prot_H-paniculata_contig5306.12709.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5306.12709.1
Unique Nameprot_H-paniculata_contig5306.12709.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length595
Homology
BLAST of mRNA_H-paniculata_contig5306.12709.1 vs. uniprot
Match: D7FVV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV0_ECTSI)

HSP 1 Score: 501 bits (1289), Expect = 5.030e-162
Identity = 315/663 (47.51%), Postives = 389/663 (58.67%), Query Frame = 0
Query:    1 QVLSDQLYERLETVLKAHGLGHFSDQSEAEQITLLEEAHRELMLEENTVYQAFEAQFSKSMDAEIAKEARGRLRQNREQTLDVTNEALYLESILQTAAEGAVSLLHELPREYLGSLRLMLNQSIPSRMRLDVWRLLLKHTVREEYELMMKKNRNITISGQDVYITHRSQVTLLESGRVADSHLLPFTSKNVILVKTVLSYYHACKMTKPGDKATATIPDCLFHFLIPLCAVVT-RGEF--VPVGGGLTGCSERTTTAASKAEKMDLTIAELVEMFQAALEAGLKNFVD----PTDTHLQRNGGGRYDGNSGEGSA-TPEHDKYPSGHSSLTGGGKERGVTSKPPGWVDVVYGVLVPGLQGLVDRITRVHLGLASTSSTPR-------RRPDAHLNGADKNTLALVATEEFNAQHTGESIR---------------------SSITRRRSTKHDDLHSSGLFP-------------------------------VNPDQARSALWALLHPIVSVGLVGHLGAEACLFAWDQAVIGGFEVMLPRITAMLLVAAGDKLEACGTFSTMSDAFLSHVHLVSTCQLQELMEKYCMSSIREEMRIGEKLAPKIVGPTLEAATQILEKAYSQQTRLEQGARKAHVEHFLSAPPSSSAPQYQ-RENLRLKLS 595
            +VLSDQL+ER+ TVLK+HGLGHFSD S  EQITLLEEAHR++M E N VYQAFE+QFSKSMDAEIAKEAR R+ Q+     + T EA YL+ IL +AAEGAVSLL ELPRE+LGSLRLMLNQ++PSR RLD+WRLLLKHT                               LLESG VA   +LP +S+NV+L+KTVLSY+HACKMTK G KAT  IP+   HFL+PLCAV+T R  +                   + + +++D+ I  LVEMF+ ALEAGL+  VD    P  T +  +G G       + SA +P+     +     +G G+        P WVD  YGVLVPG +GL+D +TRVHLGLA  +           +  D  +N AD ++ A+  T   NA   G+  +                     SS T RR+        S   P                               V   QAR ALWALL P+V+VGLVGHLGA+ACLFAWDQAVI GF VMLPR+ AM++ AA DKL AC TF+ MS+A  SH HLVST QLQELME +CM SIR+EMR+  KL P+I GPTL+ AT IL+ AYS++TR  Q ARKAHVEH L      S  + Q +E ++L LS
Sbjct:   68 EVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQDSTANREGTEEAQYLDRILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSRARLDIWRLLLKHTA-----------------------------VLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKATTNIPEPFVHFLVPLCAVITGRSSYSXXXXXXXXXXXXXXXXXXSLREQEIDIMIERLVEMFEGALEAGLEGLVDQKELPGGTGVSGSGAGGVSTTRAKKSARSPKTATRAAETKENSGDGRGGADNIVLPDWVDKSYGVLVPGFRGLLDHVTRVHLGLAVAAVPSEGNKGDNGKTGDGRINTADGSSSAVGETGASNAATDGQQQQPQENQQRGQDSATQPTSPRRTSSATSRRAALLSQGQPSSEAPSLXXXXXXXXXXXXXXXXXXXXXXXXXXLPEVTESQARVALWALLEPLVTVGLVGHLGADACLFAWDQAVIAGFGVMLPRVAAMVVAAAADKLGACLTFAVMSEALFSHAHLVSTSQLQELMEAHCMPSIRKEMRVSHKLCPEITGPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHRSQTKERIQLDLS 701          
BLAST of mRNA_H-paniculata_contig5306.12709.1 vs. uniprot
Match: A0A6H5KX11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX11_9PHAE)

HSP 1 Score: 476 bits (1225), Expect = 2.120e-152
Identity = 298/663 (44.95%), Postives = 375/663 (56.56%), Query Frame = 0
Query:    1 QVLSDQLYERLETVLKAHGLGHFSDQSEAEQITLLEEAHRELMLEENTVYQAFEAQFSKSMDAEIAKEARGRLRQNREQTLDVTNEALYLESILQTAAEGAVSLLHELPREYLGSLRLMLNQSIPSRMRLDVWRLLLKHTVREEYELMMKKNRNITISGQDVYITHRSQVTLLESGRVADSHLLPFTSKNVILVKTVLSYYHACKMTKPGDKATATIPDCLFHFLIPLCAVVTRGEFVPVGGGLTGCSERTTTA---ASKAEKMDLTIAELVEMFQAALEAGLKNFVDPTD----THLQRNGGGRYDGNSGEGSATPEHDKYPSGHSSLTGGGKERGVTSKP-PGWVDVVYGVLVPGLQGLVDRITRVHLGLASTSSTPR-------RRPDAHLNGADKNTLAL----------------------------------------------------VATEEFNAQHTGESIRSSITRRRSTKHDDLHSSGLFPVNPDQARSALWALLHPIVSVGLVGHLGAEACLFAWDQAVIGGFEVMLPRITAMLLVAAGDKLEACGTFSTMSDAFLSHVHLVSTCQLQELMEKYCMSSIREEMRIGEKLAPKIVGPTLEAATQILEKAYSQQTRLEQGARKAHVEHFLSAPPSSSAPQYQ-RENLRLKLS 595
            +VLSDQL+ER+ TVLK+HGLGHFSD S  EQITLLEEAHR++M E N VYQAFE+QFSKSMDAEIAKEAR R+ Q+     + T EA YL+ IL +AAEGAVSLL ELPRE+LGSLRLMLNQ++PS+ RLD+WRLLLKHT                               LLESG VA   +LP +S+NV+L+KTVLSY+HACKMTK G KATA IP+   HFL+PLCAV+T                        + + +++D+ I  LVEMF+ ALEAGL+  VDP +    T                              +    G    G  +   P WV+  YGVLVPG +GL+D + RVHLGL   ++          +  D  +N AD ++ A+                                                     ++E  +     + +    + R          + L  V   QAR ALWALL P+V++GLVGHLGA+ACLFAWDQAVI GF VMLPR+ AM++ AA DKLEAC TF+ MS+A LSH HLVST QLQELME +CM  IR+EMR+  KL P+I+GPTL+ AT IL+ AYS++TR  Q ARKAHVEH L      S  + Q +E ++L LS
Sbjct:  140 EVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQDSAANREGTEEAQYLDHILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSKARLDIWRLLLKHTA-----------------------------VLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKATANIPESFLHFLVPLCAVITTKSXXXXXXXXXXXXXXXXXXXXXSLREQEIDVMIERLVEMFEGALEAGLEGLVDPKELSGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKENSGDGRGGADNIVLPDWVNKSYGVLVPGFRGLLDHVARVHLGLTVAAAPSEGNKGDNGKTGDGRVNTADSSSSAVGESGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALLPQGQPSSEAPSLGKGADGVDMPSSSRTXXXXXXXXXAPLPEVTESQARVALWALLEPLVTMGLVGHLGADACLFAWDQAVIAGFGVMLPRVAAMVVAAAADKLEACLTFAVMSEALLSHAHLVSTPQLQELMEAHCMPLIRKEMRVSHKLCPEIIGPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHRSQTKERIQLDLS 773          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5306.12709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVV0_ECTSI5.030e-16247.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KX11_9PHAE2.120e-15244.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 587..595

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5306contigH-paniculata_contig5306:8416..13411 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5306.12709.1mRNA_H-paniculata_contig5306.12709.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5306 8416..13411 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5306.12709.1 ID=prot_H-paniculata_contig5306.12709.1|Name=mRNA_H-paniculata_contig5306.12709.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=595bp
QVLSDQLYERLETVLKAHGLGHFSDQSEAEQITLLEEAHRELMLEENTVY
QAFEAQFSKSMDAEIAKEARGRLRQNREQTLDVTNEALYLESILQTAAEG
AVSLLHELPREYLGSLRLMLNQSIPSRMRLDVWRLLLKHTVREEYELMMK
KNRNITISGQDVYITHRSQVTLLESGRVADSHLLPFTSKNVILVKTVLSY
YHACKMTKPGDKATATIPDCLFHFLIPLCAVVTRGEFVPVGGGLTGCSER
TTTAASKAEKMDLTIAELVEMFQAALEAGLKNFVDPTDTHLQRNGGGRYD
GNSGEGSATPEHDKYPSGHSSLTGGGKERGVTSKPPGWVDVVYGVLVPGL
QGLVDRITRVHLGLASTSSTPRRRPDAHLNGADKNTLALVATEEFNAQHT
GESIRSSITRRRSTKHDDLHSSGLFPVNPDQARSALWALLHPIVSVGLVG
HLGAEACLFAWDQAVIGGFEVMLPRITAMLLVAAGDKLEACGTFSTMSDA
FLSHVHLVSTCQLQELMEKYCMSSIREEMRIGEKLAPKIVGPTLEAATQI
LEKAYSQQTRLEQGARKAHVEHFLSAPPSSSAPQYQRENLRLKLS
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