prot_H-paniculata_contig12.1267.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12.1267.1
Unique Nameprot_H-paniculata_contig12.1267.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length241
Homology
BLAST of mRNA_H-paniculata_contig12.1267.1 vs. uniprot
Match: D7G6B4_ECTSI (Rab11B, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B4_ECTSI)

HSP 1 Score: 368 bits (945), Expect = 2.780e-127
Identity = 198/240 (82.50%), Postives = 214/240 (89.17%), Query Frame = 0
Query:    1 MSSRPSSSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPSFKSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSAHYKRASGALLVFDVSSRSSFENAERVWLRELRNAADSNSSLMDCLVLVGNKIDLPNAEVPEAEQESSASRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGTGAAGAEQPGAPAPKEVPRGIVLTAASLKPAAPKDKTDIDCC 240
            M+SR  SSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKR R DGTVPSF+SDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITS+HYKRASGALLV+DV+SRSSFENAE+VWLREL+NAADSNSSL+D LVLVGNK+DLPNA+V EAEQESSA RMGLASSARVSAKTGQGVDKAFERLILRVYEVEHG G     Q  AP  +  P+GIVL  A+ KP A +DK  ++CC
Sbjct:    1 MASR--SSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPSFRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDLPNADVTEAEQESSAMRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRG-----QQAAPPKEAAPKGIVL--ATPKPRAEEDK--LECC 229          
BLAST of mRNA_H-paniculata_contig12.1267.1 vs. uniprot
Match: A0A6G0WZ29_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZ29_9STRA)

HSP 1 Score: 221 bits (562), Expect = 4.630e-69
Identity = 125/237 (52.74%), Postives = 162/237 (68.35%), Query Frame = 0
Query:   10 EYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPS---FKSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSAHYKRASGALLVFDVSSRSSFENAERVWLRELRNAADSNSSLMDCLVLVGNKIDL---PNAEVPEAEQESSASRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGTGAAGAEQPGAPAPKEVPRGIVLTAASLKPAAPKDKTDIDCC 240
            +YD L+K+VLVGD  VGKTNLLA +T+ +     D +  +   F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITS+HY+RA+GAL+V+DVSSRS+F+NA+  WL+ELRN+AD+NS+L+ CL+LVGNKIDL   P+  V   E   +A       S R SAKTGQ V +AFE+L++ VY  +    A   E   APAP      + L+A    PA PK K +  CC
Sbjct:    8 QYDELYKVVLVGDPGVGKTNLLAYFTATEDEMAIDSSTNASKIFSAVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRSTFDNAQSHWLKELRNSADTNSTLLSCLMLVGNKIDLAKDPSVSVVSQEDHDAAISEAGIMSIRASAKTGQNVVEAFEKLVIEVYNQDKARNAKPEE---APAPS-----VDLSA----PAPPKKKNN--CC 230          
BLAST of mRNA_H-paniculata_contig12.1267.1 vs. uniprot
Match: A0A485LBE8_9STRA (Aste57867_18857 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBE8_9STRA)

HSP 1 Score: 220 bits (560), Expect = 2.330e-68
Identity = 124/237 (52.32%), Postives = 164/237 (69.20%), Query Frame = 0
Query:   11 YDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPS---FKSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSAHYKRASGALLVFDVSSRSSFENAERVWLRELRNAADSNSSLMDCLVLVGNKIDL---PNAEV-PEAEQESSASRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGTGAAGAEQPGAPAPKEVPRGIVLTAASLKPAAPKDKTDIDCC 240
            YD L+K+VLVGD  VGKTNLLA +T+ D     D +  +   F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITS+HY+RA+GAL+V+DVSSR+SF+NA+  WL+ELRN+AD+NS+L+ CL+LVGNKIDL   P+ +V  E + +++ +  G     R SAKTGQ V +AFE+LI+ VY  +    A   + P A A       + L+A    PAA K K +  CC
Sbjct:   36 YDELYKVVLVGDPGVGKTNLLAYFTASDDEMAIDTSTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQSHWLKELRNSADTNSTLLSCLMLVGNKIDLALDPSVQVVAEEDHDAAVAAAGDVLGTRASAKTGQNVVEAFEKLIIEVYNQDKARNAKPVDVPAAAA-------VDLSA----PAAQKKKNN--CC 259          
BLAST of mRNA_H-paniculata_contig12.1267.1 vs. uniprot
Match: A0A024UAY6_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024UAY6_9STRA)

HSP 1 Score: 219 bits (557), Expect = 2.410e-68
Identity = 114/206 (55.34%), Postives = 152/206 (73.79%), Query Frame = 0
Query:   10 EYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPS---FKSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSAHYKRASGALLVFDVSSRSSFENAERVWLRELRNAADSNSSLMDCLVLVGNKIDLPNAEV---PEAEQESSASRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGTGAAGAEQPGA 209
            +YD L+K+VLVGD  VGKTNLLA +T+ D+    D +  +   F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITS+HY+RA+GAL+V+DVSSR+SF+NA+  WL+ELRN+AD+NS+L+ CL+LVGNKIDL  A+    PE  + +  +  G+    R SAKTGQ V +AFE+L++ VY  +    A   E+P A
Sbjct:    7 QYDELYKVVLVGDPGVGKTNLLAYFTASDEDMAIDASTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQGHWLKELRNSADTNSTLLSCLMLVGNKIDLDPADTVVTPEDHESAVLAADGILD-IRASAKTGQNVVEAFEKLVIEVYNQDKARNATPEEKPSA 211          
BLAST of mRNA_H-paniculata_contig12.1267.1 vs. uniprot
Match: A0A6S9ECQ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ECQ7_HETAK)

HSP 1 Score: 214 bits (544), Expect = 1.970e-66
Identity = 110/188 (58.51%), Postives = 143/188 (76.06%), Query Frame = 0
Query:    8 SLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPSFKSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSAHYKRASGALLVFDVSSRSSFENAERVWLRELRNAADSNSSLMDCLVLVGNKIDLPNAEVP-EAEQESSASRMGLASSARVSAKTGQGVDKAFERLILRVYE 194
            S +YD ++KIVLVGD  VGKTNLL+C+TS  K    +G V SF  +RK TVGVEFA+ +V HP+G RIKAQIWDTAGQERY AIT +HY+RA+GALLV+DV++R SF+NA+  WL+EL+ +ADS SSL++  +L GNKIDL +  V  +AEQ S+A+ +GL+     SA+ G  VD AFE LIL+VY+
Sbjct:   10 SEQYDVMYKIVLVGDPGVGKTNLLSCFTSYRKDTSENGAVVSFNENRKPTVGVEFASWIVKHPNGDRIKAQIWDTAGQERYNAITKSHYRRAAGALLVYDVTNRKSFDNAKNWWLKELKESADSESSLLENTLLCGNKIDLVDKRVVHDAEQASAAAGLGLSMHQSTSAREGTNVDDAFETLILQVYD 197          
BLAST of mRNA_H-paniculata_contig12.1267.1 vs. uniprot
Match: A0A1W0A2A3_9STRA (Rab11/RabA-family small GTPase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2A3_9STRA)

HSP 1 Score: 213 bits (541), Expect = 6.570e-66
Identity = 113/209 (54.07%), Postives = 152/209 (72.73%), Query Frame = 0
Query:   10 EYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPS---FKSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSAHYKRASGALLVFDVSSRSSFENAERVWLRELRNAADSNSSLMDCLVLVGNKIDLPNAE-----VPEAEQESSASRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGTGAAGAEQPGAP 210
            +YD L+K+VLVGD  VGKTNLLA +T+ ++    D    +   F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITS+HY+RA+GAL+V+DV+S+++FENA+  WL+ELRN+ADSNS+L+ CL+LVGNKIDL  A+     VP  + E++A   G+ +  R SAKTG+ V  AFE+LI+ VY  +    A  A +   P
Sbjct:    3 QYDELYKVVLVGDPGVGKTNLLAYFTATEEEMAMDAETNASKIFSAVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALVVYDVTSKATFENAQCHWLKELRNSADSNSTLLSCLMLVGNKIDLVAADNASTIVPPEDHEAAAKAEGVMAM-RASAKTGENVVAAFEQLIIEVYNQDKNRTAPVATESATP 210          
BLAST of mRNA_H-paniculata_contig12.1267.1 vs. uniprot
Match: A0A067CD03_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CD03_SAPPC)

HSP 1 Score: 212 bits (540), Expect = 9.020e-66
Identity = 110/192 (57.29%), Postives = 143/192 (74.48%), Query Frame = 0
Query:   10 EYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPSFK----SDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSAHYKRASGALLVFDVSSRSSFENAERVWLRELRNAADSNSSLMDCLVLVGNKIDLPN----AEVPEAEQESSASRMGLASSARVSAKTGQGVDKAFERLILRVY 193
            +YD L+K+VLVGD  VGKTNLLA +T+ ++    D +  + K    S RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITS+HY+RA+GAL+V+DVSSR++F+NA+  WL+ELRN+AD+NS+L+ CL+LVGNKIDL      A V  AE+  +A         R SAKTG+ V +AFE LI+ VY
Sbjct:    3 QYDELYKVVLVGDPGVGKTNLLAYFTATEEEMAVDASTNASKIFSSSVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALVVYDVSSRATFDNAQTHWLKELRNSADNNSTLLSCLMLVGNKIDLTEGINGAPVVAAEEHDAAMAAAGVHGVRASAKTGENVVQAFENLIIEVY 194          
BLAST of mRNA_H-paniculata_contig12.1267.1 vs. uniprot
Match: A0A024U937_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U937_9STRA)

HSP 1 Score: 209 bits (533), Expect = 3.590e-65
Identity = 108/187 (57.75%), Postives = 144/187 (77.01%), Query Frame = 0
Query:   10 EYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPS---FKSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSAHYKRASGALLVFDVSSRSSFENAERVWLRELRNAADSNSSLMDCLVLVGNKIDLPNAEV---PEAEQESSASRMGLASSARVSAKTGQGVDKAFERLIL 190
            +YD L+K+VLVGD  VGKTNLLA +T+ D+    D +  +   F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITS+HY+RA+GAL+V+DVSSR+SF+NA+  WL+ELRN+AD+NS+L+ CL+LVGNKIDL  A+    PE  + +  +  G+    R SAKTGQ V +AFE+L++
Sbjct:    7 QYDELYKVVLVGDPGVGKTNLLAYFTASDEDMAIDASTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQGHWLKELRNSADTNSTLLSCLMLVGNKIDLDPADTVVTPEDHESAVLAADGILD-IRASAKTGQNVVEAFEKLVI 192          
BLAST of mRNA_H-paniculata_contig12.1267.1 vs. uniprot
Match: A0A7S2XV75_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV75_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.410e-61
Identity = 104/185 (56.22%), Postives = 138/185 (74.59%), Query Frame = 0
Query:   11 YDYLFKIVLVGDAAVGKTNLLACYTSQDKR-PRADGTVPSFKSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSAHYKRASGALLVFDVSSRSSFENAERVWLRELRNAADSNSSLMDCLVLVGNKIDLPNAEVPEAEQESSASRMGLASSARVSAKTGQGVDKAFERLILRVYE 194
            +D  FKIVLVGD  VGKTNLLA YTS  K  P A     ++   RK TVGVEFAT +V HP G RIKAQIWDTAGQERY +I  +HY+RA+GA++V+DV+S+ +FENA+R WL++++++A  +S++M+C+ LVGNK DL  AEV EAE +++ + +GL    R SAKTG  VD+AFE+LI  VY+
Sbjct:   10 FDEQFKIVLVGDPGVGKTNLLAYYTSYRKGDPSA-----TYNEARKPTVGVEFATWIVRHPSGARIKAQIWDTAGQERYNSIVKSHYRRAAGAIVVYDVTSKKTFENAQRFWLQQIQDSASPDSNIMECITLVGNKTDL-QAEVTEAEHQTAMNSLGLPLEGRTSAKTGDNVDEAFEKLICLVYD 188          
BLAST of mRNA_H-paniculata_contig12.1267.1 vs. uniprot
Match: A0A2D4CD76_PYTIN (Rab family, other n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CD76_PYTIN)

HSP 1 Score: 200 bits (508), Expect = 7.300e-61
Identity = 110/242 (45.45%), Postives = 157/242 (64.88%), Query Frame = 0
Query:   10 EYDYLFKIVLVGDAAVGKTNLLACY-TSQDKRPRA---DGTVPSFKSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSAHYKRASGALLVFDVSSRSSFENAERVWLRELRNAADSNSSLMDCLVLVGNKIDLPNAE-------VPEAEQESSASRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGTGAAGAEQPGAPAPKEVPRGIVLTAASLKPAAPKDKTDIDCC 240
            +YD L+K+VLVGD AVGKTNLLA +  ++D +P      G    F S RK T+GVEF T ++ HP+GKR KAQIWDTAGQERYRAITS+HY+RA+GAL+V+DV++R+SFENA++ WL+EL+ +A  +S+L++C++LVGNK+DL   +       VP+   E +AS + + +  R SAKT   V KAFE LI+ +Y  + G               ++ R   + + +L+   P  K+   CC
Sbjct:    5 QYDELYKVVLVGDPAVGKTNLLASFLATEDNKPDTXDDQGQAKGFSSVRKPTIGVEFGTKIIHHPNGKRXKAQIWDTAGQERYRAITSSHYRRAAGALVVYDVTNRTSFENAQQHWLKELKASAXPSSTLLNCIMLVGNKVDLETPQSLQQPDSVPQEAHELAASELKVMNK-RTSAKTAFNVRKAFEELIISIYNEDKG---------------KLQRMATIRSITLEEPKPSGKSAKQCC 230          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12.1267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6B4_ECTSI2.780e-12782.50Rab11B, RAB family GTPase n=1 Tax=Ectocarpus silic... [more]
A0A6G0WZ29_9STRA4.630e-6952.74Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485LBE8_9STRA2.330e-6852.32Aste57867_18857 protein n=1 Tax=Aphanomyces stella... [more]
A0A024UAY6_9STRA2.410e-6855.34Uncharacterized protein n=5 Tax=Aphanomyces TaxID=... [more]
A0A6S9ECQ7_HETAK1.970e-6658.51Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1W0A2A3_9STRA6.570e-6654.07Rab11/RabA-family small GTPase n=1 Tax=Thraustothe... [more]
A0A067CD03_SAPPC9.020e-6657.29Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A024U937_9STRA3.590e-6557.75Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7S2XV75_9STRA1.410e-6156.22Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2D4CD76_PYTIN7.300e-6145.45Rab family, other n=1 Tax=Pythium insidiosum TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 15..36
score: 46.09
coord: 135..148
score: 46.38
coord: 170..192
score: 30.05
coord: 49..65
score: 28.64
coord: 68..90
score: 52.86
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 12..195
e-value: 8.4E-8
score: -1.0
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 17..195
e-value: 2.8E-11
score: 25.0
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 20..240
e-value: 9.7E-4
score: 4.8
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 15..195
e-value: 3.6E-51
score: 186.0
NoneNo IPR availableGENE3D3.40.50.300coord: 4..206
e-value: 2.7E-51
score: 175.7
NoneNo IPR availablePANTHERPTHR24073:SF1049coord: 9..222
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 9..222
NoneNo IPR availablePROSITEPS51419RABcoord: 10..240
score: 26.463
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 13..186
e-value: 1.1E-27
score: 94.8
IPR001806Small GTPasePFAMPF00071Rascoord: 16..192
e-value: 1.1E-39
score: 135.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 10..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12contigH-paniculata_contig12:1255..5614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12.1267.1mRNA_H-paniculata_contig12.1267.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12 1195..7436 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12.1267.1 ID=prot_H-paniculata_contig12.1267.1|Name=mRNA_H-paniculata_contig12.1267.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=241bp
MSSRPSSSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPSF
KSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSAHYKRAS
GALLVFDVSSRSSFENAERVWLRELRNAADSNSSLMDCLVLVGNKIDLPN
AEVPEAEQESSASRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGTG
AAGAEQPGAPAPKEVPRGIVLTAASLKPAAPKDKTDIDCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase