prot_H-paniculata_contig5322.12729.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5322.12729.1
Unique Nameprot_H-paniculata_contig5322.12729.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length87
Homology
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BLAST of mRNA_H-paniculata_contig5322.12729.1 vs. uniprot
Match: D8LIC5_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC5_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 3.020e-12
Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 0 
Query:   38 NHFPAGKDLVLGMLNKDVGTRYTAKDVLRHPWITQRVRRQDEHPEHFEF 86
            N    GKDLVLGMLNKD   RYTAK +L HPWITQR  R++EHPE FEF
Sbjct:  718 NFSEDGKDLVLGMLNKDREKRYTAKAILAHPWITQRECRREEHPELFEF 766
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BLAST of mRNA_H-paniculata_contig5322.12729.1 vs. uniprot
Match: A0A6H5L0T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T4_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 3.070e-12
Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 0 
Query:   38 NHFPAGKDLVLGMLNKDVGTRYTAKDVLRHPWITQRVRRQDEHPEHFEF 86
            N    GKDLVLGMLNKD   RYTAK +L HPWITQR  R++EHPE FEF
Sbjct: 1192 NFSEDGKDLVLGMLNKDREKRYTAKAILAHPWITQRECRREEHPELFEF 1240
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BLAST of mRNA_H-paniculata_contig5322.12729.1 vs. uniprot
Match: A0A836CC15_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC15_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 5.750e-7
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:   44 KDLVLGMLNKDVGTRYTAKDVLRHPWITQRVRRQDEHPEHFEF 86
            +DL+LG+LNKD+  R +AK+ L HPWI  RV R D  PE F+F
Sbjct:  569 RDLMLGLLNKDIKRRMSAKEALLHPWILSRVDRMDTEPETFDF 611
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5322.12729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LIC5_ECTSI3.020e-1269.39N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5L0T4_9PHAE3.070e-1269.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CC15_9STRA5.750e-755.81Kinase-like domain-containing protein n=1 Tax=Trib... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.510.10coord: 17..85
e-value: 5.7E-7
score: 31.1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..86
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 15..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5322contigH-paniculata_contig5322:1018..2054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5322.12729.1mRNA_H-paniculata_contig5322.12729.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5322 934..2718 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5322.12729.1 ID=prot_H-paniculata_contig5322.12729.1|Name=mRNA_H-paniculata_contig5322.12729.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp
MSIIIIIIIIIIMLACQVKFVSFHGTRSFYLFCIRNNNHFPAGKDLVLGM
LNKDVGTRYTAKDVLRHPWITQRVRRQDEHPEHFEF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom_sf