prot_H-paniculata_contig5340.12754.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5340.12754.1
Unique Nameprot_H-paniculata_contig5340.12754.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length151
Homology
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BLAST of mRNA_H-paniculata_contig5340.12754.1 vs. uniprot
Match: D7FLL3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL3_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 4.900e-9
Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 0 
Query:   64 AATMVCAVVAFNTSFKKYRWGKLIWRRPRPRPQKRVSFSESCTVIHHLPEREDLTDDDRRALCWSPAELREFARSTLIDEWIECWGA 150
            AA   C  +AFN       +G      PR R  KRVSFS    +IH       LT+++R+ L +SPAEL++F+RS  +D W+E WG+
Sbjct:    9 AALTACTAIAFN-------FGVFF---PRRRAGKRVSFSTREDMIHD-GYGHHLTEEERKDLSYSPAELQQFSRSLDVDAWLEEWGS 84
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5340.12754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLL3_ECTSI4.900e-940.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..60
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..150
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..78
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.689

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5340contigH-paniculata_contig5340:6874..7326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5340.12754.1mRNA_H-paniculata_contig5340.12754.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5340 3750..7326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5340.12754.1 ID=prot_H-paniculata_contig5340.12754.1|Name=mRNA_H-paniculata_contig5340.12754.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp
IWCVACCVLLCVSHSLFPSSCCLRSQRAWDKPTATHEGGGVLSKSSGLSN
TSRGCKDMREAALAATMVCAVVAFNTSFKKYRWGKLIWRRPRPRPQKRVS
FSESCTVIHHLPEREDLTDDDRRALCWSPAELREFARSTLIDEWIECWGA
*
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