mRNA_H-paniculata_contig5309.12713.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5309.12713.1
Unique NamemRNA_H-paniculata_contig5309.12713.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5309.12713.1 vs. uniprot
Match: D8LR18_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR18_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 3.040e-40
Identity = 159/488 (32.58%), Postives = 204/488 (41.80%), Query Frame = 1 
Query:   61 WKCEKCGREVPLRNREVHARRCQGIIAPRQLESPPPPL--PPSPPRQAPEPQTHTLPGSPNVFTP----------RHQQRATGGRGGGRGRAGREAAVAMARNEDPSGAMESSPSQ-WKCSACTFLNARDLLSCEMCSTAIPAGERPPDAIYRDMLISDTPAGNNFGLDSHLGSSIVAEWMAAMEEEEERFRQLERRYNRIGHTTRGGGSGXXXXXXXXXG-PSVSDAATGSAIGAVGAGLIAAMAPGNRRSSRVVSSMFQGALLGGVAGVTIG-----PELRRSTSDSSSRARESRAYHEAGDEISTQDLDLLAEYRRLVRQPPPATQRVPGVRRDNDGGGRSAAQNFEEVMLARHLRQMGI-LDPTISRHER----------------RLLRARRGVGGGGGSQAPGRGSQPASAGTVSSLPEEVVDRVFLDRLPEDGRQCCICLENYCEREVVARLPCLHLYHANCIKSWLSTSSTCPQCKHSVN 1416
            W C++CG EVP+ NREVH  +C+   +P QL SPPP    PPSP    P+ Q    P S NVFTP          R   +  G    GRG A               G  ES  +  W C+ACT+LN   +  C+MC T +   +RPPDA YRD LI                                                      XXX      G  ++S AA GSAIGA+G  L++A+ PG  R+S V+SSMFQGAL+GG+AG  +G     P                                 ++ +   VR P    +R           GR      E +MLAR L  + +       R E                 R L   +     GG      G+ PASA  +++LP E +    L  L +DGRQCCICLE++   E   RLPCLHLYH  CI++WL TS TCPQCK  V+
Sbjct:    6 WVCQRCGHEVPIDNREVHEAQCRRN-SPAQLLSPPPVTGSPPSP--FDPDNQ----PFSRNVFTPAQPPAAEAAARESGQPCGFAAAGRGAASXXXXXXXXXXXSTEGEGESGDTTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQGLLDGRTTISGAAAGSAIGAIGGALLSAVQPG-ARASGVMSSMFQGALMGGMAGAALGGLSDEPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVSSFE-FVRGPTARVRR-----------GRDVVSEMESLMLARRLEALSLPASAAAMRREGGXXXXXXXSSIYAGILRQLAEAQNHDAAGGDAXXXXGTSPASARAIAALPGEALTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTVCIENWLQTSGTCPQCKFRVD 473
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BLAST of mRNA_H-paniculata_contig5309.12713.1 vs. uniprot
Match: A0A6H5L176_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L176_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 3.050e-18
Identity = 60/130 (46.15%), Postives = 71/130 (54.62%), Query Frame = 1 
Query: 1027 GRSAAQNFEEVMLARHLRQMGILDPTISRHERRLLRARRGVGGGGGSQAPGRGSQPASAGTVSSLPEEVVDRVFLDRLPEDGRQCCICLENYCEREVVARLPCLHLYHANCIKSWLSTSSTCPQCKHSVN 1416
            GR A    E +MLAR       LD  I R   RL  A      GG        S PASA  +++LP E +    L  L +DGRQCCICLE +   E   RLPCLHLYH+ CI++WL TS TCPQCK  V+
Sbjct:  488 GRDAVSEVESLMLAR-------LDARILR---RLAEAHNHDAAGGXXXXXXXAS-PASARAIAALPGETLTAGSLAHLKDDGRQCCICLEEFEAGERATRLPCLHLYHSVCIENWLQTSGTCPQCKFRVD 606
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BLAST of mRNA_H-paniculata_contig5309.12713.1 vs. uniprot
Match: A0A7S0Y4G8_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y4G8_HEMAN)

HSP 1 Score: 75.1 bits (183), Expect = 1.270e-12
Identity = 31/79 (39.24%), Postives = 50/79 (63.29%), Query Frame = 1 
Query: 1168 QAPGRGSQPASAGTVSSLPEEVVDRVFLDRLPEDGRQCCICLENYCEREVVARLPCLHLYHANCIKSWLSTSSTCPQCK 1404
            QA   G++P++ G +  LP+  + RV  ++L E G  C ICL +Y E ++   LPC+H++H+ C+  WL+ S +CP CK
Sbjct:   26 QASVEGNRPSTKGEMRMLPQHALTRVDAEKLGELGLNCIICLTDYEEGDMTKLLPCMHVFHSECVDEWLAISRSCPMCK 104
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BLAST of mRNA_H-paniculata_contig5309.12713.1 vs. uniprot
Match: A0A7S4MPT7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MPT7_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.200e-11
Identity = 37/85 (43.53%), Postives = 50/85 (58.82%), Query Frame = 1 
Query: 1162 GSQAPGRGSQPASAGTVSSLPEEVVDRVFLDRLPEDGRQCCICLENYCEREVVARLPCLHLYHANCIKSWLSTSSTCPQCKHSVN 1416
            G  +  RG+ PA    +S+LP   +     D LPED RQC ICLE++   +    LPCLH +H  CI  WL  ++TCP CKH+V+
Sbjct:   67 GDGSENRGADPA---VMSALPTATIGDPTKD-LPEDRRQCSICLEDFATGDERKTLPCLHGFHEECIDRWLEGNATCPVCKHAVD 147
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BLAST of mRNA_H-paniculata_contig5309.12713.1 vs. uniprot
Match: A0A1E7FA57_9STRA (RING-type domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FA57_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.540e-11
Identity = 33/77 (42.86%), Postives = 45/77 (58.44%), Query Frame = 1 
Query: 1195 ASAGTVSSLPEEVVDRVFL---DRLPEDGRQCCICLENYCEREVVARLPCLHLYHANCIKSWLSTSSTCPQCKHSVN 1416
            A  G +  LP  ++    L     LPED RQC ICLE++ + E  + LPCLH +H NC   WL T+ +CP CKH ++
Sbjct:   19 ADEGDIRQLPTHILKDDPLKGPSALPEDARQCLICLEDFAKGERRSILPCLHGFHTNCSTKWLRTNGSCPICKHRIS 95
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BLAST of mRNA_H-paniculata_contig5309.12713.1 vs. uniprot
Match: A0A7S0V7P0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V7P0_9CRYP)

HSP 1 Score: 65.5 bits (158), Expect = 1.930e-9
Identity = 29/71 (40.85%), Postives = 41/71 (57.75%), Query Frame = 1 
Query: 1183 GSQPASAGTVSSLPEEVVDRVFLDRLPEDGRQCCICLENYCEREVVARLPCLHLYHANCIKSWLSTSSTCP 1395
            G +PA+ G +  LP  V+ R    +L E G  C ICL +Y E +    LPC+HL+H+ C+  WL  S +CP
Sbjct:   33 GDKPATKGEMRMLPLHVLTRSDAAKLGELGLNCIICLTDYEEGDTTKLLPCMHLFHSECVDEWLGISRSCP 103
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BLAST of mRNA_H-paniculata_contig5309.12713.1 vs. uniprot
Match: M1DX13_SOLTU (RING-H2 finger protein RHG1a n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M1DX13_SOLTU)

HSP 1 Score: 67.4 bits (163), Expect = 2.810e-9
Identity = 25/51 (49.02%), Postives = 34/51 (66.67%), Query Frame = 1 
Query: 1261 PEDGRQCCICLENYCEREVVARLPCLHLYHANCIKSWLSTSSTCPQCKHSV 1413
            PE    CCICLE YC++E +AR+ C H+YH +C+K W    +TCP C+  V
Sbjct:  107 PETKDHCCICLEEYCDKEELARIDCGHMYHMDCLKEWNKIVNTCPVCRRRV 157
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BLAST of mRNA_H-paniculata_contig5309.12713.1 vs. uniprot
Match: A0A1C7N1K4_9FUNG (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N1K4_9FUNG)

HSP 1 Score: 69.7 bits (169), Expect = 5.260e-9
Identity = 32/79 (40.51%), Postives = 43/79 (54.43%), Query Frame = 1 
Query: 1189 QPASAGTVSSLPEEVVD----RVFLDRLPEDGRQCCICLENYCEREVVARLPCLHLYHANCIKSWLSTSSTCPQCKHSV 1413
            Q  SA      PE+V+D    R   D+       C +C +N+   E V  LPCLH++H +CIK WL  + TCP C+HSV
Sbjct:  285 QAGSASAPPPAPEQVIDSLPKRSLTDKEKAQEIDCAVCKDNFEPTEQVIELPCLHIFHDDCIKPWLKLNGTCPVCRHSV 363
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BLAST of mRNA_H-paniculata_contig5309.12713.1 vs. uniprot
Match: A0A426XEQ1_ENSVE (RING-type domain-containing protein n=5 Tax=Musaceae TaxID=4637 RepID=A0A426XEQ1_ENSVE)

HSP 1 Score: 68.2 bits (165), Expect = 6.820e-9
Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 1 
Query: 1252 DRLPEDGRQCCICLENYCEREVVARLPCLHLYHANCIKSWLSTSSTCPQCKHSV 1413
            D L  + ++CCICL  Y ++E V +LPCLH++H NC+  WL   S CP CK  +
Sbjct:  226 DDLANENQECCICLAKYSDKEEVRQLPCLHVFHLNCVDQWLRIMSACPLCKQGL 279
[Close]
BLAST of mRNA_H-paniculata_contig5309.12713.1 vs. uniprot
Match: A0A0F7SWS7_PHARH (FOG: Predicted E3 ubiquitin ligase n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SWS7_PHARH)

HSP 1 Score: 69.7 bits (169), Expect = 7.400e-9
Identity = 29/74 (39.19%), Postives = 46/74 (62.16%), Query Frame = 1 
Query: 1192 PASAGTVSSLPEEVVDRVFLDRLPEDGRQCCICLENYCEREVVARLPCLHLYHANCIKSWLSTSSTCPQCKHSV 1413
            PAS   ++ LP   +  ++LD +  D + C IC+  +   E   +LPC HL+H+NCI +WL T+ TCP C++S+
Sbjct:  321 PASKSQINDLPVIPISSIYLDGM--DDKNCTICMSAFEPGEEGKKLPCTHLFHSNCISTWLETNGTCPICRYSL 392
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5309.12713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR18_ECTSI3.040e-4032.58RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L176_9PHAE3.050e-1846.15RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S0Y4G8_HEMAN1.270e-1239.24Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S4MPT7_9STRA1.200e-1143.53Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1E7FA57_9STRA1.540e-1142.86RING-type domain-containing protein n=1 Tax=Fragil... [more]
A0A7S0V7P0_9CRYP1.930e-940.85Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
M1DX13_SOLTU2.810e-949.02RING-H2 finger protein RHG1a n=1 Tax=Solanum tuber... [more]
A0A1C7N1K4_9FUNG5.260e-940.51RING-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A426XEQ1_ENSVE6.820e-946.30RING-type domain-containing protein n=5 Tax=Musace... [more]
A0A0F7SWS7_PHARH7.400e-939.19FOG: Predicted E3 ubiquitin ligase n=1 Tax=Phaffia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5309contigH-paniculata_contig5309:1497..9835 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score172.6
Seed ortholog evalue4.4e-40
Seed eggNOG ortholog2880.D8LR18
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsKOG0800@1,KOG0800@2759
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-06_004730.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1858
Cds size1374
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5309.12713.1prot_H-paniculata_contig5309.12713.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5309 1936..9790 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930537.7826653-UTR-H-paniculata_contig5309:1496..19351622930537.7826653-UTR-H-paniculata_contig5309:1496..1935Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5309 1497..1935 -
1691481338.5620713-UTR-H-paniculata_contig5309:1496..19351691481338.5620713-UTR-H-paniculata_contig5309:1496..1935Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5309 1497..1935 -
1622930537.8433166-UTR-H-paniculata_contig5309:9790..98351622930537.8433166-UTR-H-paniculata_contig5309:9790..9835Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5309 9791..9835 -
1691481338.5994825-UTR-H-paniculata_contig5309:9790..98351691481338.5994825-UTR-H-paniculata_contig5309:9790..9835Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5309 9791..9835 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930537.8002706-CDS-H-paniculata_contig5309:1935..32671622930537.8002706-CDS-H-paniculata_contig5309:1935..3267Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5309 1936..3267 -
1691481338.573819-CDS-H-paniculata_contig5309:1935..32671691481338.573819-CDS-H-paniculata_contig5309:1935..3267Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5309 1936..3267 -
1622930537.815247-CDS-H-paniculata_contig5309:9748..97901622930537.815247-CDS-H-paniculata_contig5309:9748..9790Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5309 9749..9790 -
1691481338.5866916-CDS-H-paniculata_contig5309:9748..97901691481338.5866916-CDS-H-paniculata_contig5309:9748..9790Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5309 9749..9790 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5309.12713.1

>prot_H-paniculata_contig5309.12713.1 ID=prot_H-paniculata_contig5309.12713.1|Name=mRNA_H-paniculata_contig5309.12713.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=458bp
MVTMNWKCEKCGREVPLRNREVHARRCQGIIAPRQLESPPPPLPPSPPRQ
APEPQTHTLPGSPNVFTPRHQQRATGGRGGGRGRAGREAAVAMARNEDPS
GAMESSPSQWKCSACTFLNARDLLSCEMCSTAIPAGERPPDAIYRDMLIS
DTPAGNNFGLDSHLGSSIVAEWMAAMEEEEERFRQLERRYNRIGHTTRGG
GSGGHGAGGVGGGPSVSDAATGSAIGAVGAGLIAAMAPGNRRSSRVVSSM
FQGALLGGVAGVTIGPELRRSTSDSSSRARESRAYHEAGDEISTQDLDLL
AEYRRLVRQPPPATQRVPGVRRDNDGGGRSAAQNFEEVMLARHLRQMGIL
DPTISRHERRLLRARRGVGGGGGSQAPGRGSQPASAGTVSSLPEEVVDRV
FLDRLPEDGRQCCICLENYCEREVVARLPCLHLYHANCIKSWLSTSSTCP
QCKHSVN*
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mRNA from alignment at H-paniculata_contig5309:1497..9835-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5309.12713.1 ID=mRNA_H-paniculata_contig5309.12713.1|Name=mRNA_H-paniculata_contig5309.12713.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8339bp|location=Sequence derived from alignment at H-paniculata_contig5309:1497..9835- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TATGAAACACGCACTGTCTCATTAGCCCCAGCAAGTCGAGAGCTGATGGT
CACGATGAATTGGAAGTGTGAAAAATGCGGGCGTGAGGTGCGTAACACGA
TTCCATTCCCTCCTTTAACTTTTGCGGGCACATTGTTGATGTTTGAAAGT
ATAGCCCAGCTCAGACATCTAGACATGAAATGTTGACGAACATTTGCTCT
GGCTTGAGTTCATGTTGTACTAGGCTGTTGAAGCAATTGTGATCTAACTG
GAGGTGTAGGTTAGCCAAGTTAAGGGGCTTGATGAACGTATGGCGGACTG
CAGGGAGCCCGACGTTTGGATGTATGTGGTGTGATTTTCTTTTCTCCTAT
TTTTCTTTTGTTTCCTCTTTTCGCGTCGGAGTTGTTCGAGAATGATCAAG
TGCAGTAGTCCATGTTCAGAGTTCCTGACATACCTTGTTAAGTCTTTGTT
CGTCTACCCACCTAAGGACCATCTGAGGTAGCAGCTGCGGCGTCATTCGG
AGGGCATGTAGAGTAGTTTTGAAGTACATTTAATTTTCTGCTGTTCAGCT
TCTGCGGCGGGTAAAAAATGGTGTTGGGTACGCGACACAGCCAGTGCATA
TCTGAACACAAAAATGCCAACCTACCCTTGGTCTATCACAGGTGGGAAAA
TGCCCATGCATGCGCGACGGCACAAATGAGAGCATCAAGGTCGAATATTC
AAACTGACGTCCGATACTTGTATGCGTAGGTGCAGCTTGCACGCCTGCCA
AGATTTGCTATACTTACTACAGTCCTGATATTTTGTGGAAGCCCGCTTTA
CATATCTTAAAATACAGTTAAAAATAAGGCTCTTCGCACTAATCTCACCA
CATGAAATGTTTTTTCAAGGTTTGAGAAGTTGGTTGCTCACCTCAATTTT
CGAATATAATCTCGCGTGAGCCGCGCTGTCCTACGGAGTCTAAAACGTCG
AGAAATGAAGTGCCGGTTTTGAAAATTGGTCGTATTCGGTCTGGCACCGC
AATCATATATAAGGTGGATACTCTGAGGGATTTGCGATAATGATTAGTTA
TAGTCAACCCTTACAGACCAGCGAGCCTGCGTCGTGACAATTCCGACGCG
CGGTTTTTGACAGTCCCGCGTCGAAGGAGAGGGGGGGTGGTTTTTGGCAG
GGGAAGTTACCGAATTTCGATGGACAACATTGCTGTGGCTGGGTTGATAT
CAGACCCGCATGTGGACAAACATGTGACAAACAGCTTGTTGCTGCTAAAC
AACAGGGGGGGAAACTCCTGTGGAAGTATAAGTGGAACCGTCAGAAGAGC
CCAAGAGCCTGTCTCTATCGTTTGTATGGCTTTTCTGTAGTGAAATTGTA
GGTCTCCCACCCTCGACCCAATCAATGCAAGAGGGCTTTTTGGTCCCTGC
TGCAGTAGCAAGTCACCACTCACCTTCGGCAGAAGCATTCTCCGTCAACA
TAGGAAAAACGACATTTGTATATCCTACTTTTTGCCATTTCATTTCTGCG
AAGTACCATGCAACATGGACCGCACTGATTTATCCAGGTACAGAGCGATC
TATCTTGAAATAATTCTGGTATGACCCTCTTGTCTCGGGTAGCGACACCA
GCACACAGAATCAAGATTCGATGTGCAAAAGAAAAGTGTTGCGTTAATCT
AGTCCTTTCCATCGGACCTATGGCAAAGACGCCGCTAGTTGTGGTTGTCG
CGCTTCGGACAAATTCAACATGTGCATCGCTGCCAAAGTGACGGTTCATG
CAGGATGACAGCGAGTACACTTGATACAGTAAAACAGCAATGGCGTGCTT
CGCAGCTTGATTTCGTCGCCACTTTCTCGGCACGAGAACACCATCAACAC
CGAGAGACACGTGTTGCCGGGGTTATGTTGTTTGCCGTGGACCTTGGATG
AGAGTGCAACTCGCTGGGGTTGTCGAGATGTCGAAGATTTCTTACTAGCT
ACGCTAGCCCGAATTAGGTTTTTTTTTTTTTCTTATGAAGAATCCCCATC
TATGAAACCGGAGTCTCTGACTTCCAAATTCGATTCGGGTTTTTAGGACG
GCTTTCATCCTGATAACGCCCTAACATCGCACCAGAGATTGATCCAATCC
TTAACCAAAATGCCGACTCCTATGCCTCAATCATAATAATTTTGTTCTAA
CATTTCAAGCCAATTTCAGTCCACAAAACAATAGTATTTTTTTTAATGCC
CTGTAATTTCATCATTTTTAGTGTTGCGTAACAAAGAGCTGCTTCAAAAG
GAATTTTTAGTTTTTGGACTGAGCTGGTCTAGAGGGCTGTACATAAAGCG
TATTTGATTGAGAGACAATAGTGGGCGATCTAAGTGAATAGTTGAATCAA
AATTTTGTGTGCAAGTTTCGGGAGGTATCGGGGTGACCGCGGTCCCCAAC
AACAAATTCGTAATTTGGAAATTGAAGTTTTGGTCTTGAAAACATTTGCC
ATTCTATTGTAGCTTTCCCTGTATTTTCTGTTCAAAATGGTTCATGTGTT
TTAATGCCGTTTAACACCCCTGAAACTATAAAACGCGCGGCGGAATCGCG
TCCCAATACGTTTCGAGAACCGATGCAGTAAATCCCGGATAGAACCCAGC
CGTAGGAGAGGCTCCACGGCGCGTAATACATGTAAAAAAAATTAACTGCG
AAGAAACAAGTGAAAAGCGGGAATTTTTCCACTTTTTCTAAACGAATAAT
TCCAGGGGTGTTCTCGGTAACGGTATTTGAAAATATTTTATTCGGCGCGG
TAAGCGATTTCCTCGGTATTGTGTTGATAGACGGTATTCGGTATATAAGT
TTCTCGGTATCTTTACGGTACGGTGCGATTTATAGATTTCTCGATATCTT
CGCGGTAAGTGGTATCCGTTTTTTCCCCCGCGGTACGGTACGGTATTTTT
TTGTCGGTATCACGCAGTACGTCATCTGGTATTTTGCACATTCTTCGGTG
GGTGCCTGACCGCCTGGCCCAAGCGGCACAGGATCCAAAAAGCAGTCGTC
AAACCCACGTGTGTGTAGTAAGCGGTATGGATGGGGAATTTCACAAGGAG
GCGACTCGTTTATTCCGAGAACCTTTTCCCACGACTTATGGTTTGTAGTT
TTAAGGCAAAATGCCACAGAACACCACGCAACTCTTGGAGTTGACGACAG
TCACCATCTCGTCCGGTGTGATGAGTATGAGATAGATGTATGTCTATGAC
GCATAATCGCAGGAGAAAAAAAGATGAAAAAATAAAATAAAATAAAATAA
CATTGTTGAAAAGTATTGAAAAATCTTGTTCATAGTAATCTGCGTTACAG
TGGACAATCCTCTGCACTGCTTTCACGAAAAAACCGAGTACTAAACAACT
AATTAAAAACATAGCAAATTTTGCAGAATTTGAACCTCTTACCGACATCT
CCAATCGATACAAAATATTAAAAAAAAACAAAAAAAAACTCGCAATCACA
AATATAATCGAAATTAAAATTCGGCAGGATAGATATCGAACAAATGGGCC
TCACACTCGACGGAGCTCATTTGCTTACACTAACTTTGGCCAAACACACT
AAATTACAATTGCTACTACATTTACTGACACTAACTTTGGCCTAACGCAC
TAAATAAATAAATAATTAATAAATAAGATTGCAACTTCATCTCCAGCTGC
TTTTTCTAGCACCGCCGCAACTTCCTTTGCGGTCTTGGCCGCCTTGGTTG
CTCGCGCATCGACAACCTTGTAGTCACTAACCTCCGGGATAATTTTTCTG
TTCAACATCAGGAAGATCATCTTCTCGACCTTGGAGGAGAGCATAGTCTT
GCGCATGTTGCTGACCAAGAGAACGAGCGCAGAAATTTTGCGCTCCGCCT
GGCAGCTGGTGGACTCAATCCCGTGGGTAGAATCGGGCGATGAGTCCGAG
AGGCGGCAGTTCCGCGTTAGTGACTACCTCGCCCGTTTCCGGGCACTTAG
TGACAGGGCTCCTTCGCCGCCAGTTCTGTAGAAGCGAGACGTCGTCGGTG
TCTAGCACTGGCTCTTCCGCCAAGTACAGCGCCAGCCCGCGTCGAACATG
TGCGGTCCGCGGCGCGCGCGCCGCCGCACCCTCACTACCCTGCATCTCAC
CGCTGCCGCTACCCGCTTGTGCTTTAGCGATGCGCGCTCCAGGCGCCTCT
TCTCTAGCAGGGACGAAGGCTTCCGCGGTGTCTTGGTTGACGGCTCCCCA
GATACGACGTCTCGCTCACCTGACACAGGGGCTGGAGATAGCGAGGACAA
CAGGGTTGGTTCCGGCGTCTCCGACTCAGGGAAGACCATCCCAACCAAAT
ATTCCAATTCTTCTTCTGCGGGAGACCTCATCGTTTGCCCGCCATTTACG
CGCTCTTCTTTTGAGCATGGCTTCCGCCTCAGGTCCAGCAGCACACAAAC
ACGCTTACGTCTACAGTGGCCTTGCCCAGGTTCTTGCTCTCCATCATCTC
CACTGACACCTTCAGCATCTCTTGCGCCCGCGGTGTGAAGTCAACCACCC
CTGTCTCCTCCATCACATGGTGGCCATTCTCAATCCCCGCCTGTGCGGAA
GGGGTGATTCTCCAGGTTGAGCACCTCCACCATTTACTTCATGATGAGGG
TCGTCTGGCTGATGTGCGTGTCCACGGACCCCTGGGTCCCTGTCGTCACC
TCCGAGATGTATCTAGTAGACTGAACACCTCGTTTGTGATTACCTTCTCG
TTCGTGATGACCCTCTCGTTCCTTTTCAGCTTCCGCTGGTTGGTCGGGTG
CTTCTTGAAATGCGCGATGATGGCGATCTTCAGCTGCAGAAGTCGGAGTA
TCGTCTTGTGTTGACTGGTCCACCTGGTTGACAGAGTATGGGTTAGGGGT
AAAAACACAACAAAGGGGAGAGGCAGGAGGACGTGAGAGTTAGGGGCACC
AAAATATGGTTAAAATCGCGCACGAAAGGACGATTCGGCGGGTCGGCCTG
CTCCTTCGTCTTCTGATCCAGCGTCGGGGTTGAAAGACCCGAAAATTTCG
ACTGATGTGGACCTGCCGCTGTCTCTATCGACGAAACCGGTGCTGCACCC
AGAGGAGCAAGGAAATATTGAGGTTGGCAATGTGGGAATACGGCATGACG
AATGAGGAATTGAGGGACAACACAGGCGCGAGTTCAGCGCTCAAGCTGCA
TGTTCAAAGTTGAAAACAGGACACAGAAAACGTGAATATACATTACACGG
TAGAGTATAGCAAAAAAGTGTGCAGATGTATATGATGTGTACGAACTTAG
GGCGAAAGACGAAAGCGCTGACACAGCAATCGAGCAACGATATGTGTGTG
CATTCCAAGCAAGCCAGTAAAATAGTATCCGCTGTACATGGAATATTCAG
CAGCATTGAATACGCCTACTGGTATAAATTGCACCTGATGAATTAAATTT
TTCTCAATCGAACTCTGCAGTCGGCAGCTGTGCTGACTACGGAGAACACA
CAGGCAATGCTATCAGAGCAGGTTGACACTTGCCGATAACCGCGGCTTCA
TCTTCATCCTTATCCTCATCGTCGTCCTCATCCTCATCCTCATCGGACTC
CGTCCTAAGCTGCTGCATCAGGGTCACATACTGCTTATGGTGCTGCTTCC
TGAAGTGGTTGATCATGCATGTTTTTGTCACACCCTTTGAGCACACGTGT
GCTGTGCAGAACACGTTCAGATTCCTGAAGGCGGGTGTAAACTCACGCAT
GACACGCCAAATCCAAGCTGTCTTTATACGTTTCCCAAATGAAGGAGAAG
AATCTTGACCTTGATCGCTGAGCCGCTAGGGGAAGTGAGAGTTGCTGTCT
CGCTGGCAGGGTTGGCAACAACTCGCAAGAAAGCAGGGCCTGCAGCAGCA
GCAGCAGCTAGCGGGCCAGCAATGTTGGCTGCAGAGCTTGCACAACCCCT
AGTTTACGAGGCAGCAGTGACTCCAGAGCCAGCAGCGTTTGCAGAGCTGG
CAGCGGCTGCCGCGCTCACACTACACGTGTGTTTGGCGACCACAACTGAC
CAACGATACACCAAGCGTGCGCCCTAGTCAATAAAGCATAACACGAAGAC
TTTGCGATACACTAACACACCAACGCGGTCAGATCCGCGGCATATTCTTT
GACGAATCCAGTCATCTCAGACTCGCGGTCGTGGAGACTTTTCACGGTAC
GGTAACGGTATGGGAACGCTACGGTAACGGTCGATAGCGAGGTTTCACAG
TACGATACGGTACGGTAAACTGACAAGGGCTCTGATACCGCGGTAAATAT
TTTTTTTCACGTTATCGATACCGAATACCGAATACCGCGGAATACCGTGG
AACATTTACCGAGAACACCTGTGAAAAAATCAGACCACACCTACTTTTGG
GCAAAGGCCACAAAATGTTTTTCCGAATTTTCCAACTCATTTTTTTCATC
ATAACTGATGCAGTTGACGCCACTTTAACCCTAGGGTACCATACAATGCT
CACGTACCCACACCATTCTATACCATCTTGAATATATTCTCACCGACGAC
TTTCGGCCTTTGCCCTCCGCTGCTCACCTTATTTGACATGTGGCCCAATA
CACCACTCTTGCATGTAGGTGCCACTGCGGAACCGCGAGGTACATGCGAG
AAGATGCCAGGGCATCATCGCTCCGCGTCAGCTCGAGTCCCCGCCCCCGC
CTCTACCTCCCTCCCCTCCTCGCCAAGCGCCCGAACCACAGACGCATACC
TTGCCTGGTTCTCCCAATGTCTTCACGCCCAGGCACCAGCAGCGTGCCAC
GGGTGGAAGAGGAGGGGGTAGGGGACGTGCAGGGAGGGAGGCTGCCGTGG
CCATGGCACGGAATGAAGATCCTAGCGGGGCGATGGAGTCATCACCATCA
CAGTGGAAGTGTAGTGCGTGCACCTTCTTGAACGCTCGCGATCTCTTGAG
TTGCGAGATGTGCAGCACGGCTATCCCGGCGGGAGAACGACCGCCGGATG
CCATCTATCGTGACATGTTGATTAGTGACACCCCCGCCGGCAACAACTTC
GGTCTAGACTCGCATTTAGGCTCATCGATAGTGGCGGAATGGATGGCGGC
AATGGAGGAGGAGGAGGAGAGGTTCAGACAGCTGGAACGAAGATACAACC
GAATTGGCCACACGACCCGCGGCGGAGGCAGCGGCGGCCACGGCGCCGGA
GGTGTCGGCGGGGGACCCTCTGTGTCGGATGCTGCGACGGGATCCGCAAT
CGGTGCTGTCGGCGCCGGCCTAATAGCGGCGATGGCCCCCGGAAATCGTA
GGTCATCACGTGTAGTCTCATCTATGTTTCAAGGGGCACTGCTCGGTGGA
GTCGCTGGGGTAACAATAGGACCGGAGCTCAGGCGGAGCACAAGCGACAG
TTCCAGTAGGGCTCGCGAGTCTCGAGCCTACCACGAAGCCGGTGACGAGA
TATCAACGCAAGATTTGGATCTGTTGGCGGAGTATCGGCGACTAGTGAGG
CAACCACCGCCAGCAACGCAGAGAGTGCCAGGTGTTCGTCGTGACAACGA
CGGAGGAGGCCGGAGCGCCGCGCAAAATTTTGAGGAGGTCATGTTGGCAC
GTCACCTGCGGCAAATGGGTATTCTGGATCCGACGATAAGTCGCCACGAG
AGAAGATTGTTGCGGGCAAGAAGAGGTGTTGGCGGTGGTGGTGGCAGTCA
AGCACCGGGTAGGGGTAGTCAGCCTGCGTCTGCGGGGACGGTGTCGAGCC
TTCCTGAGGAAGTTGTGGACAGAGTTTTCCTGGACCGGTTGCCGGAGGAC
GGGCGGCAGTGCTGCATTTGTCTTGAGAATTATTGTGAGCGCGAAGTCGT
CGCGCGCTTGCCGTGCTTGCATCTGTACCACGCGAATTGCATCAAAAGCT
GGCTGTCCACGTCGAGCACGTGTCCGCAATGCAAGCATAGCGTGAATTGA
AAGTGGACATAGACGGCCACAAACGTTTGGGTTGTATTTGGCGCTGTTCT
GGCGCTTTCCTTGTCGCTCCGGGAATCAACGATTATTGAACCAAGACAAC
ATGACTATGGTCTAAGATTCTTCCGGTACTACAGTAGTGGGACGTGTTTT
CTAGGTTAATGTATCTATTTTGTGTGTAAACCGGATTGTAGTAGTAGCCA
CGGTAGTTGCCTGGCGTTTGGCTGTGAAGGTGGAGCACTTGGCATGCCCG
CCTAGGCGGCCGATGGCTGTGCACCAGAGTAGACATTGTGCAGTAGCTCT
CTGCTGCGGGTGGATTCTCAAGTACCCTAGGTTGTGGCGACTCCAGAAAG
ATCGGCGGTGTGCAACATTTTGTATTTATCCGATGGCGATATTGATTAGG
GAGTACGATGTTCTTGTGTTCGTTCGCTGTGTAGGGGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig5309:1497..9835-

>mRNA_H-paniculata_contig5309.12713.1 ID=mRNA_H-paniculata_contig5309.12713.1|Name=mRNA_H-paniculata_contig5309.12713.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2748bp|location=Sequence derived from alignment at H-paniculata_contig5309:1497..9835- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCACGATGAATTGGAAGTGTGAAAAATGCGGGCGTGAGATGGTCAC
GATGAATTGGAAGTGTGAAAAATGCGGGCGTGAGGTGCCACTGCGGAACC
GCGAGGTACATGCGAGAAGATGCCAGGGCATCATCGCTCCGCGTCAGCTC
GAGTCCCCGCCCCCGCCTCTACCTCCCTCCCCTCCTCGCCAAGCGCCCGA
ACCACAGACGCATACCTTGCCTGGTTCTCCCAATGTCTTCACGCCCAGGC
ACCAGCAGCGTGCCACGGGTGGAAGAGGAGGGGGTAGGGGACGTGCAGGG
AGGGAGGCTGCCGTGGCCATGGCACGGAATGAAGATCCTAGCGGGGCGAT
GGAGTCATCACCATCACAGTGGAAGTGTAGTGCGTGCACCTTCTTGAACG
CTCGCGATCTCTTGAGTTGCGAGATGTGCAGCACGGCTATCCCGGCGGGA
GAACGACCGCCGGATGCCATCTATCGTGACATGTTGATTAGTGACACCCC
CGCCGGCAACAACTTCGGTCTAGACTCGCATTTAGGCTCATCGATAGTGG
CGGAATGGATGGCGGCAATGGAGGAGGAGGAGGAGAGGTTCAGACAGCTG
GAACGAAGATACAACCGAATTGGCCACACGACCCGCGGCGGAGGCAGCGG
CGGCCACGGCGCCGGAGGTGTCGGCGGGGGACCCTCTGTGTCGGATGCTG
CGACGGGATCCGCAATCGGTGCTGTCGGCGCCGGCCTAATAGCGGCGATG
GCCCCCGGAAATCGTAGGTCATCACGTGTAGTCTCATCTATGTTTCAAGG
GGCACTGCTCGGTGGAGTCGCTGGGGTAACAATAGGACCGGAGCTCAGGC
GGAGCACAAGCGACAGTTCCAGTAGGGCTCGCGAGTCTCGAGCCTACCAC
GAAGCCGGTGACGAGATATCAACGCAAGATTTGGATCTGTTGGCGGAGTA
TCGGCGACTAGTGAGGCAACCACCGCCAGCAACGCAGAGAGTGCCAGGTG
TTCGTCGTGACAACGACGGAGGAGGCCGGAGCGCCGCGCAAAATTTTGAG
GAGGTCATGTTGGCACGTCACCTGCGGCAAATGGGTATTCTGGATCCGAC
GATAAGTCGCCACGAGAGAAGATTGTTGCGGGCAAGAAGAGGTGTTGGCG
GTGGTGGTGGCAGTCAAGCACCGGGTAGGGGTAGTCAGCCTGCGTCTGCG
GGGACGGTGTCGAGCCTTCCTGAGGAAGTTGTGGACAGAGTTTTCCTGGA
CCGGTTGCCGGAGGACGGGCGGCAGTGCTGCATTTGTCTTGAGAATTATT
GTGAGCGCGAAGTCGTCGCGCGCTTGCCGTGCTTGCATCTGTACCACGCG
AATTGCATCAAAAGCTGGCTGTCCACGTCGAGCACGTGTCCGCAATGCAA
GCATAGCGTGAATTGAGTGCCACTGCGGAACCGCGAGGTACATGCGAGAA
GATGCCAGGGCATCATCGCTCCGCGTCAGCTCGAGTCCCCGCCCCCGCCT
CTACCTCCCTCCCCTCCTCGCCAAGCGCCCGAACCACAGACGCATACCTT
GCCTGGTTCTCCCAATGTCTTCACGCCCAGGCACCAGCAGCGTGCCACGG
GTGGAAGAGGAGGGGGTAGGGGACGTGCAGGGAGGGAGGCTGCCGTGGCC
ATGGCACGGAATGAAGATCCTAGCGGGGCGATGGAGTCATCACCATCACA
GTGGAAGTGTAGTGCGTGCACCTTCTTGAACGCTCGCGATCTCTTGAGTT
GCGAGATGTGCAGCACGGCTATCCCGGCGGGAGAACGACCGCCGGATGCC
ATCTATCGTGACATGTTGATTAGTGACACCCCCGCCGGCAACAACTTCGG
TCTAGACTCGCATTTAGGCTCATCGATAGTGGCGGAATGGATGGCGGCAA
TGGAGGAGGAGGAGGAGAGGTTCAGACAGCTGGAACGAAGATACAACCGA
ATTGGCCACACGACCCGCGGCGGAGGCAGCGGCGGCCACGGCGCCGGAGG
TGTCGGCGGGGGACCCTCTGTGTCGGATGCTGCGACGGGATCCGCAATCG
GTGCTGTCGGCGCCGGCCTAATAGCGGCGATGGCCCCCGGAAATCGTAGG
TCATCACGTGTAGTCTCATCTATGTTTCAAGGGGCACTGCTCGGTGGAGT
CGCTGGGGTAACAATAGGACCGGAGCTCAGGCGGAGCACAAGCGACAGTT
CCAGTAGGGCTCGCGAGTCTCGAGCCTACCACGAAGCCGGTGACGAGATA
TCAACGCAAGATTTGGATCTGTTGGCGGAGTATCGGCGACTAGTGAGGCA
ACCACCGCCAGCAACGCAGAGAGTGCCAGGTGTTCGTCGTGACAACGACG
GAGGAGGCCGGAGCGCCGCGCAAAATTTTGAGGAGGTCATGTTGGCACGT
CACCTGCGGCAAATGGGTATTCTGGATCCGACGATAAGTCGCCACGAGAG
AAGATTGTTGCGGGCAAGAAGAGGTGTTGGCGGTGGTGGTGGCAGTCAAG
CACCGGGTAGGGGTAGTCAGCCTGCGTCTGCGGGGACGGTGTCGAGCCTT
CCTGAGGAAGTTGTGGACAGAGTTTTCCTGGACCGGTTGCCGGAGGACGG
GCGGCAGTGCTGCATTTGTCTTGAGAATTATTGTGAGCGCGAAGTCGTCG
CGCGCTTGCCGTGCTTGCATCTGTACCACGCGAATTGCATCAAAAGCTGG
CTGTCCACGTCGAGCACGTGTCCGCAATGCAAGCATAGCGTGAATTGA
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