prot_H-paniculata_contig534.12752.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig534.12752.1
Unique Nameprot_H-paniculata_contig534.12752.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length471
Homology
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BLAST of mRNA_H-paniculata_contig534.12752.1 vs. uniprot
Match: A0A6H5JB15_9PHAE (AhpC-TSA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB15_9PHAE)

HSP 1 Score: 348 bits (894), Expect = 6.300e-114
Identity = 200/390 (51.28%), Postives = 251/390 (64.36%), Query Frame = 0 
Query:   84 LGKQGELMELMAKAQQDRAKKELEDKLRESGDLPEEN----SKPVKPKGG--KIKAERSWRDAGAGASATIPAGPTAQAAAAAPVANPGAASSAQAPATGDTGANQKVASERKVVDPGGIGSRVWASTKIEGRPNDIYFEYDELLESTQHHGGTRSSPRLENPRASYLEYDRLRDEAQWDAIVAGETSVANRSPVASQSEYDAFEDMLTHGTPSTSQGGGGVVAPKVLEKKIQEDMNKSQVTQAFTAGEFAPLDPWRALSDADGTK----VNFGLYRGSKPLLVVADARPGSSELREAMNELNARMPRKLVDVVAVTADSPGSNRKAVKKSRLAFPVLSDDDEGSWMLAYQLKSPTRFFEQTAFLIEPDLGTIIKVWSDFNAASLVDLVK 463
            +GKQGELME MAKAQ+DR K+ELE+KLRESGDLP+E     +KP   KG   +IK +RSWR AGA                            A+ P+                    G+G +VW ST+ EGR  D Y EY++LLEST  H G+R SP +ENPRA Y +++ +RD+AQWDA+VAG+  V NRSPVAS++EY  FE ML+ G   +S   G   A K L K++++     +V   F+ G+FAPLDPWR LSD DG K    VNFGL++G+KPLLVVA+ +PGS  +++AM ELN RMPRKLVDVVAVT D P SNRK  KKSR+ FPVLSD+  G WMLAY++ +     E  AFLIEPDLG I+ VWS+F+A SLVDLVK
Sbjct:    1 MGKQGELMEQMAKAQRDRMKRELEEKLRESGDLPKEEDDDAAKPAAAKGAAARIKPDRSWRQAGA----------------------------AKPPSASXXXXXXXXXXXXXKTGAAGVGGKVWPSTREEGRSGDKYEEYNQLLESTGDHSGSRKSPEVENPRAVYTDWETMRDKAQWDAVVAGKKPVVNRSPVASETEYSDFEAMLSGGARISSNSLGLKAAEKKLAKRVEK-----KVDLTFSRGDFAPLDPWRLLSDVDGNKASGAVNFGLFQGTKPLLVVAEPKPGSGAMKQAMYELNTRMPRKLVDVVAVTVDPPASNRKVAKKSRILFPVLSDEG-GEWMLAYRV-TQGGLRENMAFLIEPDLGRIVNVWSNFDALSLVDLVK 355
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig534.12752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JB15_9PHAE6.300e-11451.28AhpC-TSA domain-containing protein n=2 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 331..469
e-value: 1.2E-13
score: 52.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..470
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.752
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 336..442
e-value: 4.4E-7
score: 29.8
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 335..462

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig534contigH-paniculata_contig534:22814..29317 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig534.12752.1mRNA_H-paniculata_contig534.12752.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig534 22673..30322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig534.12752.1 ID=prot_H-paniculata_contig534.12752.1|Name=mRNA_H-paniculata_contig534.12752.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=471bp
MLRPPLLLLIIPGWAWGFFSPVHISRLATSPGAGNLSSVHASCTNTRFSE
RAEFRGTSHSRQAVSSHALRCHPLFKKGFGKGGLGKQGELMELMAKAQQD
RAKKELEDKLRESGDLPEENSKPVKPKGGKIKAERSWRDAGAGASATIPA
GPTAQAAAAAPVANPGAASSAQAPATGDTGANQKVASERKVVDPGGIGSR
VWASTKIEGRPNDIYFEYDELLESTQHHGGTRSSPRLENPRASYLEYDRL
RDEAQWDAIVAGETSVANRSPVASQSEYDAFEDMLTHGTPSTSQGGGGVV
APKVLEKKIQEDMNKSQVTQAFTAGEFAPLDPWRALSDADGTKVNFGLYR
GSKPLLVVADARPGSSELREAMNELNARMPRKLVDVVAVTADSPGSNRKA
VKKSRLAFPVLSDDDEGSWMLAYQLKSPTRFFEQTAFLIEPDLGTIIKVW
SDFNAASLVDLVKDFLTKSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000866AhpC/TSA
IPR036249Thioredoxin-like_sf