mRNA_H-paniculata_contig5308.12711.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5308.12711.1 vs. uniprot
Match: A0A6H5KFN7_9PHAE (Protein-S-isoprenylcysteine O-methyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN7_9PHAE) HSP 1 Score: 412 bits (1058), Expect = 2.630e-142 Identity = 203/278 (73.02%), Postives = 234/278 (84.17%), Query Frame = 3
Query: 33 MLDAIQKTLDFEGYRNPQFNRSDGLGRVGVAGFVTGLVFGIHLSILGCCVLINGLVLSRLVQWSLYACSVSFFHSSEFFVTAVFKPDVVSYNCEYYVMFLFLRWYNYYKTFVLNHSKEYTAALLSSWVEFWLEAALLPFVKRQPVVVAVGAFLAVMGHFFRVGAMCTAGSNFNHEIMQRREQNHQLITHGVYRFLRHPSYFGWFWWSLGTQLLLCNPICLLVYVAAASVFFRRRIPYEETLLELFYPDQYPAYVQRTFVGIPFVRSRSSRQK--GGTT 860
ML++IQ+ L+F+G NPQF+ SDGLG+VGVAGF+TGLVFG+HLSI GCC+ INGLVLSRL+QWSLY+CS+SFFH SEFFVTAVFKPD+VSYN +FVLNHSKEYT ALL+SW EF LEA LLP +KRQP VVA G LA++GH+FRVGAM TAGSNFNHEIMQRREQ+HQL+T GVYRFLRHPSYFGWFWWSLGTQL+LCNP+C LVYV AAS FFRRRIPYEE LLE FYP+QYPAYV+RTFVGIPFV +RS+R + GG++
Sbjct: 1 MLNSIQRLLNFDGCTNPQFSSSDGLGQVGVAGFLTGLVFGVHLSIAGCCLTINGLVLSRLLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYN-----------------SFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREQSHQLVTRGVYRFLRHPSYFGWFWWSLGTQLVLCNPLCFLVYVVAASSFFRRRIPYEEALLESFYPEQYPAYVRRTFVGIPFVPNRSNRGRNSGGSS 261
BLAST of mRNA_H-paniculata_contig5308.12711.1 vs. uniprot
Match: D7G1X4_ECTSI (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X4_ECTSI) HSP 1 Score: 310 bits (795), Expect = 3.000e-103 Identity = 152/211 (72.04%), Postives = 175/211 (82.94%), Query Frame = 3
Query: 33 MLDAIQKTLDFEGYRNPQFNRSDGLGRVGVAGFVTGLVFGIHLSILGCCVLINGLVLSRLVQWSLYACSVSFFHSSEFFVTAVFKPDVVSYNCEYYVMFLFLRWYNYYKTFVLNHSKEYTAALLSSWVEFWLEAALLPFVKRQPVVVAVGAFLAVMGHFFRVGAMCTAGSNFNHEIMQRREQNHQLITHGVYRFLRHPSYFGWFWWSLGTQ 665
ML++IQ+ L+F+G NPQF+ DGLG+VGVAGF+TGLVFG+HLSI GCC+ INGLVLSRL+QWSLY+CS+SFFH SEFFVTAVFKPD+VSYN +FVLNHSKEYT ALL+SW EF LEA LLP +KRQP VVA G LA++GH+FRVGAM TAGSNFNHEIMQRRE++HQL+T GVYRFLRHPSYFGWFWWSLGTQ
Sbjct: 1 MLNSIQRLLNFDGCTNPQFSSPDGLGQVGVAGFLTGLVFGVHLSIAGCCLAINGLVLSRLLQWSLYSCSLSFFHFSEFFVTAVFKPDIVSYN-----------------SFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 194
BLAST of mRNA_H-paniculata_contig5308.12711.1 vs. uniprot
Match: A0A7S2SR19_9STRA (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR19_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.710e-77 Identity = 127/282 (45.04%), Postives = 174/282 (61.70%), Query Frame = 3
Query: 24 GVTMLDAIQKTLDFEGYRNPQFNRSDGLGRVGVAGFVTGLVFGIHLSILGCCVLINGLVLSR--LVQWSLYACSVSFFHSSEFFVTAVFKPDVVSYNCEYYVMFLFLRWYNYYKTFVLNHSKEYTAALLSSWVEFWLEAALLPFVKRQPVVVAVGAFLAVMGHFFRVGAMCTAGSNFNHEIMQRREQNHQLITHGVYRFLRHPSYFGWFWWSLGTQLLLCNPICLLVYVAAASVFFRRRIPYEETLLELFYPDQYPAYVQRTFVGIPFVRSRSSRQKGGTTR 863
G+ +++ IQ L+F+G+ +PQF S G+GR+GVAGF G++ G+H+ C + +N + L QW LY ++ FH +EFF TA+FKP VVSY+ +FV+NHS YT A+++S EFW+E + K QPVV +G L +G FFR AM TA +FNH I++ H+LITHGVYR RHPSYFGWFWW +GTQ+LLCNPI L+Y AA FF+ R+PYEE L + ++Y Y QRT V IPFV+ Q+ G+ +
Sbjct: 3 GLLLVNRIQSVLNFDGWESPQFKSSAGVGRIGVAGFGLGIIVGVHV----CLLAVNPWIWRSWPLAQWGLYVTCIAVFHFTEFFTTAMFKPTVVSYD-----------------SFVINHSTAYTMAVIASAAEFWVEFLVFGHRKFQPVVFVLGLGLIAIGQFFRSAAMWTARESFNHLIVEHLAPEHRLITHGVYRIFRHPSYFGWFWWCVGTQVLLCNPIVALLYAGAAWNFFQTRVPYEEATLLRLFGEEYKLYAQRTPVAIPFVKPLVPVQRRGSAQ 263
BLAST of mRNA_H-paniculata_contig5308.12711.1 vs. uniprot
Match: A0A067CQM9_SAPPC (Protein-S-isoprenylcysteine O-methyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQM9_SAPPC) HSP 1 Score: 237 bits (604), Expect = 3.490e-74 Identity = 120/250 (48.00%), Postives = 159/250 (63.60%), Query Frame = 3
Query: 84 QFNRSDGLGRVGVAGFVTGLVFGIHLSILGCCVLINGL---VLSRLVQWSLYACSVSFFHSSEFFVTAVFKPDVVSYNCEYYVMFLFLRWYNYYKTFVLNHSKEYTAALLSSWVEFWLEAALLPFVKRQPVVVAVGAFLAVMGHFFRVGAMCTAGSNFNHEIMQRREQNHQLITHGVYRFLRHPSYFGWFWWSLGTQLLLCNPICLLVYVAAASVFFRRRIPYEETLLELFYPDQYPAYVQRTFVGIPFV 824
QF GLG+V VA F G V +HL +L VL + +QW++Y ++FFH SEF TA FKP VS Y++F+LNHS Y AL +SWVE+W+EA P K +P+ + +G L VMG FFRVGAM TA SNF+H I + ++H+LITHG+Y ++RHPSYFGWF+WS+G+Q+ LCNP+C + Y AA+ FF+ RIPYEE +L F+P+QYPAY RT G+PFV
Sbjct: 5 QFTSDVGLGKVAVAAFGIGFVMAVHLCLLFYVVLATDAGWTYHNATLQWAVYMVCLTFFHFSEFISTAAFKPGFVS-----------------YESFLLNHSDAYQVALFTSWVEYWVEAYFFPDAKFRPLFMWLGLLLVVMGQFFRVGAMWTAKSNFSHRIEIAKRKDHELITHGLYTYIRHPSYFGWFYWSIGSQVFLCNPLCTIAYTAASWSFFKDRIPYEEEILLDFFPEQYPAYKARTISGVPFV 237
BLAST of mRNA_H-paniculata_contig5308.12711.1 vs. uniprot
Match: A0A1V9YAN0_9STRA (Protein-S-isoprenylcysteine O-methyltransferase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YAN0_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.400e-73 Identity = 122/250 (48.80%), Postives = 155/250 (62.00%), Query Frame = 3
Query: 84 QFNRSDGLGRVGVAGFVTGLVFGIHLSILGCCVLINGLVLS---RLVQWSLYACSVSFFHSSEFFVTAVFKPDVVSYNCEYYVMFLFLRWYNYYKTFVLNHSKEYTAALLSSWVEFWLEAALLPFVKRQPVVVAVGAFLAVMGHFFRVGAMCTAGSNFNHEIMQRREQNHQLITHGVYRFLRHPSYFGWFWWSLGTQLLLCNPICLLVYVAAASVFFRRRIPYEETLLELFYPDQYPAYVQRTFVGIPFV 824
QF GLG+V VA F G V +HL +L VL + ++QWS+Y ++FFH SEF TA FKP VS Y++F+LNHS Y AL +SW E+WLEA P K P + G L VMG FFRVGAM TA SNF+H I + ++HQLITHG+Y ++RHPSYFGWF+WS+G+Q+ LCNP+C L Y AA+ FF+ RIPYEE +L F+PD+YP Y RT G+PFV
Sbjct: 5 QFTSDVGLGKVAVAAFGIGFVMAVHLCLLFWVVLATDASWTYHNAILQWSVYMVCLTFFHFSEFISTAAFKPGYVS-----------------YESFLLNHSDAYQMALFTSWAEYWLEAYFFPASKFSPFFMWAGLGLIVMGQFFRVGAMWTAKSNFSHRIEIAKRKDHQLITHGLYTYIRHPSYFGWFYWSIGSQVFLCNPLCTLAYTAASWSFFKDRIPYEEEILLDFFPDEYPQYKARTISGVPFV 237
BLAST of mRNA_H-paniculata_contig5308.12711.1 vs. uniprot
Match: A0A024U7K8_9STRA (Protein-S-isoprenylcysteine O-methyltransferase n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7K8_9STRA) HSP 1 Score: 232 bits (592), Expect = 2.200e-72 Identity = 121/249 (48.59%), Postives = 153/249 (61.45%), Query Frame = 3
Query: 84 QFNRSDGLGRVGVAGFVTGLVFGIHLSIL--GCCVLINGLVLSRLVQWSLYACSVSFFHSSEFFVTAVFKPDVVSYNCEYYVMFLFLRWYNYYKTFVLNHSKEYTAALLSSWVEFWLEAALLPFVKRQPVVVAVGAFLAVMGHFFRVGAMCTAGSNFNHEIMQRREQNHQLITHGVYRFLRHPSYFGWFWWSLGTQLLLCNPICLLVYVAAASVFFRRRIPYEETLLELFYPDQYPAYVQRTFVGIPFV 824
QF GLG+V VAGF G V +H+ + C + + ++QWSLY ++FFH SEF TA FKP VS Y++F+LNHS Y AL + VEFWLE+ P K V +G FL VMG FRVGAM TA SNF+H I + + H L+THGVY+++RHPSYFGWF+WS+G+Q+ LCNP+C + Y AA+ FF+ RIPYEE LL F+P QYP Y RTF GIPFV
Sbjct: 5 QFTSDVGLGKVAVAGFGLGFVMALHICLFVWACWWTDDWVYRHAVIQWSLYVVCLAFFHFSEFISTAAFKPGFVS-----------------YESFLLNHSDAYHLALAAGCVEFWLESYFFPERKYLHQVATIGLFLIVMGASFRVGAMWTAKSNFSHRIEVAKRKEHTLVTHGVYKYIRHPSYFGWFYWSIGSQVFLCNPVCTVAYTAASWSFFKDRIPYEEELLHEFFPTQYPPYKARTFSGIPFV 236
BLAST of mRNA_H-paniculata_contig5308.12711.1 vs. uniprot
Match: W7UAK7_9STRA (Protein-S-isoprenylcysteine O-methyltransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UAK7_9STRA) HSP 1 Score: 233 bits (593), Expect = 2.680e-72 Identity = 122/273 (44.69%), Postives = 170/273 (62.27%), Query Frame = 3
Query: 36 LDAIQKTLDFE---GYRNPQFNRSDGLGRVGVAGFVTGLVFGIHLSILGCCVLINGLVLSRLVQWSLYACSVSFFHSSEFFVTAVFKPDVVSYNCEYYVMFLFLRWYNYYKTFVLNHSKEYTAALLSSWVEFWLEAALLPFVKRQPVVVAVGAFLAVMGHFFRVG-------AMCTAGSNFNHEIMQRREQNHQLITHGVYRFLRHPSYFGWFWWSLGTQLLLCNPICLLVYVAAASVFFRRRIPYEETLLELFYPDQYPAYVQRTFVGIPFV 824
+D +QK LDF NP F+ + G+GR+G+AGF+ G ++G HL + +L N L LV+WS Y S+ FH EF TA++KP+ V+Y+ ++++NHSKEYT A L++W EFWLE P +K G+F ++G F VG AM TA +F+H IM+ R+++HQL+THG+YRFLRHPSY GWFWW +GTQ+LLCNP+C L+Y + FF RI YEE L+ FYP +YP+Y ++T VGIPF+
Sbjct: 4 IDRLQKCLDFNFPAAAANPAFHTNRGVGRIGLAGFLLGGLWGAHLVLFFAALLGNDNKL-WLVRWSAYMVSLFCFHFMEFLSTALYKPESVTYD-----------------SYMINHSKEYTVAALAAWAEFWLELWFFPDLKIS------GSFTCLLGLLFLVGGQACRIVAMHTARGHFSHTIMETRQKDHQLVTHGIYRFLRHPSYCGWFWWVVGTQILLCNPLCALIYALVSWRFFAARIKYEEGTLKTFYPQEYPSYCRQTVVGIPFI 252
BLAST of mRNA_H-paniculata_contig5308.12711.1 vs. uniprot
Match: A0A7S2Y1W5_9STRA (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1W5_9STRA) HSP 1 Score: 233 bits (593), Expect = 3.800e-72 Identity = 125/282 (44.33%), Postives = 170/282 (60.28%), Query Frame = 3
Query: 57 LDFEGYR--NPQFNRSDGLGRVGVAGFVTGLVFGIHLSILGCCVLINGLVLSRLVQWSLYACSVSFFHSSEFFVTAVFKPDVVSYNCEYYVMFLFLRWYNYYKTFVLNHSKEYTAALLSSWVEFWLEAALLPFVKRQP------------------------VVVAVGAFLAVMGHFFRVGAMCTAGSNFNHEIMQRREQNHQLITHGVYRFLRHPSYFGWFWWSLGTQLLLCNPICLLVYVAAASVFFRRRIPYEETLLELFYPDQYPAYVQRTFVGIPFV 824
LDF+ ++ N +N +G GR GVAGF+ GL+ G HL +L C ++ + +V W LY S++ FH EFFVT++F P +SY+ F++NHSKEYT A ++SW+EFW+E P +K ++ +G L ++G R GAM TAGSNFNH I ++E+ HQL+THG+YR+LRHPSYFGWFWWS+G Q+LL NP+C L Y AA+ FF RRIP+EE LE F+PD YPAY +RT +GIPF+
Sbjct: 3 LDFQYFQQDNIAYNTRNGPGRFGVAGFLIGLLLGFHLCLLVCNLIYDPSF--PVVIWCLYFTSLAGFHFGEFFVTSIFNPWSLSYDA-----------------FIINHSKEYTVAAIASWIEFWVERFTFPGLKLAGFQLGAGXXXXXXXXEATWWMYGACILSGLGLVLVLVGQACRSGAMWTAGSNFNHVIATKKEKEHQLVTHGLYRYLRHPSYFGWFWWSIGLQVLLLNPVCTLAYAAASWRFFSRRIPFEEGQLEKFFPD-YPAYKRRTIIGIPFI 264
BLAST of mRNA_H-paniculata_contig5308.12711.1 vs. uniprot
Match: W4FUZ1_9STRA (Protein-S-isoprenylcysteine O-methyltransferase n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FUZ1_9STRA) HSP 1 Score: 230 bits (587), Expect = 1.330e-71 Identity = 122/251 (48.61%), Postives = 160/251 (63.75%), Query Frame = 3
Query: 84 QFNRSDGLGRVGVAGFVTGLVFGIHLSI-LGCCVLING---LVLSRLVQWSLYACSVSFFHSSEFFVTAVFKPDVVSYNCEYYVMFLFLRWYNYYKTFVLNHSKEYTAALLSSWVEFWLEAALLPFVKRQPVVVAVGAFLAVMGHFFRVGAMCTAGSNFNHEIMQRREQNHQLITHGVYRFLRHPSYFGWFWWSLGTQLLLCNPICLLVYVAAASVFFRRRIPYEETLLELFYPDQYPAYVQRTFVGIPFV 824
QF GLG+V +AGF G V +H+ + + L +G + + ++QWSLY ++FFH SEF TA FKP VS Y++F+LNHS Y AL + VEFWLE+ P +K V +VG FL V+G FRVGAM TA SNF+H I + ++H L+THGVY+++RHPSYFGWF+WS+G+Q+ LCNP+C L Y AA+ FF+ RIPYEE LL F+P +YPAY RTF GIPFV
Sbjct: 5 QFTSDVGLGKVAIAGFGLGFVMALHVCLFIWAYFLTDGDTWVYRNAVIQWSLYVVCLTFFHFSEFISTAAFKPGFVS-----------------YESFLLNHSDAYHMALAAGCVEFWLESHFFPELKYIHDVSSVGLFLIVLGASFRVGAMWTAKSNFSHRIEVAKRKDHTLVTHGVYKYIRHPSYFGWFYWSIGSQVFLCNPLCTLAYAAASWSFFKDRIPYEEELLLEFFPAEYPAYKARTFSGIPFV 238
BLAST of mRNA_H-paniculata_contig5308.12711.1 vs. uniprot
Match: A0A6G0XJW4_9STRA (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJW4_9STRA) HSP 1 Score: 228 bits (580), Expect = 1.470e-70 Identity = 121/250 (48.40%), Postives = 156/250 (62.40%), Query Frame = 3
Query: 84 QFNRSDGLGRVGVAGFVTGLVFGIHLSI-LGCCVLING--LVLSRLVQWSLYACSVSFFHSSEFFVTAVFKPDVVSYNCEYYVMFLFLRWYNYYKTFVLNHSKEYTAALLSSWVEFWLEAALLPFVKRQPVVVAVGAFLAVMGHFFRVGAMCTAGSNFNHEIMQRREQNHQLITHGVYRFLRHPSYFGWFWWSLGTQLLLCNPICLLVYVAAASVFFRRRIPYEETLLELFYPDQYPAYVQRTFVGIPFV 824
QF GLG+V VAGF G V H+ + + L++G + ++QWS+Y ++FFH SEF TA FKP VS Y++F+LNHS+ Y AL + VEFWLE+ P K Q V G FL +MG FRVGAM TA SNF+H I + ++H L+THGVY ++RHPSYFGWF+WS+G+Q+ LCNP+C L Y AA+ FFR RIPYEE LL F+P++YP Y RT GIPFV
Sbjct: 5 QFTSDVGLGKVAVAGFGLGFVMAFHVCLYIWAYWLVDGGWEYRNAVIQWSIYIVCLTFFHFSEFISTAAFKPGFVS-----------------YESFLLNHSEAYHIALAAGCVEFWLESYFFPDGKYQHAVAGFGLFLILMGASFRVGAMWTAKSNFSHRIEVAKRKDHTLVTHGVYTYIRHPSYFGWFYWSIGSQVFLCNPLCALAYTAASWSFFRDRIPYEEELLLEFFPEEYPKYKARTISGIPFV 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5308.12711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5308.12711.1 >prot_H-paniculata_contig5308.12711.1 ID=prot_H-paniculata_contig5308.12711.1|Name=mRNA_H-paniculata_contig5308.12711.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=306bp MLDAIQKTLDFEGYRNPQFNRSDGLGRVGVAGFVTGLVFGIHLSILGCCVback to top mRNA from alignment at H-paniculata_contig5308:2666..8323- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5308.12711.1 ID=mRNA_H-paniculata_contig5308.12711.1|Name=mRNA_H-paniculata_contig5308.12711.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5658bp|location=Sequence derived from alignment at H-paniculata_contig5308:2666..8323- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5308:2666..8323- >mRNA_H-paniculata_contig5308.12711.1 ID=mRNA_H-paniculata_contig5308.12711.1|Name=mRNA_H-paniculata_contig5308.12711.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1836bp|location=Sequence derived from alignment at H-paniculata_contig5308:2666..8323- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |