prot_H-paniculata_contig5332.12742.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5332.12742.1
Unique Nameprot_H-paniculata_contig5332.12742.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length185
Homology
BLAST of mRNA_H-paniculata_contig5332.12742.1 vs. uniprot
Match: D7FJQ3_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ3_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 3.690e-95
Identity = 134/174 (77.01%), Postives = 154/174 (88.51%), Query Frame = 0
Query:    5 SRKRSRNASDGENRWDRIRGKFKILLHKMRKDLHFLEVYQQDGWKSSGREKLKPKAELQKAKGRVRSVKMKLREVVKRLTEMNSEGSRWLGLEQDADGNIDVGEVMCTKCSRGDTDDHDDILLCDHAGCFRAYHQKCLTPPIKPEAFPSEEEDWFCWQCECLMDCLEMLENEFQ 178
            SRKRSRNASDGENRWDRIR KFK+LLHKMR+D HFL+VYQQDGWKSSGREKLKP AEL+KA+ R+R ++ +LREV +RLTEMN  G RW  +++D +GNI+V E+MCTKC +GD+DDHDDILLCD+AGCFRAYHQ CL+PPIKPE FP EEEDWFCWQCECL DC EMLENEFQ
Sbjct:    7 SRKRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELEKARERIRGIQAELREVTRRLTEMNPGGLRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQ 180          
BLAST of mRNA_H-paniculata_contig5332.12742.1 vs. uniprot
Match: A0A6H5KZT3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZT3_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 5.850e-92
Identity = 131/172 (76.16%), Postives = 152/172 (88.37%), Query Frame = 0
Query:    7 KRSRNASDGENRWDRIRGKFKILLHKMRKDLHFLEVYQQDGWKSSGREKLKPKAELQKAKGRVRSVKMKLREVVKRLTEMNSEGSRWLGLEQDADGNIDVGEVMCTKCSRGDTDDHDDILLCDHAGCFRAYHQKCLTPPIKPEAFPSEEEDWFCWQCECLMDCLEMLENEFQ 178
            KRSRNASDGENRWDRIR KFK+LLHKMR+D HFL+VYQQDGWKSSGREKLKP AEL+KA+ ++R ++ +LREV +RLTEMN  G RW  +++D +GNI+V E+MCTKC +GD+DDHDDILLCD+AGCFRAYHQ CL+PPIKPE FP EEEDWFCWQCECL DC EMLENEFQ
Sbjct:  144 KRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELEKAREKIRGIQAELREVTRRLTEMNPGGLRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQ 315          
BLAST of mRNA_H-paniculata_contig5332.12742.1 vs. uniprot
Match: UPI0010A36050 (homeobox protein HAT3.1-like n=2 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A36050)

HSP 1 Score: 121 bits (304), Expect = 1.270e-28
Identity = 63/177 (35.59%), Postives = 103/177 (58.19%), Query Frame = 0
Query:    5 SRKRSRNASDGENRWDRIRGKFKILLHKMRKDLHFLEVYQQDGWKSSGREKLKPKAELQKAKGRVRSVKMKLREVVKRLTEMNSEGSRWLGLEQDADGNIDVGEVMCTKCSRGDTDDHDDILLCDHAGCFRAYHQKCLTPPIKPEAFPSEEEDWFCWQCECLMDCLEMLENEFQVSI 181
            +++R R  +D    + RIR + +  L ++  + + ++ Y  +GWK    EKLKP+ ELQ+AK ++ S K+K+R++ + L  + +EG     L  D++G I   ++ C KC   D    +DI+LCD A C R +HQ CL PP+  E FP ++E W C  C+C  DC ++L + F  S+
Sbjct:  382 NKRRERRVTD---EFSRIRARLRYFLSRVSYEQNLIDAYSGEGWKGYSMEKLKPEKELQRAKSKILSFKLKIRDLFRHLDALCAEGRLPQSLF-DSEGEICSEDIFCAKCRSKDLATGNDIILCDGA-CDRGFHQFCLEPPLLSENFPPDDEGWLCPGCDCKDDCFDLLNDSFGTSL 553          
BLAST of mRNA_H-paniculata_contig5332.12742.1 vs. uniprot
Match: A0A7S1J7G6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J7G6_9EUGL)

HSP 1 Score: 118 bits (296), Expect = 2.630e-28
Identity = 58/165 (35.15%), Postives = 98/165 (59.39%), Query Frame = 0
Query:   16 ENRWDRIRGKFKILLHKMRKDLHFLEVYQQDGWKSSGREKLKPKAELQKAKGRVRSVKMKLREVVKRLTEMNSEGSRWLGLEQDADGNIDVGEVMCTKCSRGDTDDHDDILLCDHAGCFRAYHQKCLTPPIKPEAFPSEEEDWFCWQCECLMDCLEMLENEFQVS 180
            E+ W+ +  + +  +  +R++ H L+ Y  +G +S+ REKLKP  E+QKA+ R+   +  +R+++ +L  MN+E + WL +E +    +   +V C+ C   + D  +DIL CD  GC RAYHQ CL P +  E   +EEE+W+C QC C+ +C E +  +F+  
Sbjct:   34 ESVWNGVLRQVRRQVAIVRREQHLLDTYSHEGTRSANREKLKPVQEMQKAQDRIARARQSIRDILAQLAGMNAEHACWL-VEGE---RMHPKDVSCSACGGAECDSENDILCCDAEGCCRAYHQLCLKPHVTTEEH-AEEEEWWCHQCNCMQECYEEINEQFETQ 193          
BLAST of mRNA_H-paniculata_contig5332.12742.1 vs. uniprot
Match: UPI0009E18FBD (homeobox protein HOX1A isoform X1 n=3 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E18FBD)

HSP 1 Score: 119 bits (298), Expect = 7.910e-28
Identity = 63/174 (36.21%), Postives = 104/174 (59.77%), Query Frame = 0
Query:    5 SRKRSRNASDGENRWDRIRGKFKILLHKMRKDLHFLEVYQQDGWKSSGREKLKPKAELQKAKGRVRSVKMKLREVVKRLTEMNSEGSRWLGLEQDADGNIDVGEVMCTKCSRGDTDDHDDILLCDHAGCFRAYHQKCLTPPIKPEAFPSEEEDWFCWQCECLMDCLEMLENEFQ 178
            +RK+  N + G+N   RI    + +L++M  +   ++ Y  DGWK    +K++P+ EL++AK  +   K+K+RE+ +RL  + +EG     L  D+DG ID  ++ C KC   D    +DI+LCD   C R +HQ CL PP+  E  P+ +E W C +C+C +DC+++L +EF+
Sbjct:  137 NRKKKEN-NPGQNELSRIIKHVRYMLNRMNYEQSLIDAYSGDGWKGQSADKIRPEKELERAKSEILRCKLKIREIFQRLDSLLAEGRLQESLF-DSDG-IDSEDIFCGKCGSKDVSADNDIILCDGI-CERGFHQTCLNPPLLSEDIPTGDEGWLCPECDCKVDCIDLL-SEFR 305          
BLAST of mRNA_H-paniculata_contig5332.12742.1 vs. uniprot
Match: A0A6P6AF18_DURZI (homeobox protein HAT3.1-like isoform X1 n=2 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P6AF18_DURZI)

HSP 1 Score: 119 bits (297), Expect = 1.100e-27
Identity = 60/160 (37.50%), Postives = 96/160 (60.00%), Query Frame = 0
Query:   19 WDRIRGKFKILLHKMRKDLHFLEVYQQDGWKSSGREKLKPKAELQKAKGRVRSVKMKLREVVKRLTEMNSEGSRWLGLEQDADGNIDVGEVMCTKCSRGDTDDHDDILLCDHAGCFRAYHQKCLTPPIKPEAFPSEEEDWFCWQCECLMDCLEMLENEFQ 178
            + RIR   + LL+++  +   +  Y  +GWK    EKLKP+ ELQ+A   +   K+K+R++ +R+  + +EG     L  D++G ID  ++ C KC   D   ++DI+LCD A C R +HQ CL PP+  E  P ++E W C +C+C +DC+E++ NE Q
Sbjct:  403 YSRIRAHLRYLLNRINYERSLIAAYSTEGWKGLSLEKLKPEKELQRATSEILRRKLKIRDLFQRIDSLCAEGRLPESLF-DSEGQIDSEDIFCAKCGSKDLSANNDIILCDGA-CDRGFHQYCLQPPLLKEDIPPDDEGWLCPECDCKVDCIELV-NESQ 559          
BLAST of mRNA_H-paniculata_contig5332.12742.1 vs. uniprot
Match: A0A2P6VNL7_9CHLO (PHD-finger family homeodomain n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VNL7_9CHLO)

HSP 1 Score: 118 bits (295), Expect = 2.200e-27
Identity = 63/162 (38.89%), Postives = 97/162 (59.88%), Query Frame = 0
Query:   17 NRWDRIRGKFKILLHKMRKDLHFLEVYQQDGWKSSGREKLKPKAELQKAKGRVRSVKMKLREVVKRLTEMNSEGSRWLGLEQ-DADGNIDVGEVMCTKCSRGDTDDHDDILLCDHAGCFRAYHQKCLTPPIKPEAFPSEEEDWFCWQCECLMDCLEMLENEF 177
            N +DR+  + +  L K+R     +E Y  DGW+ + REK+KP AE+++AK ++   K  +RE V+   +  +EG   +  E  D DG +D   + C+KC   ++D+ +DI+LCD   C RAYH KCL PP+K E  P E+E W C  C+  MD L+++ +EF
Sbjct: 1650 NNYDRMLARLRAQLSKLRHAQALVEAYAADGWRGASREKVKPVAEIKRAKDQITKCKEAIRECVRYCDD--AEGDVPIPAELFDEDGELDTDHMFCSKCRGNESDEENDIILCDGM-CNRAYHVKCLVPPVKIEDLP-EDEGWLCPACDRKMDMLDLINDEF 1807          
BLAST of mRNA_H-paniculata_contig5332.12742.1 vs. uniprot
Match: A0A7S1G4N2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4N2_9STRA)

HSP 1 Score: 112 bits (281), Expect = 3.180e-27
Identity = 63/172 (36.63%), Postives = 97/172 (56.40%), Query Frame = 0
Query:   18 RWDRIRGKFKILLHKMRKDLHFLEVYQQDGWKSSGREKLKPKAELQKAKGRVRSVKMKLREVVKRLTEMNSEGSRWLG-----LEQDADGN--IDVGEVMCTKCSRGDTDDHDDILLCDHAGCFRAYHQKCLTPPIKPEAFPSEEED-WFCWQCECLMDCLEMLENEFQVSI 181
            ++ + R +    L K+R     ++ Y  +GW+ + RE +KPK+E+ KA+  +R+ K  LR ++  L   N +G+         L  DA G   + + ++ C++C + D DD +DILLCDHAGC RAYHQ C+ PP   E  P EE D WFC +C C + CLE +   F  ++
Sbjct:   19 KFQQYRKRVAATLSKVRYLKTLMDAYASNGWQDAKRESVKPKSEISKARQSLRAAKRLLRTILTAL--WNEDGADRAAVTTDLLRADAAGRELVLMEDMPCSRCGQVDADDDNDILLCDHAGCNRAYHQLCMDPPFPTECIPQEELDPWFCNRCRCFLMCLEDVNLAFGTNM 188          
BLAST of mRNA_H-paniculata_contig5332.12742.1 vs. uniprot
Match: A0A2D4BMX4_PYTIN (PHD-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMX4_PYTIN)

HSP 1 Score: 114 bits (286), Expect = 5.160e-27
Identity = 55/161 (34.16%), Postives = 95/161 (59.01%), Query Frame = 0
Query:   21 RIRGKFKILLHKMRKDLHFLEVYQQDGWKSSGREKLKPKAELQKAKGRVRSVKMKLREVVKRLTEMNSEGSR---WLGLEQD-ADGNIDVGEVMCTKCSRGDTDDHDDILLCDHAGCFRAYHQKCLTPPIKPEAFPSEEEDWFCWQCECLMDCLEMLENEF 177
            R+  + + L+ +++    F+E Y+  GW+++ REKLKP  EL  A+ ++   K  +R  +++L ++ ++  R    + L QD +D  ++   + C++C   DT +H+DILLCD  GCFRA+HQ+C  P ++ E  PS +E WFC  C  + + L+ L   F
Sbjct:   28 RLEARVRSLVKQLKFQDTFVEAYEAQGWRNASREKLKPSQELAVARRKILQAKRSVRSTLQQLQQLQAQDPRVPYLVELSQDHSDAPVEYERIHCSRCHSTDTTEHNDILLCDAEGCFRAFHQRCQVPEVRTEDIPSGDEPWFCPACLAIFNALKCLNYAF 188          
BLAST of mRNA_H-paniculata_contig5332.12742.1 vs. uniprot
Match: A0A830BZG0_9LAMI (Pathogenesis-related homeodomain protein n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BZG0_9LAMI)

HSP 1 Score: 116 bits (290), Expect = 9.240e-27
Identity = 58/149 (38.93%), Postives = 90/149 (60.40%), Query Frame = 0
Query:   27 KILLHKMRKDLHFLEVYQQDGWKSSGREKLKPKAELQKAKGRVRSVKMKLREVVKRLTEMNSEGSRWLGLEQDADGNIDVGEVMCTKCSRGDTDDHDDILLCDHAGCFRAYHQKCLTPPIKPEAFPSEEEDWFCWQCECLMDCLEMLEN 175
            + LLH+++ + + ++ Y  +GWK    EKLKP+ ELQ+AK  +   KM++RE+ +RL    + G     L  D+ G ID  ++ C KC   D    +DI+LCD A C R +HQ CL PP+  E  P  +E W C +C+C +DC++ML++
Sbjct:  206 RYLLHRIKYEQNLIDAYSAEGWKGQSLEKLKPEKELQRAKSHILRYKMRIRELFQRLELSLAVGKLPESLF-DSLGEIDCEDIFCAKCGSKDLTLDNDIILCDGA-CERGFHQFCLEPPLLKEHIPPGDEGWLCPECDCKVDCIDMLKD 352          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5332.12742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJQ3_ECTSI3.690e-9577.01PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KZT3_9PHAE5.850e-9276.16PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
UPI0010A360501.270e-2835.59homeobox protein HAT3.1-like n=2 Tax=Prosopis alba... [more]
A0A7S1J7G6_9EUGL2.630e-2835.15Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
UPI0009E18FBD7.910e-2836.21homeobox protein HOX1A isoform X1 n=3 Tax=Phalaeno... [more]
A0A6P6AF18_DURZI1.100e-2737.50homeobox protein HAT3.1-like isoform X1 n=2 Tax=Du... [more]
A0A2P6VNL7_9CHLO2.200e-2738.89PHD-finger family homeodomain n=1 Tax=Micractinium... [more]
A0A7S1G4N2_9STRA3.180e-2736.63Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A2D4BMX4_PYTIN5.160e-2734.16PHD-type domain-containing protein n=1 Tax=Pythium... [more]
A0A830BZG0_9LAMI9.240e-2738.93Pathogenesis-related homeodomain protein n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 110..164
e-value: 4.9E-10
score: 49.4
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 110..165
e-value: 6.1E-9
score: 35.6
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 108..166
score: 10.211
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 73..167
e-value: 9.8E-12
score: 46.7
NoneNo IPR availablePANTHERPTHR12628:SF13HOMEOBOX PROTEIN HAT3.1coord: 8..175
NoneNo IPR availablePANTHERPTHR12628POLYCOMB-LIKE TRANSCRIPTION FACTORcoord: 8..175
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 111..163
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 97..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5332contigH-paniculata_contig5332:10396..13983 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5332.12742.1mRNA_H-paniculata_contig5332.12742.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5332 10396..13983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5332.12742.1 ID=prot_H-paniculata_contig5332.12742.1|Name=mRNA_H-paniculata_contig5332.12742.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=185bp
MVLLSRKRSRNASDGENRWDRIRGKFKILLHKMRKDLHFLEVYQQDGWKS
SGREKLKPKAELQKAKGRVRSVKMKLREVVKRLTEMNSEGSRWLGLEQDA
DGNIDVGEVMCTKCSRGDTDDHDDILLCDHAGCFRAYHQKCLTPPIKPEA
FPSEEEDWFCWQCECLMDCLEMLENEFQVSIYLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD