mRNA_H-paniculata_contig5314.12721.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5314.12721.1 vs. uniprot
Match: D8LL67_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL67_ECTSI) HSP 1 Score: 466 bits (1199), Expect = 1.870e-155 Identity = 252/486 (51.85%), Postives = 302/486 (62.14%), Query Frame = 1
Query: 1 TTQSRFTIDLYE-ADCTGGKLATLCNKPE-----IGCSDSAGDYPVTIPATIIAGEYSIKIALFGATMPSGCSPAF-YVESNAVATVAPTVGXXXXXXXXXXXXXTATPTNGEDADSPWIGHLETKEPCDSTISFDVRYAESSSRIYFEHSDGERGGCATLSQVLDLRTETNGTIKARSSNEVTGYWLVDANIIVSDGITLQLYGTEIGGDCSELRIKSTDDVFYNLRGHGGSLDMMNTKITSWDTDNNA--VHEPSDYSETSDDTKPRSYIRCLFDMVATRGDVRNSNIHHLFYGLYTYGHNGGLWNDNQMHDNEWYGFDPHDDSDYLTIHNNKVWGNGKHGIIASKRCNHVSIQNNVVYDGGEEAAGIFLHRSSDHAIVKGNHIYNMQDAGMATLESFNINFQNNLVQNCKYGIRLSLGAAGNTVQDNTFEDLSSYAMYTYAGSNEPDVEG-GAYRPYNNYFLNNALDTPVVCKIKEADGIVMT 1428
+TQ RF I+LY A C+G ++A +C K IGC D+AGDY V IP I++GEYSIK+ +FGAT PSGCSP F V +N+ VG T P SPW G+ K CD TI VRYA S+ R+YFEH+DG GGCATLS VL R E NGT+K ++++VTG+WL++A++ V++G+TLQL+G+ GGDC LRIKSTD F+NLRGHGGSLD ++T ITSWDTD V DY+ DD PRSYIRC TR R+S YGH GGLWN N MHDNEWYGFDPHDDSDYLTIHNN VW N AAGIFLHRSSD AIV GNHI++MQD+G+ATLESF+I F NNL++ CKYG+RLSLGA N V NTF DLSSY +TY GSNEPDV YRP+ NN T + K+KEAD +T
Sbjct: 164 STQGRFDIELYSGAGCSGSRVADICGKTNSQGDLIGCPDTAGDYDVVIPTDIMSGEYSIKVGVFGATSPSGCSPVFSVVATNSGVIDTGAVGTD-----------TVVP-------SPWDGYAFPKPACDPTIPVTVRYAASTQRVYFEHTDGTTGGCATLSDVLAERVEKNGTVKIMNASQVTGHWLIEADLYVTNGVTLQLHGSASGGDCDALRIKSTDTEFFNLRGHGGSLDFLDTNITSWDTDLAVPNVRASGDYNSVDDDADPRSYIRCE-GSARTRATPRSST---------RYGHLGGLWNGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNXXXXXXXXXXXXXXXXXXXXXXXXXSTAAGIFLHRSSDSAIVTGNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYIGSNEPDVPPYTGYRPFGTSVQNNVFSTWHMGKLKEADTTTIT 621
BLAST of mRNA_H-paniculata_contig5314.12721.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 327 bits (838), Expect = 2.420e-103 Identity = 194/453 (42.83%), Postives = 244/453 (53.86%), Query Frame = 1
Query: 295 TATPTNGEDADSPWIGHLETKEPCDSTISFDVRYAESSSRIYFEHSDGE-RGGCATLSQVLDLRT---------ETNGTIKARSSNEVTGYWLVDANIIVSDGITLQLYGTEIGGDCSELRIKSTDDVFYNLRGHGGSLDMMNTKITSWDTDNNAVHEPSDYSETSDDTKPRSYIRC------------------------------------------------------------LFDMVATRGDVRNSNIHHLFYGLYTYGHNGGLWNDNQMHDNEWYGFDPHDDSDYLTIHNNKVWGNGKHGIIASKRCNHVSIQNNVVYDGGEEAAGIFLHRSSDHAIVKGNHIYNMQDAGMATLESFNINFQNNLVQNCKYGIRLSLGAAGNTVQDNTFEDLSSYAMYTYAGSNEPDVEGGAYRPYNNYFLNNALD-TPVVCKIKEADGIVMTGSSF 1440
+ TP D SP +K CDS I +RYA ++ R+Y E +DGE RGGCATL Q+ + R +G + S TG WL+ + V DGITL++YGT+ GGD ELR+ ST + + NLR HGGSLD + TK+ SWDT N+ E D+T RSYI +FD V G++ +S+IHHL +GLYTYGH G W N+MHDN YGFDPHDDSD+LTIH+N+V+ NG HGIIASKRCN VSIQ N VY G E +AGIFLHRSSD AIVKGN++++ DAG+A LESFN + N +N KYG+R+S+G A N +N + S Y YTY GS+EPDV R NN F N+ KIKEADG + F
Sbjct: 22 STTPAAAADTASP--NDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDV----SETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDE--------DETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSG-RSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 459
BLAST of mRNA_H-paniculata_contig5314.12721.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 316 bits (810), Expect = 3.320e-99 Identity = 183/426 (42.96%), Postives = 235/426 (55.16%), Query Frame = 1
Query: 370 STISFDVRYAESSSRIYFEHSDG--ERGGCATLSQVLDLRTETNGTIKA------RSSNEVTGYWLVDANIIVSDGITLQLYGTEIGGDCSELRIKSTDDVFYNLRGHGGSLDMMNTKITSWDTDNNAVHEPSDYSETSDDTKPRSYIRCL------------------------------------------------------------FDMVATRGDVRNSNIHHLFYGLYTYGHNGGLWNDNQMHDNEWYGFDPHDDSDYLTIHNNKVWGNGKHGIIASKRCNHVSIQNNVVYDGGEEAAGIFLHRSSDHAIVKGNHIYNMQDAGMATLESFNINFQNNLVQNCKYGIRLSLGAAGNTVQDNTFEDLSSYAMYTYAGSNEPDVEGGAYRPYNNYFLNNALD-TPVVCKIKEADGIVMTGSSF 1440
S I+ +RYA +++R+Y E +D RGGC TL Q+ + R G + A S TG WL+ + V DGITL++YG+E GGD ELR+ ST++ F NLR HGGSLD ++TK+ SWDT N+ E D+T RSYI + FD V G+V +S+IHH+ +GLYTYGH G W N+MHDN YGFDPHDDSD+LTIH+N+V+ NG HGIIASKRCN VSIQ N VY G E +AGIFLHRSSD AIVKGN++++ DAG+A LESFN + N +N KYG+R S+G A N +NT + + Y Y+Y G++EPDV R NN F N+ KIKEADG + F
Sbjct: 40 SDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAG-KGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDE--------DETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSG-RSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 455
BLAST of mRNA_H-paniculata_contig5314.12721.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 300 bits (769), Expect = 1.610e-93 Identity = 170/428 (39.72%), Postives = 232/428 (54.21%), Query Frame = 1
Query: 355 KEPCDSTISFDVRYAESSSRIYFEHSDGE-RGGCATLSQVLDLRTETNG--TIKARS---SNEVTGYWLVDANIIVSDGITLQLYGTEIGGDCSELRIKSTDDVFYNLRGHGGSLDMMNTKITSWDTDNNAVHEPSDYSETSDDTKPRSYIRC------------------------------------------------------------LFDMVATRGDVRNSNIHHLFYGLYTYGHNGGLWNDNQMHDNEWYGFDPHDDSDYLTIHNNKVWGNGKHGIIASKRCNHVSIQNNVVYDGGEEAAGIFLHRSSDHAIVKGNHIYNMQDAGMATLESFNINFQNNLVQNCKYGIRLSLGAAGNTVQDNTFEDLSSYAMYTYAGSNEPDVEGGAYRPYNNYFLNNALDTPVVCKIKEADGIVMTGSSF 1440
K CDS+I+ VRY S+R+Y E ++G RGGC TL Q+ + + + + + +S S TG WL+ + V DGITLQ++G GGD ELR+ ST D F +LR +GGSLD ++TK+ +WDT NA + D++ RSYI LFD V G++ +S+IHH +G+YTYGH G W N+MHDN YGFDPHDDSD+LTIH+N+VW NG HGIIASKRCN VSIQ N VY G +AGIFLHRSSD+ IVKGN++++ DAG+A LESFN + +N +N KYG+RLS+G N N + + ++Y G+++P+V N + NN + +KEADG ++F
Sbjct: 7 KPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQ--------DESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTF 426
BLAST of mRNA_H-paniculata_contig5314.12721.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 288 bits (737), Expect = 1.220e-89 Identity = 163/368 (44.29%), Postives = 208/368 (56.52%), Query Frame = 1
Query: 376 ISFDVRYAESSSRIYFEHSDG--ERGGCATLSQVLDLRTETNGTIKA------RSSNEVTGYWLVDANIIVSDGITLQLYGTEIGGDCSELRIKSTDDVFYNLRGHGGSLDMMNTKITSWDTDNNAVHEPSDYSETSDDTKPRSYIRCL------------------------------------------------------------FDMVATRGDVRNSNIHHLFYGLYTYGHNGGLWNDNQMHDNEWYGFDPHDDSDYLTIHNNKVWGNGKHGIIASKRCNHVSIQNNVVYDGGEEAAGIFLHRSSDHAIVKGNHIYNMQDAGMATLESFNINFQNNLVQNCKYGIRLSLGAAGNTVQDNTFED 1275
I+ +RYAES++R+Y E +D RGGC TL Q+ + R G + A S TG WL+ + V DGITL++YG+E GGD ELR+ ST++ F NLR HGGSLD ++TK+ SWDT N+ E D+T RSYI + FD V G+V +S+IHH+ +GLYTYGH G W N+MHDN YGFDPHDDSD+LTIH+N+V+ NG HGIIASKRCN VSIQ N VY G E +AGIFLHRSSD AIVKGN++++ DAG+A LESFN + N +N KYG+R S+G A N +NT +
Sbjct: 42 IAVSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAG-KGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDE--------DETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISN 400
BLAST of mRNA_H-paniculata_contig5314.12721.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 294 bits (753), Expect = 2.720e-89 Identity = 172/425 (40.47%), Postives = 232/425 (54.59%), Query Frame = 1
Query: 364 CDSTISFDVRYAESSSRIYFEHSDGERGGCATLSQVLDLRTETNGTIKARSSNEV-----TGYWLVDANIIVSDGITLQLYGTEIGGDCSELRIKSTDDVFYNLRGHGGSLDMMNTKITSWDTDNNAVHE-----------PSDYSETS----DDTKPRSYIRCLFDMVATR-------------------------------------------GDVRNSNIHHLFYGLYTYGHNGGLWNDNQMHDNEWYGFDPHDDSDYLTIHNNKVWGNGKHGIIASKRCNHVSIQNNVVYDGGEEAAGIFLHRSSDHAIVKGNHIYNMQDAGMATLESFNINFQNNLVQNCKYGIRLSLGAAGNTVQDNTFEDLSSYAMYTYAGSNEPDVEGGAYRPYNNYFLNNALDTP---VVCKIKEADGIVMTGSSF 1440
CDS + VR+ + + YFE GGC TL+Q+ + + +N+V TGYWL+D N+ V DG TL ++GT GD LR+ ST D F +RG+GG+L +T +TSWDTDN E + + +++ D + + C D++++ GD+ NS I+ ++YG Y+YGH GG+W+ N M DN YGFDPHDDSD LTI NN V+GNG HGIIASKRCN+V I NN VYDGGE+A GIFLHRSSD A V N +YNMQDAGMA +ES++ N +N NC+YGIRLSLG+ N + +N F ++ Y +YTY GS++PDV RP +N F N ++T + IKE D V + F
Sbjct: 178 CDSAAT--VRFTDDIA--YFEG-----GGCGTLTQMYEAQEGDGPLYVLDENNDVVGGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLSTSDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVF 593
BLAST of mRNA_H-paniculata_contig5314.12721.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI) HSP 1 Score: 297 bits (760), Expect = 7.330e-88 Identity = 163/363 (44.90%), Postives = 224/363 (61.71%), Query Frame = 1
Query: 445 GGCATLSQVLDLRTETN--GTIKARSSNE------VTGYWLVDANIIVSDGITLQLYGTEIGGDCSELRIKST-DDVFYNLRGHGGSLDMMNTKITSWDTDNNAVHEPSDYSETSDDTKPRSYIRCLFDMVA-------------------TRGDVRNSNIHHLFYGLYTYGHNGGLWNDNQMHDNEWYGFDPHDDSDYLTIHNNKVWGNGKHGIIASKRCNHVSIQNNVVYDGGEEAAGIFLHRSSDHAIVKGNHIYNMQDAGMATLESFNINFQNNLVQNCKYGIRLSLGAAGNTVQDNTFEDLSSYAMYTYAGSNEPDVEGGAYRPYNNYFLNNALDTPVV---CKIKEADGIVMTGSSF 1440
GGCATL+ + + N G + SN+ TGYWL+ +I V + LQ++G + GGD LRI+ST + +Y +RGHGGSL M+TK+TSWDTD V+ ++Y+ K RS++RC+ + +A RGD+ +SNI+ ++YG Y++GH+GG+W NQMHDN YGFDPHDDSD L I N VWGNG HGIIASKRCN+V I +N VYDGGE A GIFLHRSSD V N +Y+M+DAGMA +ES + +N N KYGIRLS+GA+ N V++N F + Y +YTY G++EP+ A + ++ ++N V KI++A+GI T + F
Sbjct: 507 GGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTASNDYYEIRGHGGSLSFMDTKVTSWDTDEKEVN--TNYN------KERSFVRCVSEELADNPDTCDGHAVNHMGECRMVRGDIIDSNIYGMYYGHYSFGHDGGIWTGNQMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGASRNVVENNKFSECDQYGIYTYQGNDEPE----ASKDWDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKF 857
BLAST of mRNA_H-paniculata_contig5314.12721.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 281 bits (718), Expect = 3.100e-86 Identity = 166/408 (40.69%), Postives = 225/408 (55.15%), Query Frame = 1
Query: 430 SDGERGGCATLSQVLDLRTETN-----GTIKARSSNE--------VTGYWLVDANIIVSDGITLQLYGTEIGGDCSELRIKSTDDV-FYNLRGHGGSLDMMNTKITSWDTDNNAVHEPSDYSETSDDTKPRSYIRCL--------------------------------------------------------FDMVATRGDVRNSNIHHLFYGLYTYGHNGGLWNDNQMHDNEWYGFDPHDDSDYLTIHNNKVWGNGKHGIIASKRCNHVSIQNNVVYDGGEEAAGIFLHRSSDHAIVKGNHIYNMQDAGMATLESFNINFQNNLVQNCKYGIRLSLGAAGNTVQDNTFEDLSSYAMYTYAGSNEPDVEGGAYRPYNNYFLNNALD-TPVVCKIKEADGIVMTGSSF 1440
++G+ GGC TLS + + N G + SN+ TG WL+ A++ V+ G TL G +GG+C+ELRI+ST F+ +RGHGG+L +T +TSWD D E Y + RS+IRC+ FD V GD++ S+IHH++YG+Y++GH GG+W +N MHDN YGFDPHDDSDYL I NKV+ N HGIIASKRCN+V I +N VYDGG +AAGIFLHRS D + V GN I NM DAG+A LE+ + +N V ++GIR+ LG++ N V DN F+++ + M+TY GS+EP V GG RP +N F NN + T KIKE+D I +T ++F
Sbjct: 4 AEGDGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQET--YKDG------RSFIRCVSEVLTGEDTCAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGGG--RPCDNEFYNNTIQATETGVKIKESDNISITNNAF 401
BLAST of mRNA_H-paniculata_contig5314.12721.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 285 bits (728), Expect = 1.080e-83 Identity = 165/404 (40.84%), Postives = 226/404 (55.94%), Query Frame = 1
Query: 445 GGCATLSQVLDLRTETN--GTIKARSSNE------VTGYWLVDANIIVSDGITLQLYGTEIGGDCSELRIKSTDDV-FYNLRGHGGSLDMMNTKITSWDTDNNAVHEPSDYSETSDDTKPRSYIRCL------------------------------------------------------------FDMVATRGDVRNSNIHHLFYGLYTYGHNGGLWNDNQMHDNEWYGFDPHDDSDYLTIHNNKVWGNGKHGIIASKRCNHVSIQNNVVYDGGEEAAGIFLHRSSDHAIVKGNHIYNMQDAGMATLESFNINFQNNLVQNCKYGIRLSLGAAGNTVQDNTFEDLSSYAMYTYAGSNEPDVEGGAYRPYNNYFLNNALDTPVV---CKIKEADGIVMTGSSF 1440
GGCATL+ + + N G + SN+ TGYWL+ +I V +G LQ++G + GGD LRI+ST +Y +RGHGGSL M+TK+TSWDTD V+ ++Y K RS+IRC+ F+ RGD+ +S+I+ ++YG Y++GH+GG+W N+MHDN YGFDPHDDSD L I N VWGNG HGIIASKRCN+V I +N VYDGGE A GIFLHRSSD V GN +Y+M+DAGMA +ES + +N N KYGIRLS+GAA N V++N+F + Y +YTY G+++P+ A + ++ ++N V KI++A+GIV T ++F
Sbjct: 405 GGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVN--TNYK------KERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPE----ASKDWDGLLVDNTFHANTVEGGVKIQKAEGIVFTDNNF 796
BLAST of mRNA_H-paniculata_contig5314.12721.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 283 bits (725), Expect = 5.770e-83 Identity = 174/406 (42.86%), Postives = 222/406 (54.68%), Query Frame = 1
Query: 391 RYAESSSRIYFEHSDGERGGCATLSQVLDLR-TETNGTIKARS------------SNEVTGYWLVDANIIVSDGITLQLYGTEIGGDCSELRIKST-DDVFYNLRGHGGSLDMMNTKITSWDTDNNAVHEPSDYSE----------TSDDT-----------------------------------KPRSYIRCL-----FDMVATRGDVRNSNIHHLFYGLYTYGHNGGLWNDNQMHDNEWYGFDPHDDSDYLTIHNNKVWGNGKHGIIASKRCNHVSIQNNVVYDGGEEAAGIFLHRSSDHAIVKGNHIYNMQDAGMATLESFNINFQNNLVQNCKYGIRLSLGAAGNTVQDNTFEDLSSYAMYTYAGSNEPDVEGGAYRPYNNYF-LNNALDTPVVCKIKEAD 1413
RYA SS +++GE GC T++ + + R TE +G+ K + +T WL+ A + ++ G GT GGDC++LRI+ST D F+ +RGHGGSL +T +TSWDT N E + T DD K R + + L F++ GD+ S+IHHL+YG Y+YGH GG+W +N+MHDN YGFDPHDDSDYLTI N+V+ N HGIIASKRCN+V I N V DGG AAGIFLHRSSD A V N I NMQDAG+A LESF+ N++ KYGIR+SLG+ N V N+F D+S Y +YTY GS+EPDV G RP N LN D P+ KIKE D
Sbjct: 431 RYAASSGVAGRLYAEGE--GCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVSDG--RPSGNVLALNLVEDCPIGVKIKEGD 832 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5314.12721.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5314.12721.1 >prot_H-paniculata_contig5314.12721.1 ID=prot_H-paniculata_contig5314.12721.1|Name=mRNA_H-paniculata_contig5314.12721.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=480bp TTQSRFTIDLYEADCTGGKLATLCNKPEIGCSDSAGDYPVTIPATIIAGEback to top mRNA from alignment at H-paniculata_contig5314:210..6398- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5314.12721.1 ID=mRNA_H-paniculata_contig5314.12721.1|Name=mRNA_H-paniculata_contig5314.12721.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6189bp|location=Sequence derived from alignment at H-paniculata_contig5314:210..6398- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5314:210..6398- >mRNA_H-paniculata_contig5314.12721.1 ID=mRNA_H-paniculata_contig5314.12721.1|Name=mRNA_H-paniculata_contig5314.12721.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2880bp|location=Sequence derived from alignment at H-paniculata_contig5314:210..6398- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |