 2 
Query:  602 HEQLPDESIYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEA 1120
            H  +PDE++++LDGTSMLFRA +G+G+  YLAADGATEV AVLAMGIE AQFI EV PRY+A+AFDV R++TFRR++ P YKAHR PHP D+ LQ+PLA AL + LGC  LS  G+EADDVMATL  W RS+GL VV+ S DKDM QLVR+RVHVM PR        H EV A
Sbjct:   57 HTDVPDETLWVLDGTSMLFRAHFGKGSQSYLAADGATEVAAVLAMGIELAQFIEEVQPRYLAVAFDVDRNSTFRRQLMPTYKAHRPPHPRDLLLQLPLATALTKCLGCTCLSQRGYEADDVMATLATWGRSIGLSVVLVSEDKDMLQLVRERVHVMAPRRCVTCSTNHFEVAA 229
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BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A2E9QWV8_9DELT (53EXOc domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E9QWV8_9DELT)

HSP 1 Score: 176 bits (446), Expect = 1.050e-45
Identity = 111/301 (36.88%), Postives = 163/301 (54.15%), Query Frame = 2 
Query:  617 DESIYIL-DGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVH-VMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPLDGVEDINSSFFLYRGVSRQAEGVMKVLGFTAPLRMIQE 1513
            D S + L DGTSMLFR++YG  +  +L+ DG  EVG V  +G      +    P   A+ FD G+  TFR EI+  YKA+R   P D+  Q  L + +  +LG R   + G+EADD++ATLT  AR  G G  + S DKD+CQLV D+   V++  +          V  + GV+PS   D   LVGD  DNIPG+KG+G K    LL+ F +++ I+A +  V  ++ RG+K L + L     +E+  + R++ TL  +VP+D      +    + G    A+G    LGF  PL  ++E
Sbjct:    6 DRSFFTLYDGTSMLFRSYYGMRS--FLSPDG-VEVGGVFGVGQTLVSMMRRQRPHNCAVVFDAGQ-RTFRNEIYELYKANRGEPPEDLIPQFDLVQEMIRSLGFRCYCVPGYEADDLIATLTSLARKSGFGTRIVSVDKDICQLVTDQQPPVVIYHAKKRLFYNEAGVFERMGVKPSQAIDYQALVGDSTDNIPGIKGVGPKAAQALLDSFENIDAIYADIDRVQTLSFRGAKSLAKKLEAG--REQVAIARQLVTLKHDVPIDTTIASFADETRWEGPMLNADGFFDQLGFHRPLYQLRE 300
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BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A2D5BSF5_9BACT (Exodeoxyribonuclease IX n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5BSF5_9BACT)

HSP 1 Score: 172 bits (435), Expect = 2.110e-44
Identity = 114/291 (39.18%), Postives = 161/291 (55.33%), Query Frame = 2 
Query:  626 IYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPLDGVEDINSSFFLYRGVSRQAEGVMKVLGFTAPL 1498
            +++LDGT+ LFRA++        A DG  EVGAV   G    + +    P ++A+ FD G   TFR EI+P YKA+R   P D+  Q  LA  L  ALG  +   +G+EADD+MATL R A   GL   + + DKD+ QLV D V V+ P+  D AI G   V+ +FGV  S L D   L GD  DN+PGVKG+G K    L+  FG ++G++  +  V  +++RG+KGL + L +   +EEA L R +  L +E P++  E         RG    A+     +GF +PL
Sbjct:    6 LHVLDGTAALFRAWFS--VNERPAPDG-VEVGAVWGFGQWLGKVVRRTRPTHLAVVFDAGM-WTFRNEIWPDYKANRGEPPDDLVPQFDLAYDLCVALGFPSFRTDGYEADDLMATLARRAVGAGLEAALVTPDKDVLQLVSDAVCVLDPKELD-AIDG-PMVKERFGVEASQLVDYLALAGDPTDNVPGVKGVGPKTAQALIAAFGSVDGLYEDLDRVATLDVRGAKGLGDKLREH--EEEARLSRRLVVLDEEAPMEP-EIRTLGDLRLRGTPDGADRFFSRVGFPSPL 287
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BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A353MEJ4_9DELT (Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422 RepID=A0A353MEJ4_9DELT)

HSP 1 Score: 175 bits (443), Expect = 1.680e-43
Identity = 102/259 (39.38%), Postives = 147/259 (56.76%), Query Frame = 2 
Query:  626 IYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPLD 1402
            +Y+LDG+S ++RA+YG       A  G     AVL       + + E  P Y A+ FD  R+ TFRR+I+P YKAHR+  P D+ LQ+P  + + +AL    L   GFEADDV+ATL R   + G+ V V + DKD+ Q+V DR+ ++       +  G +EV  +FGV P  + D+ GL GD ADNIPGV GIG K  + L++RFG LEG+   +  V   + R S  L          ++A L + +AT+  +VPL+
Sbjct:    7 LYLLDGSSYIYRAYYGFRES---ATSGGMPTNAVLGFTRMLLELVQEHRPEYFAVVFDPPREETFRRDIYPAYKAHREAVPEDLLLQLPYIRRILQALNVPALEAPGFEADDVIATLAREYAAAGIEVTVVTGDKDLLQIVSDRIALLDTMKGKRS--GPQEVLDRFGVAPELVADVLGLAGDSADNIPGVPGIGEKTAAMLVQRFGSLEGVLQWITLVNGKSRRESLHLHA--------DQARLSKRLATVRYDVPLE 252
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BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A6I1KD06_9DELT (Ribonuclease (Fragment) n=1 Tax=Geobacteraceae bacterium TaxID=2282154 RepID=A0A6I1KD06_9DELT)

HSP 1 Score: 169 bits (427), Expect = 2.060e-42
Identity = 106/259 (40.93%), Postives = 145/259 (55.98%), Query Frame = 2 
Query:  626 IYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPLD 1402
            +Y+LDG+S ++RA+YG      LA  G     AV          + E  P Y+A+ FD  R+ TFRREI+P YKAHR   P D+  Q+P  + + +AL    L   GFEADDV+ATL R   + G+ V V + DKD+ Q+V DR+  +L   ND    G +EV  +FGV P  + D+ GL GD ADNIPGV GIG K  ++L++RFG LEG       V     R      E LS     ++A L + +AT+  +VPL+
Sbjct:   18 LYLLDGSSYIYRAYYGIRE---LATPGGMPTNAVFGFTRMLLALLQENRPDYLAVVFDPPREETFRREIYPAYKAHRDAMPEDLVPQLPYIRKVLQALNIPVLEAAGFEADDVIATLARTYAAEGIEVTVVTGDKDLLQIVGDRIG-LLDTMNDKRS-GPQEVLDRFGVPPELVADVLGLAGDTADNIPGVPGIGEKTAAKLVKRFGSLEGALQWKSLVNGKTRR------ESLSSHA--DQARLSKRLATVRYDVPLE 263
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BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A7C5BBV9_9DELT (DNA polymerase I n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C5BBV9_9DELT)

HSP 1 Score: 177 bits (449), Expect = 2.430e-42
Identity = 103/263 (39.16%), Postives = 152/263 (57.79%), Query Frame = 2 
Query:  614 PDESIYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPLD 1402
            P + +Y++DGTS L+RAF+   A  +L+        A+        + + E  P  +A+ FD G   +FR+++F  YKAHR P P D+ LQ+P  K + EA+    L LEGFEADDV+ATLT  A+  G+ VV+ S DKD+ Q+V + V ++    N+      E+V  KFGV P  +PD  GLVGD +DNIPG++GIG K    LLER+  LE I   + H+ +  ++ S  L+E L K G     +L + +  +  +VPL+
Sbjct:    8 PFQKLYLIDGTSYLYRAFF---ALPHLSTSKGFPTNAIFGFTSMLLKLLREEKPEGLAVVFD-GPKPSFRKDLFADYKAHRPPAPQDLKLQIPYVKKILEAMRIPVLELEGFEADDVIATLTEKAKKEGISVVIVSGDKDLLQIVSEEVSLLDTMKNER--FTPEKVREKFGVSPEQIPDFLGLVGDQSDNIPGIEGIGPKTTQALLERYNSLESILENLDHIPDSLLKPS--LKEKLRKAG--NRVLLNKRLIQIRKDVPLE 260
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BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A1F9K7W9_9DELT (53EXOc domain-containing protein n=1 Tax=Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22 TaxID=1797892 RepID=A0A1F9K7W9_9DELT)

HSP 1 Score: 166 bits (420), Expect = 2.980e-42
Identity = 95/262 (36.26%), Postives = 152/262 (58.02%), Query Frame = 2 
Query:  614 PDESIYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPL 1399
            P   +Y++DG+S +FRAF+       L         A+L       +F+    P Y+A+A D G++T FR +I+  YK +R   P  +  Q P  + + +A+    L LEGFEADD++ATL +   + GL VV+ S DKD+ QLV ++V ++      +  +    V+ KFGV P  + ++ GL+GD  DNIPGVKGIG K  S L++R+  LE +FA +  V   +++G++ ++  L+    +EEA+L RE+AT+  +VP+
Sbjct:    4 PPPCVYLVDGSSYIFRAFFALPP---LTNSAGLPTQAILGFTTMTLKFLKTYKPEYLAVALDAGKET-FRNQIYQAYKGNRPEAPPQLIPQFPYIRKVLKAMSVVVLELEGFEADDIIATLAKDFSARGLSVVIVSGDKDLMQLVGEKVKLLDTAKEKW--IDAAAVKEKFGVAPEKVTEVMGLMGDAIDNIPGVKGIGEKTASALIQRYESLENLFAHLDDVEKSDLKGARRIRNALADR--KEEALLSRELATVRTDVPI 257
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BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A7C4BK48_9DELT (DNA polymerase I (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C4BK48_9DELT)

HSP 1 Score: 170 bits (431), Expect = 3.840e-42
Identity = 101/263 (38.40%), Postives = 150/263 (57.03%), Query Frame = 2 
Query:  614 PDESIYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPLD 1402
            P + +Y++DGTS L+RAF+   A   L+        A+        + + E  P  +A+ FD G   +FR+++F  YKAHR   P D+ LQ+P  K + EA+    L LEGFEADDV+ATLT  A+  G+ VV+ S DKD+ Q+V + V +     N+      E+V  KFGV P  +PD  GLVGD +DNI G++GIG K    LLER+G LE I   + H+ +  ++ S  L+E L K   +   +L + +A +  ++PL+
Sbjct:    8 PLQKLYLIDGTSYLYRAFF---ALPRLSTSKGFPTNAIFGFTSMLLKLLREEKPEGLAVVFD-GPKPSFRKDLFADYKAHRPSAPQDLKLQIPYVKKILEAMRIHILELEGFEADDVIATLTEKAKEEGISVVIVSGDKDLLQIVSEEVLLFDTMKNER--FTPEKVREKFGVSPEQIPDFLGLVGDQSDNILGIEGIGPKTAQALLERYGSLESILKNLDHIPDSLLKPS--LKEKLRKA--ENRVLLNKRLAQIRKDIPLE 260
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BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Match: A0A533SDF6_9BACT (Ribonuclease H n=1 Tax=bacterium TaxID=1869227 RepID=A0A533SDF6_9BACT)

HSP 1 Score: 171 bits (432), Expect = 4.500e-42
Identity = 104/258 (40.31%), Postives = 148/258 (57.36%), Query Frame = 2 
Query:  626 IYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNPRYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGCRTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLPRSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGSRLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIATLHDEVPL 1399
            +Y+LDG+S ++RAFYG      LA  G     AV          + E  P Y+A+ FD  RD TFRREI+P YKA+R   P D+  Q+P  + + EAL   TL   GFEADDV+ATL R     G+ V V + DKD+ Q+V D++  +L    D +  G +EV  +FGV P  +PD+ GL GD +DNIPGV GIG K  ++L+++FG LEG+           + G K  + L +    Q++A+L + +AT+  +V L
Sbjct:    7 LYLLDGSSYIYRAFYGVRD---LATSGGMPTNAVFGFTRMLLGLLQEHTPEYLAVVFDRPRDETFRREIYPEYKANRDAMPEDLVPQIPYIRKVLEALNIPTLEAPGFEADDVIATLARRTAEEGIRVTVVTGDKDLMQIVNDKI-CLLDTMKD-SCSGPQEVLERFGVPPERVPDVLGLSGDTSDNIPGVPGIGEKTAAKLVKQFGSLEGVLR-----WRSLVNGKKCRENLHA---YQDQALLSKTLATVRYDVDL 251
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5342.12758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEW8_9PHAE8.110e-14880.7353EXOc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835ZC56_9STRA5.420e-6464.745'-3' exonuclease n=1 Tax=Tribonema minus TaxID=30... [more]
A0A2E9QWV8_9DELT1.050e-4536.8853EXOc domain-containing protein n=1 Tax=Deltaprot... [more]
A0A2D5BSF5_9BACT2.110e-4439.18Exodeoxyribonuclease IX n=1 Tax=Planctomycetes bac... [more]
A0A353MEJ4_9DELT1.680e-4339.38Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422... [more]
A0A6I1KD06_9DELT2.060e-4240.93Ribonuclease (Fragment) n=1 Tax=Geobacteraceae bac... [more]
A0A7C5BBV9_9DELT2.430e-4239.16DNA polymerase I n=1 Tax=Deltaproteobacteria bacte... [more]
A0A1F9K7W9_9DELT2.980e-4236.2653EXOc domain-containing protein n=1 Tax=Deltaprot... [more]
A0A7C4BK48_9DELT3.840e-4238.40DNA polymerase I (Fragment) n=1 Tax=Deltaproteobac... [more]
A0A533SDF6_9BACT4.500e-4240.31Ribonuclease H n=1 Tax=bacterium TaxID=1869227 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5342contigH-paniculata_contig5342:4499..12187 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score173.3
Seed ortholog evalue2.9e-40
Seed eggNOG ortholog338966.Ppro_0949
Preferred namepolA
KEGG rclassRC02795
KEGG koko:K02335,ko:K03469
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576
EggNOG free text desc.RNA-DNA hybrid ribonuclease activity
EggNOG OGsCOG0258@1,COG0258@2,COG0328@1,COG0328@2
EC2.7.7.7,3.1.26.4
COG Functional cat.L
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Exons10
Model size2518
Cds size1542
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5342.12758.1prot_H-paniculata_contig5342.12758.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5342 4524..11236 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930543.6645975-UTR-H-paniculata_contig5342:4498..45231622930543.6645975-UTR-H-paniculata_contig5342:4498..4523Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5342 4499..4523 +
1691481341.149812-UTR-H-paniculata_contig5342:4498..45231691481341.149812-UTR-H-paniculata_contig5342:4498..4523Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5342 4499..4523 +
1622930543.895848-UTR-H-paniculata_contig5342:11236..121871622930543.895848-UTR-H-paniculata_contig5342:11236..12187Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5342 11237..12187 +
1691481341.2842405-UTR-H-paniculata_contig5342:11236..121871691481341.2842405-UTR-H-paniculata_contig5342:11236..12187Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5342 11237..12187 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930543.684164-CDS-H-paniculata_contig5342:4523..47321622930543.684164-CDS-H-paniculata_contig5342:4523..4732Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 4524..4732 +
1691481341.1614347-CDS-H-paniculata_contig5342:4523..47321691481341.1614347-CDS-H-paniculata_contig5342:4523..4732Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 4524..4732 +
1622930543.7026553-CDS-H-paniculata_contig5342:5039..51801622930543.7026553-CDS-H-paniculata_contig5342:5039..5180Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 5040..5180 +
1691481341.1803796-CDS-H-paniculata_contig5342:5039..51801691481341.1803796-CDS-H-paniculata_contig5342:5039..5180Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 5040..5180 +
1622930543.7212863-CDS-H-paniculata_contig5342:6124..64361622930543.7212863-CDS-H-paniculata_contig5342:6124..6436Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 6125..6436 +
1691481341.1912231-CDS-H-paniculata_contig5342:6124..64361691481341.1912231-CDS-H-paniculata_contig5342:6124..6436Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 6125..6436 +
1622930543.7425592-CDS-H-paniculata_contig5342:7337..74161622930543.7425592-CDS-H-paniculata_contig5342:7337..7416Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 7338..7416 +
1691481341.1998868-CDS-H-paniculata_contig5342:7337..74161691481341.1998868-CDS-H-paniculata_contig5342:7337..7416Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 7338..7416 +
1622930543.7634912-CDS-H-paniculata_contig5342:7936..80561622930543.7634912-CDS-H-paniculata_contig5342:7936..8056Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 7937..8056 +
1691481341.2114012-CDS-H-paniculata_contig5342:7936..80561691481341.2114012-CDS-H-paniculata_contig5342:7936..8056Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 7937..8056 +
1622930543.7801747-CDS-H-paniculata_contig5342:8925..91191622930543.7801747-CDS-H-paniculata_contig5342:8925..9119Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 8926..9119 +
1691481341.2197883-CDS-H-paniculata_contig5342:8925..91191691481341.2197883-CDS-H-paniculata_contig5342:8925..9119Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 8926..9119 +
1622930543.7958014-CDS-H-paniculata_contig5342:9689..98021622930543.7958014-CDS-H-paniculata_contig5342:9689..9802Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 9690..9802 +
1691481341.2285235-CDS-H-paniculata_contig5342:9689..98021691481341.2285235-CDS-H-paniculata_contig5342:9689..9802Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 9690..9802 +
1622930543.813632-CDS-H-paniculata_contig5342:10058..101941622930543.813632-CDS-H-paniculata_contig5342:10058..10194Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 10059..10194 +
1691481341.2449057-CDS-H-paniculata_contig5342:10058..101941691481341.2449057-CDS-H-paniculata_contig5342:10058..10194Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 10059..10194 +
1622930543.8296502-CDS-H-paniculata_contig5342:10656..107171622930543.8296502-CDS-H-paniculata_contig5342:10656..10717Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 10657..10717 +
1691481341.2595005-CDS-H-paniculata_contig5342:10656..107171691481341.2595005-CDS-H-paniculata_contig5342:10656..10717Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 10657..10717 +
1622930543.8770647-CDS-H-paniculata_contig5342:11059..112361622930543.8770647-CDS-H-paniculata_contig5342:11059..11236Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 11060..11236 +
1691481341.2742145-CDS-H-paniculata_contig5342:11059..112361691481341.2742145-CDS-H-paniculata_contig5342:11059..11236Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5342 11060..11236 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5342.12758.1

>prot_H-paniculata_contig5342.12758.1 ID=prot_H-paniculata_contig5342.12758.1|Name=mRNA_H-paniculata_contig5342.12758.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=514bp
MPPLHCRRRIVMTATAVAAATALSIGTSSSSFTARRFSSFVGPPSCVTFG
RSNCGGDSFASLYGSGSASSTAAGTGAADARPKRQRSRRRSRPAWGRLDY
QIQMLCSRGESNSRISRELGMNRLVYQLAGTASGSRAEDGDADAEALPDA
DVIGAGPITPVSTTLKGNTAVDTKRSTAVAGTRTSAQSPPLTHEQLPDES
IYILDGTSMLFRAFYGRGAGGYLAADGATEVGAVLAMGIEFAQFINEVNP
RYVAMAFDVGRDTTFRREIFPPYKAHRKPHPVDITLQMPLAKALAEALGC
RTLSLEGFEADDVMATLTRWARSVGLGVVVCSSDKDMCQLVRDRVHVMLP
RSNDYAILGHEEVEAKFGVRPSSLPDLFGLVGDVADNIPGVKGIGMKGGS
RLLERFGDLEGIFAGVKHVGNMNIRGSKGLQELLSKPGIQEEAMLYREIA
TLHDEVPLDGVEDINSSFFLYRGVSRQAEGVMKVLGFTAPLRMIQEGKST
QSPIAEESSQLVT*
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mRNA from alignment at H-paniculata_contig5342:4499..12187+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5342.12758.1 ID=mRNA_H-paniculata_contig5342.12758.1|Name=mRNA_H-paniculata_contig5342.12758.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7689bp|location=Sequence derived from alignment at H-paniculata_contig5342:4499..12187+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGCACATCTTAGAGCGGTGCTGTGGATGCCTCCCCTCCACTGCCGCCGTC
GAATTGTTATGACGGCTACTGCAGTTGCTGCTGCCACTGCCCTAAGTATC
GGAACATCGTCATCATCGTTTACAGCTAGACGATTCTCCTCGTTCGTTGG
TCCACCATCATGTGTAACCTTTGGCAGGTCAAATTGCGGTGGTGACTCCT
TTGCCTCCTTGTATGGCAGTGGGTCAGCCAGCAGGTGACTAAATGCAGCA
GAGCTTCTTTTCTGTCGTCGTTTCGGAGGTAGTTTTCAACGTAGCACGTG
ATAAAATAAAATCCTTTCGCATTTCACGCACCATATGTAAATATTGTACG
AACTATCAGTAAAACACTCGCGATATTTTGCTTCGCTGATGTCGCGTTGG
CGGTTTTTGTAGTGTAGATACTTCTATTAATAGTGTAGGTACGAACAACC
TGCATACCCTTACAGCAATTAGTCCTCTATCCTCGATGCACCCTTCTTAC
ACTGCCGCTCCGCTGGCTGTATCTTCATGAAACTGCGGCAGCACAGCAGC
GGGTACGGGTGCTGCGGACGCTCGGCCAAAACGACAGAGATCCAGAAGAC
GATCACGACCTGCGTGGGGCCGACTTGACTACCAAATCCAAATGCTCTGC
TCTCGTGGAGAGAGTAATAGCAGGATATCCCGGTGAATGCCGCAGCACAC
TAGCCCCAGAGTACCTTTACCGCTTCACGCTGACGCCTCGGTTTGTCACA
AAATACCGCTTTTTTTTTTCTTATTCCATGAAGCTAGCTTATGCCACACG
GCAAGAGTACTCGTTAATTCTTTTGAAACCAGGCCAAGTACCAGCCACAC
GAGGGATTTTCCTAACGACCAGTAGTTGACAATTATGACTACAGAATGTC
TGCGGAATGCTAATCCAGTTTGAGACAACTAGTTTTCGCGTATCTCAGAT
CATCAGGGCGGTTGTTTTTCTGCCGGTTGGAGCGTTATAATATTTGATCC
ATTGTCAAGGAAGAACGGGCTAACACCGTACTTGTTGCGAACTACCAAAT
TATAAACTAGTCCTGTCCAGTAGCTAATTAGGAAGTAGTTGGCTCCTAAA
TATTTGAGCTTGGCATCTTCCGCCTAACGAACACTGCATGTAAACGTAGC
TACGCGCTTTTCCGGCTGCTGGGTCCTTTCCCAATTTGAGGCAAAGCGCT
CTCTACGGTACCGTAGTCTGCAGAGTATATCAGCCCATGCGGTGACTTTC
GTCAAGCTTGTTTTTCTCGAGAGTCGACAAACTTGCCCTGTCTGAGGATC
ATGGTAATGGACAGATCTTGACCAGATGTTACAAACGACATAACTGGCAG
TTTCACGATCGACGTAGTTTTGAGAAAATCGACCTTGTAAACATAGTACC
CTGCATACTACACTATCCTACACACCCGGAGGAAAGGCTGTGGAGCGGCC
CCTCAACACGGACTGCCTGTCATCGATAGGGGGTCATGGTAGGCACCATC
CCCGTTTTCATGAAAAGCTGGCATTTACAATATTGGTACGCGGCATACAG
GAGCCGAAATTGTCTTGTGTGTTTGAAGGAGTGAAGCATCATTGCGCTCG
TTTTCTACATTTTTGCGTCTTCGCAGAGAACTGGGCATGAACCGCTTGGT
CTACCAGCTCGCTGGTACTGCAAGCGGTAGCAGGGCAGAGGATGGCGATG
CAGACGCTGAGGCTTTGCCGGATGCAGACGTGATTGGGGCTGGGCCAATA
ACACCTGTGTCGACCACGCTGAAGGGAAATACTGCTGTGGACACGAAAAG
GAGTACGGCGGTGGCAGGTACACGTACGTCTGCGCAATCACCTCCCCTCA
CTCATGAGCAACTCCCGGACGAAAGCATATACATTCTAGATGGCACTTCA
ATGTTGTTCAGGGCTTTCTACGGGCGTGGCGCTGGCGGGTGAGAGGACAT
AAAATTTTTTCGTTAGCGCTGATGAAACGCTCGTCTACCTGTGTGCCAGA
GATGATGGTCTGGGAGTCGGGCATATCGACGCTCGATTTCCCTCAAAATG
GATTGATTCACCGTGTACCATTATGCATCTGGCACACAAATATGGCTGTG
GGTAAAGCGAGCTTTCCCTGGGTGGGGCTAGAGAGGGGAAAATGTCGGAG
GAAAACTGATTGTCGAGGTGATCTCAATCCCGTATTTTTCTTCTTTTATG
TACAAAACACGTGGAGGCACCGAATCAGAAAGAGGAAGACTTCGTATTAA
AATTCAACACGGCTCGATAAATTCAGGGGTAGAAAATGTCTGTGTACAGG
GCGTGACGTTTGGTGTTGGGGTCAAATATGGATTCGGAAGTTGCAAACGT
CGGTAGGTTGCCGGTTGGCCGTTGATGTGGTTAGAACGCTGCGCGAAGCC
GACGAGTTTTTCTTGTTCTGAATTTCTCGGATGGCTGGTGTAGATGTTCA
ACGCGGGATGAATCATTTTGGGAACAGGGGCTGTGCAGCCTGAAAAAGCC
CACCGTAAAACATAATTATTCAGCTGGCTGGTTTGTTGGCTGTGGAGTAC
AAACGGCTCGTGGTTCCTGTGACTGCTACTTTGTTTTATCGAGCTTTCGA
ATGATCTCTTGTTAGCGATGGAGTACCGTGTTTGTAGTTCCGTACGAGGA
CCAATATCCGCCAGTAGATTTCAGGCTCATATGGTATGTGCTTTCAACAA
GCCAGTTATATTCGTATCCCAAGGCATTCGTAAAGCATCAACCCTTCCTG
CATTTCTGAATGCATAGATAGAACCATGATATACACGCGGCATGGTGTGA
CGAGGAGTCCGATCCTTGTGGTGGTTGTGCTTGGTTTAGGTACTTGGCTG
CTGACGGAGCTACCGAAGTAGGAGCGGTGCTCGCCATGGGCATTGAATTC
GCGCAGTTCATCAATGAGGTGTGACGGGGGAGTGCCTACTACTACTTTTA
TACTTGCATTCCTTGACCTTTAGATCATTAGCCACATCTTGGAGAGGATG
AAGCAAAATGGTTGACTTGTTGAGATACAGTAGGCAGGCGTGTATTTGCA
TAAGGTGACATAGTACCGAGCCAATGTGGGCCCTCACTACCTACATGTAC
ATTCTTCTGTGACAGTCCCCGTACTGATGCCTTGCAGATGGAAAATAGAA
GTAAACATTACGTACGCAGCGTAACGCCTTTTTATTGGGGTATTTTACGT
GAAGCTACCCACTGTATGGGGCTTCCATGTCGGTAGGTGCGTCTTTCTTC
CATGCCCCCAACCTCGGGTGCCTTTCAGATAGACCCACAGGCAGATCGAG
TGCTCCCCACGCGAAAAATGCTGCGTGAAATTCGACGATTCACGTGTTGA
GTATATTTATCTTGACATCGTACCCCTGTCCTCCCCATCTCCGTTTTTCT
TGCTGCGCTGAATGTGTGTCGACTCTCGGTGTTGACAGGTGAACCCACGA
TACGTTGCAATGGCTTTTGATGTCGGCCGTGACACCACGTTCCGACGAGA
GATTTTCCCGCCGTACAAGGCGCACAGGAAACCCCATCCGGTTGATATTA
CACTGCAGGTGATCACCTGCAGAATAAAAAAAAAACTCTCCAAGCGTGCG
AAAACTGCAGCCGCAGTTGGATGGTTAGAGAGACTCGATATGGCGCATTG
AGACTGTCGCTGGGATACATTCAGTCCAGGTCTTTTTTATGTATAGGAGA
GACGGTGGGCTGTCAGTGCTGCCAAAAAATTGAACCCAATATCTGTGCAT
AGTAATTTCGAGCTCGATGCATGCGGAGTCCCTCCAGGCAGGGGCGGGCT
AGCAGGAGTAGTCGAGGTCCATCTCGGATCACTCGGTATGTTGACTGCGG
CAAGGTAAAATAATCCCCCTGTACTTCGCCTATATGCCTATATATATAGA
GAGATATTACGCCCCTGAACTGCTGCCTATACATCTTTGCCGACGACGCC
GACGGCAACAGCATGTCGCTTAATTTTGGATGAGTTGAGGATTTTGAAAA
CTTTCAACCCCCGGACAAATACGAAAACTTGGTGTCGTCGCTACGAAGAT
AAGAAAGTGCTCGCCTGAGATTAAGAACAAGTAGATACGTGAAATTAACG
AGCTCACTCTGAAACTCATGCGAAAACTTCTTAATTTTCGTGGCGAATAC
GTCATCGTATTTGTCGGGAGGGGGGGGGAGGGGGGGGGGGGGGGAAAAAT
TTGTACAAGGCTTCTGCTTCACGGTCAACTACTTGGCGTGCAGCCAGTGG
TTTTGCGCTTCTTTTTCTACTACTTTTTGTTGTATATAGGCCAACGCGAA
TTAACAACGTATGTTACATTATACTTGCCCGCTCAACACTCTGTTGTTGA
TGAGGGCCCTGCTCCCTCCTTCCTCCCCCTGCTTCGACTTTATTTCGTGT
TTTGACGACCTTTGGGTTTATTGTCAGATGCCACTAGCGAAGGCTCTGGC
AGAAGCTCTCGGATGTCGGACGCTTTCACTCGAAGGGTTTGAGGCTGACG
ATGTAATGGCTACGCTAACGCGTTGGGCGAGATCTGTGGGCTTGGGGGTG
GTCGTTTGTTCATCCGACAAGGACATGTGTCAGCTCGTTAGGGATAGGGT
ACACGTCATGCTTCCTAGGAGGCAAGTGGGCAATGATGACAACAGTTACA
AGAAACGCTACGGTCGGACTCGAGGCATCGTTCATCATTGCAAGCTCACT
GTAGAGTATCGTTTTTCGGCTCATTAAAATCAAATGTTTTCACTCATCGT
GTCTCACCTTCTCTTGGTTTCAATCCTGGCCTCTTCGTTGGAGCTATTGG
CCTGCATATGCGCCGTAAGAGCGCTTTTACGTGGTGATGCACTTGTTTTC
AACGTCGGTATTCCAAACCACGAGTTCTCGCGGCAAGTGGCACATTTTCG
CATTGGGTATATTCCTATGACCTGTATGTAGTTGAGTTTCTCCCATACTG
CTGGATTTTAAAAAGCCGCAACACGGGGGGGTGCTTATTAACCACGTATA
AAGGATTGTAATTTTGTGTGCTGTGTCAACTTGCTGTACAGCCCAAGTTA
TTCCGAGCCCGACCCAGCATGCTCAATAGCATTTGCTTCGCATTTCTTGC
TTCATAATGAAACCCGAAGGGTGACGGCATGTCCATGGCATGATCAATTG
ATAACTTCGTCCTTCGATCCGTTTTGTGTATGTTTCTACAGCAATGACTA
TGCAATCCTAGGGCACGAGGAGGTCGAGGCCAAGTTTGGGGTGAGGCCCA
GCTCGCTGCCCGACCTGTTTGGACTTGTTGGTGACGTTGCAGATAACATA
CCAGGTGATGAAACATCCGATCACCTGTCGTCAGCCTATTGGTCATGAGT
AGTGTGATACACTGATACTTTTTCGCTCGGATTGATGAACAGGGCACATA
TCGCGCCCCTGTCCTCCGTTCTGTGTGGATTTTCCCAAGCCGGAAGCCTC
ATATTTCCTCGGCATGACCAGTACGAAGCTCTCTCTTGCGGTGCCGCTAC
CTAGTACCCTGCCGTGAAAATGTGCGCTCACACTTATGCCTGCTCGTATT
GAGGTTCCAGGCGTAAAGGGCATTGGGATGAAGGGAGGATCGCGTCTCTT
GGAAAGATTCGGCGACCTGGAGGGGATATTCGCTGGAGTGAAACACGTGG
GAAATATGAATATACGTGGTTCGAAGGGTCTACAGGAACTTCTCAGGTAG
GAGCAGATGCTGGATTAGGGGATAAAGTACTGCTTCGCGGTTTGCGTGGG
TAAGGTGGGAGAGGAGGTTGCAGCGTCGCCTTGTCCTGTATGTTTTCTTG
TTTGCAGTAGAGTTGGATGGGTACGTTTTTTCGGTGCATGGGTAGTAGGT
ACAGCATGGTCATTCCGCTATCTATTGCTCTCAAAGCGACATTTCCTCGC
CATAGCTCGACACTCCGCATGATGCACCACTGCCACGCTCATATTTGAGA
CATGGATATGAGCACTTTGCGTTGTTACCGCAGCATTGTCCGTGAATTGA
GCCTACCGAAGAAAGTCGATCTACATTGTTGTATTGGCCGCTCCACTGTG
CTTGGGTGAAAGCACAGGTCTCCATTATTCGAGTGCAAGTTGTTCATTCT
CGTTGAAATCCACCCCCCTGTCGCCCCAAATCTCCGTGGTTTACATAAAT
GCCGGCAGCAAACCGGGGATCCAGGAGGAAGCCATGCTCTATCGCGAGAT
CGCAACGTTGCACGACGAGGTAACAGCTTGGTGTGTGCCTTTGTTCTGAT
ATAGTCATCTGGCGGTTGCACCGAACAGCATGCGTATGGCCAACTGGTTT
GCCTGATTTAGTCCGCGCCTCCGACCGTCAGTTATTTTGCCTGCTCGCCC
TGTTCAGGACGCCGAATACAGTGTTGTCTGTCCTGTTTATGGGTGCACCT
GTCAGACTCTAGCCTTTTTTTTATTAAGGCGTGATATCTGAGACCAACTC
CAGTAAGGGTTTCAACCAATCCTTGTCATGTACACCCTGCGAGTAATATC
TTGACAATGTCTCAATGGCGGTTGTGGCACCATCTCTTTTGCTTCGATCT
GAAATCCACAGGTTCCACTAGATGGCGTGGAGGATATCAACTCGTCATTT
TTTCTCTATCGAGGAGTTTCTCGTCAAGCTGAGGGCGTAATGAAAGTCCT
CGGCTTTACGGCACCGCTTAGGATGATCCAAGAAGGGAAGAGCACTCAAT
CACCAATAGCTGAGGAATCGAGCCAACTCGTTACCTAATAGAACATTTCC
TTTAAGCACTCCTCCCTTGAAGCTGGAATATCGGACAGGGTTTGAGGGGT
AAAGACGAGTGGAAAGTTGAAGTGGGCATGTGTTGGCCGCGGAGCTTCTC
ATCCTTTTGCAGAGAGAACCCACCAACCGTCTCATATAGTGAAATAGGCT
CATCTGTGGCAAGACAGAACTATAGATTGCCCTCCCAAACTAGGCTGCTT
CATGGGTCGACGGGAAGCGATAGGATCCAACTGGGAAAAGGCGGTGTCTT
TTTCATGCGCAAAGAGGAGTCAACTCTCGGTACAAATGGCGGAAGGGGAC
CCTATTTAGGACCATGTGCCAAGAGGGCGTTGAGCTAAGGGAAGCTGGAC
CAGACTTTTGGGCACAGCTAGACAGTTTTCGTCAATGGTGCGTACGAGTG
TACTGCAAGCCAGATGTTGTCGGTCGTTCCCAGCTACTTTCAGTCAGACA
TCACAGGTGCGCATGACGATTGTGTGTTAAGCGTTACGATCATTGCATAG
CTAGCCGAGGACAATCCCATTCCCCAGTGTATTCAACTCGCGGTTGTGCT
TGAGGAAGTAAATAGTGCAGGAAATTCATCGAAGGTACAATCATAAAGGA
TGGCTGTGAGCACGAAACCTGCAAGAAGTCGGGTCACCCTCTAGGAGGCT
TTCGGCTGGTCGGATTGTGCGTGGAAAAATCTCCTGCTGCCCAGAATTTC
GCGGCGACCTACGGTACATTTAATCCGTGTTTTGGTCTACCACCAGTGTG
CACCACTCTCTTTCCCTCTGCGGTGTTCTTCACCCTCTTACAGGGTGGTG
CATGCAGATCGTTGAAAGCGGGGACGTTTCATATCGCTGAGGCGGAATGA
AATGAAGTTGAGCTCCCAGAGTTCTTGGGACAATTGGCACATTGGGTTCC
CGGTAAGGGCTTCGTCTGTGTGGGTTTAGATGACGGTTA
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Coding sequence (CDS) from alignment at H-paniculata_contig5342:4499..12187+

>mRNA_H-paniculata_contig5342.12758.1 ID=mRNA_H-paniculata_contig5342.12758.1|Name=mRNA_H-paniculata_contig5342.12758.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3084bp|location=Sequence derived from alignment at H-paniculata_contig5342:4499..12187+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTCCCCTCCACTGCCGCCGTCGAATTGTTATGACGGCTACTGCAGT
TGCTGCTGCCACTGCCCTAAGTATCGGAACATCGTCATCATCGTTTACAG
CTAGACGATTCTCCTCGTTCGTTGGTCCACCATCATGTGTAACCTTTGGC
AGGTCAAATTGCGGTGGTGACTCCTTTGCCTCCTTGTATGGCAGTGGGTC
AGCCAGCAGATGCCTCCCCTCCACTGCCGCCGTCGAATTGTTATGACGGC
TACTGCAGTTGCTGCTGCCACTGCCCTAAGTATCGGAACATCGTCATCAT
CGTTTACAGCTAGACGATTCTCCTCGTTCGTTGGTCCACCATCATGTGTA
ACCTTTGGCAGGTCAAATTGCGGTGGTGACTCCTTTGCCTCCTTGTATGG
CAGTGGGTCAGCCAGCAGCACAGCAGCGGGTACGGGTGCTGCGGACGCTC
GGCCAAAACGACAGAGATCCAGAAGACGATCACGACCTGCGTGGGGCCGA
CTTGACTACCAAATCCAAATGCTCTGCTCTCGTGGAGAGAGTAATAGCAG
GATATCCCGCACAGCAGCGGGTACGGGTGCTGCGGACGCTCGGCCAAAAC
GACAGAGATCCAGAAGACGATCACGACCTGCGTGGGGCCGACTTGACTAC
CAAATCCAAATGCTCTGCTCTCGTGGAGAGAGTAATAGCAGGATATCCCG
AGAACTGGGCATGAACCGCTTGGTCTACCAGCTCGCTGGTACTGCAAGCG
GTAGCAGGGCAGAGGATGGCGATGCAGACGCTGAGGCTTTGCCGGATGCA
GACGTGATTGGGGCTGGGCCAATAACACCTGTGTCGACCACGCTGAAGGG
AAATACTGCTGTGGACACGAAAAGGAGTACGGCGGTGGCAGGTACACGTA
CGTCTGCGCAATCACCTCCCCTCACTCATGAGCAACTCCCGGACGAAAGC
ATATACATTCTAGATGGCACTTCAATGTTGTTCAGGGCTTTCTACGGGCG
TGGCGCTGGCGGAGAACTGGGCATGAACCGCTTGGTCTACCAGCTCGCTG
GTACTGCAAGCGGTAGCAGGGCAGAGGATGGCGATGCAGACGCTGAGGCT
TTGCCGGATGCAGACGTGATTGGGGCTGGGCCAATAACACCTGTGTCGAC
CACGCTGAAGGGAAATACTGCTGTGGACACGAAAAGGAGTACGGCGGTGG
CAGGTACACGTACGTCTGCGCAATCACCTCCCCTCACTCATGAGCAACTC
CCGGACGAAAGCATATACATTCTAGATGGCACTTCAATGTTGTTCAGGGC
TTTCTACGGGCGTGGCGCTGGCGGGTACTTGGCTGCTGACGGAGCTACCG
AAGTAGGAGCGGTGCTCGCCATGGGCATTGAATTCGCGCAGTTCATCAAT
GAGGTACTTGGCTGCTGACGGAGCTACCGAAGTAGGAGCGGTGCTCGCCA
TGGGCATTGAATTCGCGCAGTTCATCAATGAGGTGAACCCACGATACGTT
GCAATGGCTTTTGATGTCGGCCGTGACACCACGTTCCGACGAGAGATTTT
CCCGCCGTACAAGGCGCACAGGAAACCCCATCCGGTTGATATTACACTGC
AGGTGAACCCACGATACGTTGCAATGGCTTTTGATGTCGGCCGTGACACC
ACGTTCCGACGAGAGATTTTCCCGCCGTACAAGGCGCACAGGAAACCCCA
TCCGGTTGATATTACACTGCAGATGCCACTAGCGAAGGCTCTGGCAGAAG
CTCTCGGATGTCGGACGCTTTCACTCGAAGGGTTTGAGGCTGACGATGTA
ATGGCTACGCTAACGCGTTGGGCGAGATCTGTGGGCTTGGGGGTGGTCGT
TTGTTCATCCGACAAGGACATGTGTCAGCTCGTTAGGGATAGGGTACACG
TCATGCTTCCTAGGAGATGCCACTAGCGAAGGCTCTGGCAGAAGCTCTCG
GATGTCGGACGCTTTCACTCGAAGGGTTTGAGGCTGACGATGTAATGGCT
ACGCTAACGCGTTGGGCGAGATCTGTGGGCTTGGGGGTGGTCGTTTGTTC
ATCCGACAAGGACATGTGTCAGCTCGTTAGGGATAGGGTACACGTCATGC
TTCCTAGGAGCAATGACTATGCAATCCTAGGGCACGAGGAGGTCGAGGCC
AAGTTTGGGGTGAGGCCCAGCTCGCTGCCCGACCTGTTTGGACTTGTTGG
TGACGTTGCAGATAACATACCAGCAATGACTATGCAATCCTAGGGCACGA
GGAGGTCGAGGCCAAGTTTGGGGTGAGGCCCAGCTCGCTGCCCGACCTGT
TTGGACTTGTTGGTGACGTTGCAGATAACATACCAGGCGTAAAGGGCATT
GGGATGAAGGGAGGATCGCGTCTCTTGGAAAGATTCGGCGACCTGGAGGG
GATATTCGCTGGAGTGAAACACGTGGGAAATATGAATATACGTGGTTCGA
AGGGTCTACAGGAACTTCTCAGGCGTAAAGGGCATTGGGATGAAGGGAGG
ATCGCGTCTCTTGGAAAGATTCGGCGACCTGGAGGGGATATTCGCTGGAG
TGAAACACGTGGGAAATATGAATATACGTGGTTCGAAGGGTCTACAGGAA
CTTCTCAGCAAACCGGGGATCCAGGAGGAAGCCATGCTCTATCGCGAGAT
CGCAACGTTGCACGACGAGCAAACCGGGGATCCAGGAGGAAGCCATGCTC
TATCGCGAGATCGCAACGTTGCACGACGAGGTTCCACTAGATGGCGTGGA
GGATATCAACTCGTCATTTTTTCTCTATCGAGGAGTTTCTCGTCAAGCTG
AGGGCGTAATGAAAGTCCTCGGCTTTACGGCACCGCTTAGGATGATCCAA
GAAGGGAAGAGCACTCAATCACCAATAGCTGAGGAATCGAGCCAACTCGT
TACCTAAGTTCCACTAGATGGCGTGGAGGATATCAACTCGTCATTTTTTC
TCTATCGAGGAGTTTCTCGTCAAGCTGAGGGCGTAATGAAAGTCCTCGGC
TTTACGGCACCGCTTAGGATGATCCAAGAAGGGAAGAGCACTCAATCACC
AATAGCTGAGGAATCGAGCCAACTCGTTACCTAA
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